Sequence Description Alias PCC hrr AMTR_s00010p00149200 Phytohormones.auxin.synthesis.indole-3-acetamide (IAM) pathway.indole-3-acetamide hydrolase evm_27.TU.AmTr_v1.0_scaffold00010.107 0.9274574010043036 1 AMTR_s00067p00046000 Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.27 0.9261711105190057 2 AMTR_s00061p00127300 Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.103 0.9126134832484594 3 AMTR_s00029p00146380 evm_27.TU.AmTr_v1.0_scaffold00029.171 0.9111466882934239 4 AMTR_s00014p00128310 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate decarboxylase evm_27.TU.AmTr_v1.0_scaffold00014.46 0.9022232544236958 50 AMTR_s00071p00100010 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00071.77 0.897391770123001 65 AMTR_s00050p00185440 Pentatricopeptide repeat-containing protein At2g41080 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00050.48 0.8948030827094687 7 AMTR_s00038p00132760 Pentatricopeptide repeat-containing protein At3g54980, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.77 0.892060317971509 8 AMTR_s00104p00092530 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.35 0.8915310693297289 33 AMTR_s00155p00043060 Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate synthesis.methylthioalkylmalate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00155.21 0.890654078783642 44 AMTR_s00038p00071780 Pentatricopeptide repeat-containing protein At3g26540 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.30 0.8904430055906534 52 AMTR_s00012p00252410 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component evm_27.TU.AmTr_v1.0_scaffold00012.260 0.8875474661753092 98 AMTR_s00095p00020800 Pentatricopeptide repeat-containing protein At1g15480, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.5 0.8866576608347083 24 AMTR_s00004p00168690 Nucleotide metabolism.pyrimidines.catabolism.5-nucleotidase evm_27.TU.AmTr_v1.0_scaffold00004.187 0.8858951924371659 14 AMTR_s00107p00047780 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).linker subcomplex.NUP93 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00107.18 0.8850666284913471 36 AMTR_s00002p00201330 evm_27.TU.AmTr_v1.0_scaffold00002.190 0.8835480308887804 16 AMTR_s00003p00149890 DNA damage response.DNA repair mechanisms.base excision repair (BER).flap structure-specific endonuclease (FEN1) evm_27.TU.AmTr_v1.0_scaffold00003.122 0.883297770186226 56 AMTR_s00095p00019470 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.6 0.8805929782247386 34 AMTR_s00012p00087690 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.41 0.8795962930559256 19 AMTR_s00002p00194810 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component evm_27.TU.AmTr_v1.0_scaffold00002.176 0.8784053253308554 100 AMTR_s00003p00261700 Pentatricopeptide repeat-containing protein At1g73710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.347 0.8776030984957695 21 AMTR_s00072p00157670 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.PES component evm_27.TU.AmTr_v1.0_scaffold00072.97 0.8773194600527211 94 AMTR_s00029p00242040 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).UV-damaged DNA-binding protein (UV-DDB) heterodimer.DDB2 component evm_27.TU.AmTr_v1.0_scaffold00029.419 0.8735451294949285 25 AMTR_s00037p00204590 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.arogenate dehydratase (ADT) evm_27.TU.AmTr_v1.0_scaffold00037.103 0.8728567528966633 49 AMTR_s00037p00206460 Cellular respiration.glycolysis.methylglyoxal degradation.GLX1 lactoyl-glutathione lyase evm_27.TU.AmTr_v1.0_scaffold00037.106 0.8714176790646154 71 AMTR_s00040p00044580 evm_27.TU.AmTr_v1.0_scaffold00040.21 0.8706855209916124 46 AMTR_s00021p00105410 RNA processing.organelle machineries.RNA editing.MORF-type RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00021.53 0.8696791156738152 72 AMTR_s00088p00132770 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HPE1 splicing factor evm_27.TU.AmTr_v1.0_scaffold00088.99 0.8692612687722305 31 AMTR_s00003p00265190 Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycosylation.AGP beta-1,6-glucuronosyltransferase evm_27.TU.AmTr_v1.0_scaffold00003.366 0.8690043616265261 33 AMTR_s00016p00115350 Pentatricopeptide repeat-containing protein At5g13270, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.76 0.8678599649038515 36 AMTR_s00021p00234100 SUN domain-containing protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.233 0.8675453285246629 48 AMTR_s00095p00023580 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.6 0.866787000534064 41 AMTR_s00049p00163880 Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.150 0.864908289921602 44 AMTR_s00097p00038600 Thylakoid lumenal 15.0 kDa protein 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00097.9 0.864761791955419 45 AMTR_s00031p00027380 Cell cycle.organelle machineries.organelle fission.plastid division.FtsZ prokaryotic-tubulin filaments.FtsZ2 component evm_27.TU.AmTr_v1.0_scaffold00031.4 0.8611208557570628 51 AMTR_s00033p00075910 evm_27.TU.AmTr_v1.0_scaffold00033.33 0.860852431401827 66 AMTR_s00045p00136300 Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.137 0.8607293501695041 53 AMTR_s00006p00254180 RNA biosynthesis.organelle machineries.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP) evm_27.TU.AmTr_v1.0_scaffold00006.176 0.8598396535547589 56 AMTR_s00007p00244990 evm_27.TU.AmTr_v1.0_scaffold00007.262 0.8597064181639386 65 AMTR_s00061p00213950 RNA processing.RNA modification.rRNA/tRNA methylation.TRM10 tRNA guanosine-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00061.266 0.8588220778288662 59 AMTR_s00058p00112040 Prohibitin-1, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.65 0.8577551477105385 83 AMTR_s00019p00211360 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC4 component evm_27.TU.AmTr_v1.0_scaffold00019.256 0.8528251010535246 91 AMTR_s00032p00147450 Anaphase-promoting complex subunit 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.113 0.8524241583309353 75 AMTR_s00021p00227450 Protein DEFECTIVE IN MERISTEM SILENCING 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.222 0.8516181744489445 80 AMTR_s00177p00046490 Enzyme classification.EC_1 oxidoreductases.EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor evm_27.TU.AmTr_v1.0_scaffold00177.21 0.8516022850096371 80 AMTR_s00029p00204910 Pentatricopeptide repeat-containing protein At4g19191, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.293 0.851332486245233 83 AMTR_s00026p00065580 Nutrient uptake.nitrogen assimilation.aspartate aminotransferase evm_27.TU.AmTr_v1.0_scaffold00026.21 0.8503472684903732 84 AMTR_s00066p00189300 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UPT6 assembly factor evm_27.TU.AmTr_v1.0_scaffold00066.240 0.8496641845633047 86 AMTR_s00030p00241220 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NOG1 regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00030.211 0.8489515409368753 88 AMTR_s00069p00131410 U-box domain-containing protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.93 0.8488191641493723 91 AMTR_s00024p00200150 YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.175 0.8486602721969472 92 AMTR_s00019p00155840 evm_27.TU.AmTr_v1.0_scaffold00019.145 0.8478001137257001 96 AMTR_s00039p00150510 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatB component evm_27.TU.AmTr_v1.0_scaffold00039.103 0.8477172223057311 97 AMTR_s00077p00031710 Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.15 0.8470473010380347 99