Sequence Description Alias PCC hrr AMTR_s00085p00089520 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.PIE1 ATPase component evm_27.TU.AmTr_v1.0_scaffold00085.48 0.9388814178936479 4 AMTR_s00060p00127160 evm_27.TU.AmTr_v1.0_scaffold00060.67 0.9369301334084958 2 AMTR_s00029p00206820 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI2 RNA helicase component evm_27.TU.AmTr_v1.0_scaffold00029.298 0.9289559115770272 34 AMTR_s00022p00221290 Clustered mitochondria protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.278 0.9263403968159843 34 AMTR_s00082p00059940 Protein RST1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00082.4 0.9253713493903652 55 AMTR_s00126p00106330 Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG2 component evm_27.TU.AmTr_v1.0_scaffold00126.49 0.9249095895559571 32 AMTR_s00008p00099050 evm_27.TU.AmTr_v1.0_scaffold00008.35 0.9240025992935501 7 AMTR_s00033p00026050 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) evm_27.TU.AmTr_v1.0_scaffold00033.11 0.9219195750321086 16 AMTR_s00049p00191680 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).transmembrane ring.GP210 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00049.202 0.9158908091722661 66 AMTR_s00087p00144100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00087.47 0.9153786863070473 72 AMTR_s00061p00182640 RNA processing.organelle machineries.ribonuclease activities.RNase E endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00061.204 0.9127723516377473 57 AMTR_s00067p00176230 Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00067.180 0.9109599526507877 12 AMTR_s00092p00062310 Coenzyme metabolism.NAD/NADP biosynthesis.NAD synthase evm_27.TU.AmTr_v1.0_scaffold00092.27 0.9101974428834299 51 AMTR_s00057p00026390 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii evm_27.TU.AmTr_v1.0_scaffold00057.10 0.9101351314958963 14 AMTR_s00046p00160890 RNA biosynthesis.transcriptional activation.BSD transcription factor evm_27.TU.AmTr_v1.0_scaffold00046.85 0.9085066466991956 15 AMTR_s00106p00133350 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component evm_27.TU.AmTr_v1.0_scaffold00106.104 0.907640347842152 79 AMTR_s00007p00173730 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.KA120 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00007.136 0.9071579889042783 52 AMTR_s00002p00207490 evm_27.TU.AmTr_v1.0_scaffold00002.209 0.9052321557756042 22 AMTR_s00029p00102340 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40C pre-mRNA-processing protein evm_27.TU.AmTr_v1.0_scaffold00029.99 0.9048114067677976 24 AMTR_s00022p00045270 evm_27.TU.AmTr_v1.0_scaffold00022.25 0.9046428267202128 82 AMTR_s00140p00029580 RNA biosynthesis.transcriptional activation.PHD finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00140.6 0.9041179781646528 78 AMTR_s00027p00246350 Chaperone protein dnaJ GFA2, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.153 0.9024280890413772 33 AMTR_s00002p00079350 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.VIR regulatory component evm_27.TU.AmTr_v1.0_scaffold00002.39 0.9023969242465147 51 AMTR_s00048p00141020 Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.89 0.9019288779228755 49 AMTR_s00015p00090420 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL/KDM1 lysine-specific demethylase evm_27.TU.AmTr_v1.0_scaffold00015.20 0.90182839389528 32 AMTR_s00022p00128600 RNA biosynthesis.transcriptional activation.ARID transcription factor evm_27.TU.AmTr_v1.0_scaffold00022.121 0.9014947928498885 33 AMTR_s00012p00135630 Protein modification.phosphorylation.atypical kinase families.RIO kinase evm_27.TU.AmTr_v1.0_scaffold00012.69 0.899374773213882 86 AMTR_s00020p00187990 evm_27.TU.AmTr_v1.0_scaffold00020.72 0.8989286185781471 37 AMTR_s00009p00259730 DNA damage response.DNA repair mechanisms.mismatch repair (MMR).MSH2-x mismatch repair heterodimers.MSH3 component evm_27.TU.AmTr_v1.0_scaffold00009.314 0.8989023238640451 59 AMTR_s00029p00214000 Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.316 0.8986463805038994 39 AMTR_s00010p00250130 RNA processing.RNA modification.pseudouridylation.TruA-type tRNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00010.350 0.8983809144984213 40 AMTR_s00024p00018770 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.bacterial elicitor response.non-canonical heterotrimeric G-protein complex.XLG atypical G-alpha component evm_27.TU.AmTr_v1.0_scaffold00024.5 0.8983064248196806 41 AMTR_s00039p00083280 Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate synthesis.methylthioalkylmalate isomerase.large subunit evm_27.TU.AmTr_v1.0_scaffold00039.46 0.8981880709580987 56 AMTR_s00010p00234800 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.mTERF splicing factor evm_27.TU.AmTr_v1.0_scaffold00010.279 0.8976470526853001 44 AMTR_s00071p00146130 DNA damage response.DNA repair mechanisms.mismatch repair (MMR).MLH1-PMS1 heterodimer.MLH1 component evm_27.TU.AmTr_v1.0_scaffold00071.132 0.8974353082173001 45 AMTR_s00030p00120950 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.69 0.897145581579473 57 AMTR_s00033p00140070 evm_27.TU.AmTr_v1.0_scaffold00033.76 0.8970446336075235 48 AMTR_s00040p00182290 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.HDA9 component evm_27.TU.AmTr_v1.0_scaffold00040.176 0.895150347052658 52 AMTR_s00136p00085920 Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00136.44 0.8943776180651941 93 AMTR_s00169p00051950 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B-type regulatory component evm_27.TU.AmTr_v1.0_scaffold00169.32 0.8939764053440741 79 AMTR_s00154p00022230 evm_27.TU.AmTr_v1.0_scaffold00154.6 0.8924972103827034 57 AMTR_s00026p00039130 evm_27.TU.AmTr_v1.0_scaffold00026.13 0.8912429500225582 60 AMTR_s00024p00219730 E3 ubiquitin ligase PARAQUAT TOLERANCE 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.212 0.8910640072574029 78 AMTR_s00018p00182200 evm_27.TU.AmTr_v1.0_scaffold00018.101 0.8904526128108338 84 AMTR_s00046p00223780 Protein degradation.peptidase families.metallopeptidase activities.M3 protease evm_27.TU.AmTr_v1.0_scaffold00046.160 0.8903031732106862 74 AMTR_s00002p00260810 DNA damage-binding protein 1 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.446 0.8893819163877034 66 AMTR_s00010p00247870 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.340 0.8866968631202075 72 AMTR_s00210p00017530 Pentatricopeptide repeat-containing protein At5g18390, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00210.3 0.8844049550425064 87 AMTR_s00110p00131760 Solute transport.primary active transport.P-type ATPase superfamily.P5 family.MIA P5-type cation-transporting ATPase evm_27.TU.AmTr_v1.0_scaffold00110.106 0.8841064715691881 80 AMTR_s00021p00235220 Probable inactive ATP-dependent zinc metalloprotease FTSHI 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.236 0.8831715248191533 82 AMTR_s00062p00213230 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana 0.8830162838987362 98 AMTR_s00022p00049680 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.accessory component evm_27.TU.AmTr_v1.0_scaffold00022.28 0.8828825228045113 84 AMTR_s00016p00242080 Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.257 0.8817201575920657 89 AMTR_s00114p00090820 Solute transport.carrier-mediated transport.BART superfamily.BASS family.BASS small solute transporter evm_27.TU.AmTr_v1.0_scaffold00114.35 0.8816357502228996 91 AMTR_s00034p00221180 RNA processing.RNA modification.pseudouridylation.RluA-type RNA pseudouridine synthase evm_27.TU.AmTr_v1.0_scaffold00034.92 0.881356103909622 92 AMTR_s00060p00101960 evm_27.TU.AmTr_v1.0_scaffold00060.46 0.8812058601783802 93 AMTR_s00002p00150300 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.118 0.8811484684089215 94 AMTR_s00068p00192690 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIe transcription factor complex.RPC82 component evm_27.TU.AmTr_v1.0_scaffold00068.156 0.8810528061519475 95