Sequence Description Alias PCC hrr AT1G74730 Protein of unknown function (DUF1118) 0.9153956567614208 3 AT4G21280 photosystem II subunit QA PSBQA, PSBQ-1, PSBQ 0.91298651606744 4 AT4G09010 ascorbate peroxidase 4 APX4, TL29 0.9100782704622377 3 AT3G55330 PsbP-like protein 1 PPL1 0.9044022589460071 4 AT1G43560 thioredoxin Y2 Aty2, ty2 0.9012054806140591 5 AT5G45680 FK506-binding protein 13 ATFKBP13, FKBP13 0.899863278988499 8 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.8948250756880383 15 AT4G09650 ATP synthase delta-subunit gene ATPD 0.8901750058562858 9 AT5G40950 ribosomal protein large subunit 27 RPL27 0.8901358513252441 18 AT1G50900 Ankyrin repeat family protein GDC1 0.8894299411658967 10 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein EDA3 0.886793654978279 11 AT2G20890 photosystem II reaction center PSB29 protein PSB29, THF1 0.8867860116719829 12 AT1G64510 Translation elongation factor EF1B/ribosomal protein S6 family protein 0.8808221475213532 23 AT3G46780 plastid transcriptionally active 16 PTAC16 0.8806349155405999 15 AT5G43750 NAD(P)H dehydrogenase 18 NDH18 0.8795965287342671 39 AT1G32470 Single hybrid motif superfamily protein 0.8785621112979893 16 AT4G02530 chloroplast thylakoid lumen protein 0.8776713178218853 23 AT1G20810 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8758925900062268 18 AT5G08050 Protein of unknown function (DUF1118) 0.8749138653665004 19 AT2G39470 PsbP-like protein 2 PPL2 0.8747597422744077 36 AT1G52220 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: photosystem I P subunit (TAIR:AT2G46820.2); Has 291 Blast hits to 291 proteins in 50 species: Archae - 0; Bacteria - 90; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). 0.8743124921976453 21 AT5G06290 2-cysteine peroxiredoxin B 2CPB, 2-Cys Prx B 0.8741329545761944 22 AT4G22830 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2499 (InterPro:IPR019634); Has 319 Blast hits to 317 proteins in 103 species: Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 108 (source: NCBI BLink). 0.8721735099154654 23 AT1G03630 protochlorophyllide oxidoreductase C POR C, PORC 0.8720228957076032 24 AT5G27290 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8695605188017147 25 AT1G54500 Rubredoxin-like superfamily protein 0.8661874848930785 26 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.865934336745054 27 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family protein 0.8648730722606183 28 AT2G01590 chlororespiratory reduction 3 CRR3 0.8639763742769491 29 AT3G54210 Ribosomal protein L17 family protein 0.8635354093427925 30 AT3G26060 Thioredoxin superfamily protein ATPRX Q 0.8629978741610388 31 AT3G25920 ribosomal protein L15 RPL15 0.8622874648666643 52 AT3G62030 rotamase CYP 4 ROC4 0.8615205015586097 33 AT5G52970 thylakoid lumen 15.0 kDa protein 0.8598325948638234 34 AT4G15510 Photosystem II reaction center PsbP family protein 0.8591106684276365 35 AT4G13500 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8583407112019292 36 AT1G19150 photosystem I light harvesting complex gene 6 LHCA2*1, LHCA6 0.858197163372013 37 AT2G28605 Photosystem II reaction center PsbP family protein 0.8572475592581293 38 AT4G25050 acyl carrier protein 4 ACP4 0.856800210293695 39 AT4G34190 stress enhanced protein 1 SEP1 0.8553906679424601 40 AT1G73060 Low PSII Accumulation 3 LPA3 0.8552621804420022 41 AT1G76450 Photosystem II reaction center PsbP family protein 0.8532968845315821 42 AT1G74070 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 0.8513028891698489 43 AT1G05190 Ribosomal protein L6 family emb2394 0.8509237348691048 56 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 FNR1, ATLFNR1 0.8502574750188131 76 AT1G52230 photosystem I subunit H2 PSAH2, PSI-H, PSAH-2 0.8497950519756898 46 AT3G59780 Rhodanese/Cell cycle control phosphatase superfamily protein 0.8494973782043179 47 AT3G54050 high cyclic electron flow 1 HCEF1 0.8490781025385153 77 AT1G68590 Ribosomal protein PSRP-3/Ycf65 0.8481453257817122 49 AT1G75350 Ribosomal protein L31 emb2184 0.8478014880700427 50 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 GAPA-2 0.8475628971612413 55 AT5G13510 Ribosomal protein L10 family protein 0.8475115810270183 52 AT4G01150 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). 0.847484004371528 53 AT1G11860 Glycine cleavage T-protein family 0.8472660634035311 61 AT1G32990 plastid ribosomal protein l11 PRPL11 0.8464234062718937 55 AT3G11630 Thioredoxin superfamily protein 0.8451271174208479 56 AT2G48070 resistance to phytophthora 1 RPH1 0.8443924108579078 57 AT1G44575 Chlorophyll A-B binding family protein NPQ4, PSBS 0.8439069767571021 58 AT1G44920 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3054 (InterPro:IPR021414); Has 246 Blast hits to 246 proteins in 119 species: Archae - 14; Bacteria - 181; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8438673220723131 59 AT3G47650 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8427291094006237 60 AT3G50820 photosystem II subunit O-2 OEC33, PSBO-2, PSBO2 0.8424393648077795 61 AT1G09340 chloroplast RNA binding CRB, HIP1.3, CSP41B 0.8423795548367146 68 AT3G26710 cofactor assembly of complex C CCB1 0.8410491329474777 63 AT3G56910 plastid-specific 50S ribosomal protein 5 PSRP5 0.8403045359981023 64 AT1G18730 NDH dependent flow 6 NDF6 0.8399020173439319 65 AT3G12345 unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). 0.8391407692149172 66 AT1G14345 NAD(P)-linked oxidoreductase superfamily protein 0.8382755522390068 67 AT4G18370 DEGP protease 5 HHOA, DEG5, DEGP5 0.8381294008275 68 AT2G30170 Protein phosphatase 2C family protein 0.8375724245484073 69 AT2G44920 Tetratricopeptide repeat (TPR)-like superfamily protein 0.836355608494944 70 AT1G20340 Cupredoxin superfamily protein DRT112, PETE2 0.8360303213481705 71 AT1G75690 DnaJ/Hsp40 cysteine-rich domain superfamily protein 0.8354028407385117 72 AT3G51510 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 42 Blast hits to 42 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). 0.8330825612538305 73 AT3G16140 photosystem I subunit H-1 PSAH-1 0.8324443862213017 74 AT3G55800 sedoheptulose-bisphosphatase SBPASE 0.8318935420246679 97 AT2G46820 photosystem I P subunit PTAC8, TMP14, PSI-P, PSAP 0.8317922377885585 76 AT5G14320 Ribosomal protein S13/S18 family 0.8305510780834292 77 AT1G03600 photosystem II family protein PSB27 0.8304415000426866 78 AT4G39710 FK506-binding protein 16-2 FKBP16-2 0.8284578506859562 79 AT5G38410 Ribulose bisphosphate carboxylase (small chain) family protein 0.8277505132889086 80 AT3G01480 cyclophilin 38 ATCYP38, CYP38 0.827441134989052 81 AT5G36120 cofactor assembly, complex C (B6F) CCB3, atylmg3, YLMG3 0.8272016080809882 82 AT5G07020 proline-rich family protein 0.8267183212113967 83 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 APL1, ADG2 0.8266973417699212 84 AT3G02730 thioredoxin F-type 1 ATF1, TRXF1 0.8262059291578817 85 AT4G11175 Nucleic acid-binding, OB-fold-like protein 0.8256580106442012 86 AT4G24930 thylakoid lumenal 17.9 kDa protein, chloroplast 0.8251913012678679 87 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8238814992761182 88 AT5G53580 NAD(P)-linked oxidoreductase superfamily protein 0.8234796626623382 89 AT3G52150 RNA-binding (RRM/RBD/RNP motifs) family protein 0.8233140228792598 90 AT2G06520 photosystem II subunit X PSBX 0.8233136532969613 91 AT3G12685 Acid phosphatase/vanadium-dependent haloperoxidase-related protein 0.8228459250855998 92 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8220381298526904 93 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). 0.8214801463514879 94 AT2G35370 glycine decarboxylase complex H GDCH 0.8210601752830806 95 AT5G16710 dehydroascorbate reductase 1 DHAR3 0.8202570794445182 96 AT3G16250 NDH-dependent cyclic electron flow 1 NDF4 0.8201427111467211 97 AT5G08650 Small GTP-binding protein 0.8182456398894867 98 AT2G21530 SMAD/FHA domain-containing protein 0.8180444098350937 99 AT3G56010 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). 0.8163479907824265 100