Sequence Description Alias PCC hrr AMTR_s00059p00072490 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component evm_27.TU.AmTr_v1.0_scaffold00059.47 0.9095622262934134 1 AMTR_s00079p00078710 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor evm_27.TU.AmTr_v1.0_scaffold00079.26 0.9077877563184766 26 AMTR_s00002p00270030 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00002.567 0.9016830100046144 10 AMTR_s00046p00153230 evm_27.TU.AmTr_v1.0_scaffold00046.81 0.8980734284334189 13 AMTR_s00029p00079800 RNA biosynthesis.transcriptional activation.HUA2 transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.74 0.8927032419040578 23 AMTR_s00004p00023800 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00004.8 0.8881108642979736 46 AMTR_s00019p00238830 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component evm_27.TU.AmTr_v1.0_scaffold00019.346 0.8858850086532907 7 AMTR_s00022p00154500 RNA biosynthesis.RNA polymerase I-dependent transcription.TFIa/RRN3 basal transcription factor evm_27.TU.AmTr_v1.0_scaffold00022.156 0.8823787310305569 35 AMTR_s00018p00042060 evm_27.TU.AmTr_v1.0_scaffold00018.11 0.8787907392746145 9 AMTR_s00007p00182220 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component evm_27.TU.AmTr_v1.0_scaffold00007.146 0.8782998816899703 19 AMTR_s00088p00170220 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00088.145 0.8770886783395218 30 AMTR_s00148p00018960 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP96 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00148.5 0.8764303729454065 13 AMTR_s00048p00066880 Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.27 0.8756173735269409 54 AMTR_s00031p00234160 Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein evm_27.TU.AmTr_v1.0_scaffold00031.112 0.8737064830727431 92 AMTR_s00166p00076690 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.PUF2 plant-specific RAB5 effector evm_27.TU.AmTr_v1.0_scaffold00166.44 0.8698884072740236 74 AMTR_s00090p00148990 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00090.83 0.8695291388145642 83 AMTR_s00104p00134460 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.MINIYO regulator protein evm_27.TU.AmTr_v1.0_scaffold00104.64 0.8692256399031879 92 AMTR_s00057p00206860 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00057.248 0.8671390190595505 63 AMTR_s00030p00026320 Vesicle trafficking.autophagosome formation.ATG1-13 autophagosome assembly control complex.ATG13 accessory component evm_27.TU.AmTr_v1.0_scaffold00030.6 0.8666149817022328 26 AMTR_s00012p00251030 Pumilio homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.251 0.8652072609300644 71 AMTR_s00053p00201040 DnaJ protein P58IPK homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00053.155 0.8640877864530735 29 AMTR_s00142p00104760 evm_27.TU.AmTr_v1.0_scaffold00142.69 0.8631443321608965 30 AMTR_s02191p00008430 evm_27.TU.AmTr_v1.0_scaffold02191.1 0.8629087603535419 31 AMTR_s00024p00218120 Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA1 component evm_27.TU.AmTr_v1.0_scaffold00024.209 0.8613574738124138 33 AMTR_s00051p00079490 RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00051.29 0.8596573106167449 55 AMTR_s00002p00140630 Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.eIF4G component evm_27.TU.AmTr_v1.0_scaffold00002.103 0.8595353222561497 100 AMTR_s00135p00021060 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00135.4 0.859459195411483 49 AMTR_s00021p00136760 Transcription factor GTE4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.92 0.8590009370186729 40 AMTR_s00156p00017490 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.VPS9 RAB5 guanine nucleotide exchange factor evm_27.TU.AmTr_v1.0_scaffold00156.4 0.8578525663315401 69 AMTR_s00041p00100290 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Prp17 component evm_27.TU.AmTr_v1.0_scaffold00041.67 0.8574251155744278 42 AMTR_s00146p00059560 Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class XI myosin evm_27.TU.AmTr_v1.0_scaffold00146.36 0.8571671695243873 48 AMTR_s00114p00117470 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.DCP1 regulatory component evm_27.TU.AmTr_v1.0_scaffold00114.51 0.8565178360435787 86 AMTR_s00056p00054070 Protein unc-13 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00056.34 0.8560095271050105 46 AMTR_s00009p00258510 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.CUL1/CUL2 scaffold component evm_27.TU.AmTr_v1.0_scaffold00009.301 0.8557728774079626 48 AMTR_s00009p00258110 DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00009.299 0.8545477792559122 98 AMTR_s00027p00200690 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.69 0.8543313566554689 51 AMTR_s00033p00211330 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase evm_27.TU.AmTr_v1.0_scaffold00033.185 0.8533562784619145 52 AMTR_s00154p00086540 Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00154.56 0.8525752481981708 62 AMTR_s00065p00122030 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.72 0.8509711535015231 56 AMTR_s00043p00170080 evm_27.TU.AmTr_v1.0_scaffold00043.39 0.849875710613892 59 AMTR_s00003p00017000 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP4 phosphatase complex.regulatory component (PSY2L) evm_27.TU.AmTr_v1.0_scaffold00003.5 0.8478930804156637 62 AMTR_s00087p00057840 evm_27.TU.AmTr_v1.0_scaffold00087.12 0.847374386463463 67 AMTR_s00074p00152100 evm_27.TU.AmTr_v1.0_scaffold00074.67 0.846764878349075 68 AMTR_s00058p00188470 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB1 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00058.186 0.8466852920349084 69 AMTR_s00055p00173600 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase evm_27.TU.AmTr_v1.0_scaffold00055.90 0.8466617230482882 70 AMTR_s00010p00259590 DExH-box ATP-dependent RNA helicase DExH18, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.424 0.8433377420337006 79 AMTR_s00029p00205680 DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00029.296 0.8432690421487739 80 AMTR_s00006p00248360 Phytohormones.auxin.transport.polar auxin transport.BIG regulator protein evm_27.TU.AmTr_v1.0_scaffold00006.138 0.8429685687476786 81 AMTR_s00004p00270220 evm_27.TU.AmTr_v1.0_scaffold00004.293 0.841691961782996 86 AMTR_s00078p00155240 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor evm_27.TU.AmTr_v1.0_scaffold00078.136 0.841595983658382 87 AMTR_s00024p00176520 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase evm_27.TU.AmTr_v1.0_scaffold00024.135 0.8412743670315143 89 AMTR_s00003p00111200 Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.77 0.8400523618928444 97 AMTR_s00057p00195320 evm_27.TU.AmTr_v1.0_scaffold00057.220 0.8399938466884337 93 AMTR_s00019p00220910 Pentatricopeptide repeat-containing protein At1g03100, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.279 0.8389153386230562 98