Sequence Description Alias PCC hrr AMTR_s00102p00095780 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00102.50 0.9468373546396485 2 AMTR_s00003p00020850 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.6 0.9467281448293097 2 AMTR_s00069p00119460 Probable transcriptional regulator SLK2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.80 0.9378517311291011 7 AMTR_s00109p00054710 Solute transport.primary active transport.V-type ATPase complex.peripheral V1 subcomplex.subunit B evm_27.TU.AmTr_v1.0_scaffold00109.40 0.9372039605475148 4 AMTR_s00109p00121860 evm_27.TU.AmTr_v1.0_scaffold00109.121 0.9353029178068615 5 AMTR_s00039p00218660 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.alpha subcomplex.NDUFA9 component evm_27.TU.AmTr_v1.0_scaffold00039.189 0.9347426446354187 6 AMTR_s00007p00259060 Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.316 0.9341205655244238 7 AMTR_s00029p00208280 Cell wall.sporopollenin.exine wall formation.DEX1 exine patterning factor evm_27.TU.AmTr_v1.0_scaffold00029.300 0.9294972577665197 11 AMTR_s00044p00148910 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.EH component evm_27.TU.AmTr_v1.0_scaffold00044.153 0.9285075848651345 9 AMTR_s00032p00047690 evm_27.TU.AmTr_v1.0_scaffold00032.26 0.9280861275192115 11 AMTR_s00092p00100450 Coenzyme metabolism.prenylquinone synthesis.plastoquinone synthesis.SPS3 solanesyl diphosphate synthase evm_27.TU.AmTr_v1.0_scaffold00092.58 0.9279130102013692 11 AMTR_s00030p00083820 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii evm_27.TU.AmTr_v1.0_scaffold00030.33 0.9277558596054095 31 AMTR_s00114p00022520 ACT domain-containing protein ACR12 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00114.8 0.9274059880462597 13 AMTR_s00002p00059110 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00002.23 0.9259999231015835 14 AMTR_s00077p00108970 evm_27.TU.AmTr_v1.0_scaffold00077.94 0.9242850342466556 15 AMTR_s00003p00101050 evm_27.TU.AmTr_v1.0_scaffold00003.65 0.9240071937882899 48 AMTR_s00044p00164390 Histone-binding protein MSI1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.179 0.9227048738298911 32 AMTR_s00003p00122400 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctionial hydroxyacyl-CoA dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00003.89 0.9211755140062641 48 AMTR_s00059p00212210 evm_27.TU.AmTr_v1.0_scaffold00059.248 0.9210043854123044 19 AMTR_s00122p00094620 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00122.38 0.9204217972100365 37 AMTR_s00071p00153630 Ran-binding protein M homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.142 0.9202295756099722 21 AMTR_s00175p00030950 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00175.7 0.9197989901669302 22 AMTR_s00105p00039650 evm_27.TU.AmTr_v1.0_scaffold00105.16 0.9191038597231963 23 AMTR_s00170p00040980 Cellular respiration.pyruvate oxidation.mitochondrial pyruvate dehydrogenase complex.E2 component evm_27.TU.AmTr_v1.0_scaffold00170.18 0.9187667932178912 24 AMTR_s00175p00061780 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00175.34 0.9178946355797459 25 AMTR_s00021p00078920 Protein modification.phosphorylation.SCY1 kinase evm_27.TU.AmTr_v1.0_scaffold00021.35 0.9162850413569072 26 AMTR_s00076p00017680 Amino acid metabolism.degradation.branched-chain amino acid.leucine.methylcrotonoyl-CoA carboxylase complex.beta subunit evm_27.TU.AmTr_v1.0_scaffold00076.3 0.9162234401402698 27 AMTR_s00036p00173790 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00036.85 0.9148883517852163 44 AMTR_s00036p00239020 Chromatin organisation.histone modifications.histone arginine methylation.PRMT1 histone methylase evm_27.TU.AmTr_v1.0_scaffold00036.188 0.9143390407854909 29 AMTR_s00009p00247290 Phytohormones.jasmonic acid.synthesis.acyl-CoA thioesterase evm_27.TU.AmTr_v1.0_scaffold00009.243 0.9138410454110424 30 AMTR_s00131p00040500 Small RNA degrading nuclease 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00131.25 0.9130857499499402 57 AMTR_s00050p00180490 Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00050.40 0.9109795040700012 59 AMTR_s00024p00216120 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP7 assembly factor evm_27.TU.AmTr_v1.0_scaffold00024.201 0.9108857296282362 45 AMTR_s00008p00163370 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec23 component evm_27.TU.AmTr_v1.0_scaffold00008.84 0.9108573495788747 34 AMTR_s00045p00078520 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-VIII kinase families.RLCK-VIII kinase evm_27.TU.AmTr_v1.0_scaffold00045.69 0.9102227079408813 35 AMTR_s00057p00152610 evm_27.TU.AmTr_v1.0_scaffold00057.140 0.910046977769211 36 AMTR_s00016p00139220 Solute transport.primary active transport.V-type ATPase complex.peripheral V1 subcomplex.subunit C evm_27.TU.AmTr_v1.0_scaffold00016.97 0.9096899794003083 37 AMTR_s00057p00039750 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKD/CDK7 kinase evm_27.TU.AmTr_v1.0_scaffold00057.19 0.9096526381935454 38 AMTR_s00088p00115810 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate synthetase evm_27.TU.AmTr_v1.0_scaffold00088.82 0.9095420001877969 49 AMTR_s00063p00100200 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.17 0.9095395871608583 44 AMTR_s00091p00037050 Protein modification.phosphorylation.AGC kinase superfamily.MAST kinase evm_27.TU.AmTr_v1.0_scaffold00091.6 0.9093272600167114 41 AMTR_s00001p00229100 RNA processing.RNA 3-end polyadenylation.Cleavage Stimulatory Factor (CstF) complex.CstF64/Rna15 component evm_27.TU.AmTr_v1.0_scaffold00001.240 0.9083424046829681 42 AMTR_s00176p00054790 Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00176.28 0.9074476249287832 81 AMTR_s00041p00192380 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00041.165 0.9067217544332318 44 AMTR_s00111p00143180 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.123 0.9066648719224354 45 AMTR_s00059p00105450 evm_27.TU.AmTr_v1.0_scaffold00059.80 0.906001101825712 47 AMTR_s00001p00246890 evm_27.TU.AmTr_v1.0_scaffold00001.300 0.9055107887693153 48 AMTR_s00025p00248490 Cytoskeleton.microfilament network.actin polymerisation.villin actin-crosslinking factor evm_27.TU.AmTr_v1.0_scaffold00025.405 0.9052653925324715 49 AMTR_s00066p00096020 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase GDP-dissociation inhibitor (RAB-GDI) evm_27.TU.AmTr_v1.0_scaffold00066.78 0.9049913361233793 52 AMTR_s00065p00185540 Protein modification.N-linked glycosylation.complex N-glycan maturation.class-II glucosidase II complex.subunit alpha evm_27.TU.AmTr_v1.0_scaffold00065.158 0.9049517446918391 53 AMTR_s00009p00262150 RNA processing.RNA decay.exosome complex.EXO9 core complex.RRP40 component evm_27.TU.AmTr_v1.0_scaffold00009.345 0.9034807590731602 54 AMTR_s00099p00018620 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component evm_27.TU.AmTr_v1.0_scaffold00099.5 0.9032264017341962 55 AMTR_s00303p00010520 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00303.1 0.9028399509479429 56 AMTR_s00096p00019400 Pentatricopeptide repeat-containing protein At5g11310, mitochondrial OS=Arabidopsis thaliana 0.9028180604751564 57 AMTR_s00046p00164820 Protein modification.acetylation.NatC-type N-terminal acetylase complex.NAA35 auxiliary component evm_27.TU.AmTr_v1.0_scaffold00046.88 0.9028046904004826 91 AMTR_s00016p00254170 evm_27.TU.AmTr_v1.0_scaffold00016.320 0.9027295412955055 59 AMTR_s00040p00228310 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP2A large alpha subunit evm_27.TU.AmTr_v1.0_scaffold00040.272 0.9018137107839823 62 AMTR_s00029p00094300 RNA processing.RNA quality control Exon Junction complex (EJC).core components.eIF4A3 helicase component evm_27.TU.AmTr_v1.0_scaffold00029.87 0.9013092858234721 64 AMTR_s00052p00172760 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS35 component evm_27.TU.AmTr_v1.0_scaffold00052.82 0.9008686984771055 65 AMTR_s00147p00036340 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00147.15 0.9007715935987136 90 AMTR_s00176p00021290 Protein modification.peptide maturation.endomembrane system.gamma secretase complex.NCT component evm_27.TU.AmTr_v1.0_scaffold00176.4 0.9004661526880483 77 AMTR_s00019p00154210 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ21/22 splicing factor evm_27.TU.AmTr_v1.0_scaffold00019.143 0.8999781586531231 68 AMTR_s00010p00086200 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF2 component evm_27.TU.AmTr_v1.0_scaffold00010.48 0.8999632974025107 90 AMTR_s00039p00212570 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.MAC3 component evm_27.TU.AmTr_v1.0_scaffold00039.183 0.8993004605054125 71 AMTR_s00076p00078090 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00076.20 0.8991163700651226 73 AMTR_s00109p00116730 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.assembly phase.adrenodoxin oxidoreductase component evm_27.TU.AmTr_v1.0_scaffold00109.115 0.8990609979038384 74 AMTR_s00001p00249260 evm_27.TU.AmTr_v1.0_scaffold00001.310 0.8986497087373937 78 AMTR_s00068p00188520 MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00068.151 0.8979688273629094 80 AMTR_s00071p00144670 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.UAfT nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00071.130 0.8979273974242883 85 AMTR_s00032p00029730 Alpha N-terminal protein methyltransferase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.11 0.8979194146320691 82 AMTR_s00111p00041460 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3a component evm_27.TU.AmTr_v1.0_scaffold00111.21 0.8979118710032101 83 AMTR_s00052p00179090 RNA processing.RNA modification.rRNA/tRNA methylation.TRM140 tRNA cytidine-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00052.84 0.8972838788387586 84 AMTR_s00046p00225460 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.SymRK/DMI2 receptor kinase evm_27.TU.AmTr_v1.0_scaffold00046.162 0.8972434730108775 85 AMTR_s00137p00010410 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade I phosphatase evm_27.TU.AmTr_v1.0_scaffold00137.1 0.8972170713034995 86 AMTR_s00019p00154740 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp43 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00019.144 0.8971277383192158 87 AMTR_s00049p00056110 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP72 component evm_27.TU.AmTr_v1.0_scaffold00049.32 0.8969690861025175 88 AMTR_s00109p00033810 Vesicle trafficking.endomembrane trafficking.vacuolar sorting.AP-4 vacuole cargo adaptor complex.AP4B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00109.22 0.8965616490747098 91 AMTR_s00014p00250090 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit evm_27.TU.AmTr_v1.0_scaffold00014.130 0.8961188395249887 93 AMTR_s00142p00013680 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.beta2 subunit evm_27.TU.AmTr_v1.0_scaffold00142.4 0.8955413212803989 95 AMTR_s00057p00205760 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN3 regulatory component evm_27.TU.AmTr_v1.0_scaffold00057.246 0.894821885134995 98 AMTR_s00044p00137040 Solute transport.channels.GLR ligand-gated cation channel evm_27.TU.AmTr_v1.0_scaffold00044.128 0.8944613529050774 100