Sequence Description Alias PCC hrr AMTR_s00002p00266990 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED14 component evm_27.TU.AmTr_v1.0_scaffold00002.516 0.9399895119585442 1 AMTR_s00060p00033670 Multi-process regulation.TOR signalling pathway.TORC complex.TOR kinase component evm_27.TU.AmTr_v1.0_scaffold00060.9 0.9383178673426666 9 AMTR_s00048p00149840 Pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.102 0.9334383217058713 11 AMTR_s00002p00260810 DNA damage-binding protein 1 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.446 0.9329846551455528 4 AMTR_s00019p00148170 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein evm_27.TU.AmTr_v1.0_scaffold00019.136 0.9289462108533252 16 AMTR_s00009p00067490 Pumilio homolog 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.20 0.9280904997656613 6 AMTR_s01224p00002240 evm_27.TU.AmTr_v1.0_scaffold01224.1 0.9274305474978015 11 AMTR_s00198p00028070 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED13 component evm_27.TU.AmTr_v1.0_scaffold00198.5 0.9256003812166733 16 AMTR_s00060p00196600 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED23 component evm_27.TU.AmTr_v1.0_scaffold00060.141 0.9225533022947603 49 AMTR_s00028p00193460 Phytohormones.cytokinin.perception and signal transduction.AHK-type receptor evm_27.TU.AmTr_v1.0_scaffold00028.85 0.9207699641129998 32 AMTR_s00041p00141370 evm_27.TU.AmTr_v1.0_scaffold00041.101 0.9190404617352738 65 AMTR_s00077p00193670 Cell cycle.cytokinesis.preprophase microtubule organization.MOR1 microtubule-associated protein evm_27.TU.AmTr_v1.0_scaffold00077.237 0.915779719103651 40 AMTR_s00048p00233710 evm_27.TU.AmTr_v1.0_scaffold00048.233 0.9154176952414294 30 AMTR_s00078p00192630 evm_27.TU.AmTr_v1.0_scaffold00078.201 0.9132345525882314 22 AMTR_s00106p00133350 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component evm_27.TU.AmTr_v1.0_scaffold00106.104 0.9098474138485626 70 AMTR_s00046p00089870 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component evm_27.TU.AmTr_v1.0_scaffold00046.46 0.9097889947598129 82 AMTR_s00197p00030350 Nutrient uptake.copper uptake.regulation.SPL7 copper homeostasis regulator evm_27.TU.AmTr_v1.0_scaffold00197.11 0.909141784625543 19 AMTR_s00091p00055470 evm_27.TU.AmTr_v1.0_scaffold00091.13 0.9079556469080099 63 AMTR_s00040p00210200 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Pcf11 component evm_27.TU.AmTr_v1.0_scaffold00040.222 0.90728775134306 62 AMTR_s00140p00029580 RNA biosynthesis.transcriptional activation.PHD finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00140.6 0.9070349845462011 69 AMTR_s00126p00106330 Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG2 component evm_27.TU.AmTr_v1.0_scaffold00126.49 0.9065300670827858 95 AMTR_s00007p00263470 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.340 0.9064304662276581 36 AMTR_s00022p00247220 Redox homeostasis.reactive oxygen generation.xanthine dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00022.369 0.9057691016316384 25 AMTR_s00009p00202340 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.129 0.905102683183559 45 AMTR_s00110p00152340 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-II complex-specific components.TRS130/CLUB component evm_27.TU.AmTr_v1.0_scaffold00110.129 0.9040990288765746 28 AMTR_s00033p00242600 Protein modification.phosphorylation.CAMK kinase superfamily.SNF1-related SnRK2 kinase evm_27.TU.AmTr_v1.0_scaffold00033.261 0.9028986671914109 71 AMTR_s00059p00210260 evm_27.TU.AmTr_v1.0_scaffold00059.244 0.9005668015132625 33 AMTR_s00142p00090900 evm_27.TU.AmTr_v1.0_scaffold00142.59 0.9005529316081009 44 AMTR_s00013p00152000 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00013.78 0.9005363031525798 65 AMTR_s00009p00267690 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.CPL1/2 phosphatase evm_27.TU.AmTr_v1.0_scaffold00009.409 0.8999494674679748 57 AMTR_s00022p00020890 evm_27.TU.AmTr_v1.0_scaffold00022.6 0.8998839687229616 88 AMTR_s00101p00125820 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00101.99 0.8988282497514068 40 AMTR_s00044p00165320 evm_27.TU.AmTr_v1.0_scaffold00044.180 0.898250103292334 41 AMTR_s00110p00107430 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.66 0.8978432317944863 42 AMTR_s00031p00010980 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA3 component evm_27.TU.AmTr_v1.0_scaffold00031.1 0.8969981024827135 44 AMTR_s00029p00079800 RNA biosynthesis.transcriptional activation.HUA2 transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.74 0.8967962588840159 45 AMTR_s00048p00035310 evm_27.TU.AmTr_v1.0_scaffold00048.9 0.8959828324115918 46 AMTR_s00041p00031550 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor evm_27.TU.AmTr_v1.0_scaffold00041.15 0.895701710692229 47 AMTR_s00061p00204480 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase 0.8953072394317221 55 AMTR_s00081p00135280 evm_27.TU.AmTr_v1.0_scaffold00081.50 0.8943523921919123 68 AMTR_s00066p00146980 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase-activating protein (RAB-GAP) evm_27.TU.AmTr_v1.0_scaffold00066.149 0.8937206057113349 75 AMTR_s00029p00083380 evm_27.TU.AmTr_v1.0_scaffold00029.77 0.8935779223789451 53 AMTR_s03799p00000720 evm_27.TU.AmTr_v1.0_scaffold03799.1 0.8934269132320327 54 AMTR_s00110p00115240 External stimuli response.biotic stress.pathogen effector.NLR effector receptor 0.8919361695799172 85 AMTR_s00059p00199900 Protein modification.phosphorylation.atypical kinase families.PIKK kinase evm_27.TU.AmTr_v1.0_scaffold00059.222 0.8890232469603201 64 AMTR_s00003p00258520 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-II complex-specific components.TRS130/CLUB component evm_27.TU.AmTr_v1.0_scaffold00003.322 0.888844098801873 65 AMTR_s00049p00185400 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.maintenance and regulation.TNO1 tethering factor 0.8886731114389549 67 AMTR_s00090p00148990 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00090.83 0.8884115340270098 68 AMTR_s00078p00166420 Protein degradation.peptidase families.metallopeptidase activities.carboxypeptidase activities.SOL carboxypeptidase evm_27.TU.AmTr_v1.0_scaffold00078.156 0.8878334658648326 70 AMTR_s00040p00140300 evm_27.TU.AmTr_v1.0_scaffold00040.108 0.8859139719707724 81 AMTR_s00106p00148070 evm_27.TU.AmTr_v1.0_scaffold00106.122 0.885614939775256 73 AMTR_s00058p00137050 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HOX-like transcription factor evm_27.TU.AmTr_v1.0_scaffold00058.101 0.8847703706535629 76 AMTR_s00007p00065880 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase C activities.PI-PLC-type phospholipase C evm_27.TU.AmTr_v1.0_scaffold00007.34 0.884073851677803 78 AMTR_s00091p00054030 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00091.11 0.8839631311417648 79 AMTR_s00145p00081540 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.MON1-CCZ1 RAB7 guanine nucleotide exchange factor complex.MON1/SAND component evm_27.TU.AmTr_v1.0_scaffold00145.30 0.8838406944654648 82 AMTR_s00069p00185250 BEACH domain-containing protein C2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.184 0.8836027425963299 81 AMTR_s00078p00187540 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.193 0.8834633835450445 82 AMTR_s00016p00090240 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKG kinase evm_27.TU.AmTr_v1.0_scaffold00016.51 0.8826671720586025 91 AMTR_s00209p00021130 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00209.2 0.8823964221426702 86 AMTR_s00009p00176380 Actin-related protein 9 OS=Oryza sativa subsp. indica evm_27.TU.AmTr_v1.0_scaffold00009.107 0.8821826855290826 88 AMTR_s00059p00037210 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.20 0.8818469361504112 90 AMTR_s00023p00182890 evm_27.TU.AmTr_v1.0_scaffold00023.121 0.8817993434119795 91 AMTR_s00032p00061960 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKC kinase evm_27.TU.AmTr_v1.0_scaffold00032.39 0.8812154069391315 95 AMTR_s00100p00078730 RNA biosynthesis.transcriptional activation.bHLH transcription factor evm_27.TU.AmTr_v1.0_scaffold00100.19 0.8809249777966276 96 AMTR_s00002p00268390 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.GCN5/ADA4 component evm_27.TU.AmTr_v1.0_scaffold00002.536 0.8800372116898634 99 AMTR_s00099p00142540 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpX chaperone component evm_27.TU.AmTr_v1.0_scaffold00099.130 0.8798526212875444 100