Sequence Description Alias PCC hrr AMTR_s00109p00129480 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor evm_27.TU.AmTr_v1.0_scaffold00109.135 0.9390435628176121 5 AMTR_s00044p00107090 Cytoskeleton.cp-actin-dependent plastid movement.PMI1/PMI15 cp-actin stability factor evm_27.TU.AmTr_v1.0_scaffold00044.78 0.9276465499500648 2 AMTR_s00106p00108310 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component evm_27.TU.AmTr_v1.0_scaffold00106.79 0.9258223501140135 12 AMTR_s00016p00164160 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein evm_27.TU.AmTr_v1.0_scaffold00016.120 0.9217210269954573 5 AMTR_s00003p00168720 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor evm_27.TU.AmTr_v1.0_scaffold00003.145 0.9203128374162326 30 AMTR_s00045p00209230 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component evm_27.TU.AmTr_v1.0_scaffold00045.285 0.90910489281439 6 AMTR_s00165p00028990 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00165.13 0.9088549404502204 7 AMTR_s00006p00263760 Disease resistance protein RPM1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.255 0.9083195581900305 8 AMTR_s00043p00203580 RNA processing.organelle machineries.RNA editing.MORF-type RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00043.64 0.9072577202905727 20 AMTR_s00110p00042430 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein evm_27.TU.AmTr_v1.0_scaffold00110.17 0.9044909033971562 14 AMTR_s00126p00013900 Protein modification.peptide maturation.mitochondrion.PreP organellar peptidasome evm_27.TU.AmTr_v1.0_scaffold00126.1 0.9043129883909654 16 AMTR_s00049p00227880 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor evm_27.TU.AmTr_v1.0_scaffold00049.275 0.902497159350143 18 AMTR_s00016p00251680 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00016.302 0.9020487983362099 45 AMTR_s00029p00221060 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL4 component evm_27.TU.AmTr_v1.0_scaffold00029.338 0.9017271894840668 43 AMTR_s00024p00153080 Protein modification.phosphorylation.TKL kinase superfamily.G-Lectin kinase families.SD-2 kinase evm_27.TU.AmTr_v1.0_scaffold00024.107 0.8999990544564004 15 AMTR_s00012p00154880 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component evm_27.TU.AmTr_v1.0_scaffold00012.92 0.8991827617462054 68 AMTR_s00001p00232760 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component evm_27.TU.AmTr_v1.0_scaffold00001.249 0.8985892156753518 32 AMTR_s00032p00120910 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00032.84 0.8983143955733679 18 AMTR_s00041p00199430 evm_27.TU.AmTr_v1.0_scaffold00041.178 0.8970252292766053 28 AMTR_s00008p00109510 Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera evm_27.TU.AmTr_v1.0_scaffold00008.45 0.8925958520279323 51 AMTR_s00044p00131190 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00044.119 0.8923512137858483 39 AMTR_s00049p00052690 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor evm_27.TU.AmTr_v1.0_scaffold00049.26 0.8892295224834619 41 AMTR_s00065p00176540 Cellular respiration.glycolysis.cytosolic glycolysis.glyceraldehyde 3-phosphate dehydrogenase activities.NADP-dependent glyceraldehyde 3-phosphate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00065.146 0.8885585418147316 27 AMTR_s00005p00239290 Coenzyme metabolism.thiamine pyrophosphate synthesis.thiazole synthesis.biosynthetic protein (Thi4) evm_27.TU.AmTr_v1.0_scaffold00005.125 0.8865369794562232 35 AMTR_s00010p00259290 External stimuli response.light.UV-A/blue light.phototropin-mediated photoperception.PKS phototropin signalling factor evm_27.TU.AmTr_v1.0_scaffold00010.421 0.8847012812591603 25 AMTR_s00017p00154940 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).PsbS-dependent machinery.PsbS protein evm_27.TU.AmTr_v1.0_scaffold00017.71 0.8842432790433348 30 AMTR_s00002p00266310 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.glutathione reductase (GR) evm_27.TU.AmTr_v1.0_scaffold00002.507 0.8837180956856787 71 AMTR_s00019p00182190 Solute transport.channels.GLR ligand-gated cation channel evm_27.TU.AmTr_v1.0_scaffold00019.192 0.8826551624599679 28 AMTR_s00071p00016000 Redox homeostasis.chloroplast redox homeostasis.M-type thioredoxin evm_27.TU.AmTr_v1.0_scaffold00071.5 0.880845350659228 73 AMTR_s00010p00259490 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.hydroxymethylpyrimidine phosphate synthase (ThiC) evm_27.TU.AmTr_v1.0_scaffold00010.423 0.8798601513554944 74 AMTR_s00025p00237880 evm_27.TU.AmTr_v1.0_scaffold00025.357 0.879369765145486 57 AMTR_s00126p00110160 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.PMH RNA helicase evm_27.TU.AmTr_v1.0_scaffold00126.53 0.8782561618746718 38 AMTR_s00029p00223030 Lipid metabolism.galactolipid and sulfolipid synthesis.UDP-sulfoquinovose:DAG sulfoquinovosyltransferase evm_27.TU.AmTr_v1.0_scaffold00029.342 0.8778523270702621 47 AMTR_s00011p00136520 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP8/TAC6 component evm_27.TU.AmTr_v1.0_scaffold00011.39 0.8775912415186357 35 AMTR_s00004p00178250 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00004.203 0.8760652984871125 100 AMTR_s00122p00139490 Root phototropism protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00122.75 0.8758626667689576 37 AMTR_s00103p00133560 Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL-type) evm_27.TU.AmTr_v1.0_scaffold00103.83 0.8740949879106097 38 AMTR_s00022p00205270 Phytohormones.jasmonic acid.synthesis.13-lipoxygenase evm_27.TU.AmTr_v1.0_scaffold00022.242 0.8736778555927172 47 AMTR_s00165p00029520 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00165.14 0.8736269727600063 40 AMTR_s00147p00070270 Cytoskeleton.cp-actin-dependent plastid movement.CHUP motility factor evm_27.TU.AmTr_v1.0_scaffold00147.32 0.8726417160015632 41 AMTR_s00021p00200120 evm_27.TU.AmTr_v1.0_scaffold00021.166 0.8718700265447604 83 AMTR_s00018p00243310 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.Mg-protoporphyrin IX O-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00018.150 0.8712468426359834 66 AMTR_s00039p00160690 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb28 protein evm_27.TU.AmTr_v1.0_scaffold00039.114 0.8699541357028109 68 AMTR_s00019p00088750 Protein TSS OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.66 0.8676738194637286 46 AMTR_s00135p00104240 Solute transport.carrier-mediated transport.DMT superfamily.PUP organic cation transporter evm_27.TU.AmTr_v1.0_scaffold00135.60 0.8623501134556552 54 AMTR_s00005p00203240 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component evm_27.TU.AmTr_v1.0_scaffold00005.80 0.861946294617062 52 AMTR_s00037p00168570 Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit gamma evm_27.TU.AmTr_v1.0_scaffold00037.79 0.860067287448218 59 AMTR_s00081p00123450 evm_27.TU.AmTr_v1.0_scaffold00081.42 0.8590799831485159 55 AMTR_s00037p00164200 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSIII-type starch synthase evm_27.TU.AmTr_v1.0_scaffold00037.78 0.8574958169600374 56 AMTR_s00076p00039590 Phytohormones.abscisic acid.synthesis.ABA1 zeaxanthin epoxidase evm_27.TU.AmTr_v1.0_scaffold00076.7 0.8562468254476168 91 AMTR_s00092p00096920 Protein biosynthesis.organelle translation machineries.translation initiation.IF-2 initiation factor evm_27.TU.AmTr_v1.0_scaffold00092.54 0.8560430020632154 71 AMTR_s00003p00079190 External stimuli response.temperature.temperature sensors.PHY-B temperature sensor protein evm_27.TU.AmTr_v1.0_scaffold00003.45 0.8558445418467668 59 AMTR_s00145p00064330 Enzyme classification.EC_3 hydrolases.EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond evm_27.TU.AmTr_v1.0_scaffold00145.20 0.8549364344426674 60 AMTR_s00009p00163120 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo assembly.RAF1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00009.90 0.8533998743830936 61 AMTR_s00103p00133280 Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL-type) evm_27.TU.AmTr_v1.0_scaffold00103.82 0.852262974150295 63 AMTR_s00064p00107710 RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor evm_27.TU.AmTr_v1.0_scaffold00064.40 0.8519822689911345 79 AMTR_s00047p00149040 Probable acyl-activating enzyme 1, peroxisomal OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00047.69 0.8512345991525812 65 AMTR_s00010p00262670 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.geranylgeranyl reductase ChlP evm_27.TU.AmTr_v1.0_scaffold00010.474 0.8502047229315404 66 AMTR_s00144p00086790 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00144.46 0.8498790819396097 67 AMTR_s00032p00218900 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen evm_27.TU.AmTr_v1.0_scaffold00032.219 0.8497011864486496 68 AMTR_s00066p00179760 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00066.221 0.849615813977838 69 AMTR_s00017p00136990 Cellular respiration.glycolysis.plastidial glycolysis.fructose-1,6-bisphosphate aldolase evm_27.TU.AmTr_v1.0_scaffold00017.60 0.8490110484607347 87 AMTR_s00002p00270990 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.chlorophyllase (CLH) evm_27.TU.AmTr_v1.0_scaffold00002.603 0.8486392859991729 72 AMTR_s00022p00242310 Protein modification.peptide maturation.plastid.CtpA carboxy-terminal processing peptidase evm_27.TU.AmTr_v1.0_scaffold00022.351 0.8485909447868725 100 AMTR_s00011p00245550 Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.144 0.8483227728829658 92 AMTR_s00092p00098850 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00092.56 0.8481225833541498 86 AMTR_s00036p00109340 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL12 component evm_27.TU.AmTr_v1.0_scaffold00036.44 0.8475681199609766 97 AMTR_s00067p00206610 evm_27.TU.AmTr_v1.0_scaffold00067.230 0.8472174108594733 78 AMTR_s00135p00058090 Protein CURVATURE THYLAKOID 1D, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00135.24 0.8469960207850252 94 AMTR_s00019p00118960 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic55 component evm_27.TU.AmTr_v1.0_scaffold00019.95 0.8467979642089429 80 AMTR_s00040p00098330 Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.61 0.8465581465000526 81 AMTR_s00063p00211490 evm_27.TU.AmTr_v1.0_scaffold00063.90 0.8465169494418313 82 AMTR_s00030p00246840 Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate degradation.nitrilase evm_27.TU.AmTr_v1.0_scaffold00030.227 0.8455128540629845 83 AMTR_s00046p00093500 Photosynthesis.photophosphorylation.ATP synthase complex.membrane CF0 subcomplex.subunit b_ evm_27.TU.AmTr_v1.0_scaffold00046.51 0.8452815432952374 85 AMTR_s00007p00061550 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00007.32 0.8446599504673262 93 AMTR_s00051p00142580 Uncharacterized protein At4g06744 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00051.54 0.8432754481920502 87 AMTR_s00007p00251190 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR6 evm_27.TU.AmTr_v1.0_scaffold00007.284 0.8427140479400542 89 AMTR_s00451p00003410 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00451.1 0.8404995064762598 95 AMTR_s00032p00227150 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00032.244 0.8397045435157802 97 AMTR_s00110p00125440 Putative pentatricopeptide repeat-containing protein At1g26500 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.100 0.8386640973057403 98 AMTR_s00164p00068000 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component evm_27.TU.AmTr_v1.0_scaffold00164.30 0.8383764924516217 99