Sequence Description Alias PCC hrr AMTR_s00045p00028830 Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.6 0.95123068279356 1 AMTR_s00169p00047130 evm_27.TU.AmTr_v1.0_scaffold00169.29 0.9508193426976512 2 AMTR_s00122p00094620 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00122.38 0.9489614749312546 3 AMTR_s00036p00235910 evm_27.TU.AmTr_v1.0_scaffold00036.181 0.9434402954260381 4 AMTR_s00029p00190880 evm_27.TU.AmTr_v1.0_scaffold00029.258 0.929660968247675 5 AMTR_s00060p00130340 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00060.71 0.9228336809925726 15 AMTR_s00099p00056810 evm_27.TU.AmTr_v1.0_scaffold00099.39 0.9217796285896432 7 AMTR_s00009p00267190 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.large subunit evm_27.TU.AmTr_v1.0_scaffold00009.402 0.919496147319005 8 AMTR_s00017p00130610 DDB1- and CUL4-associated factor homolog 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00017.53 0.9190096794480783 9 AMTR_s00010p00267800 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.543 0.9177377377973212 10 AMTR_s00066p00161070 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).snRNP40/U5-40kDa snRNP component evm_27.TU.AmTr_v1.0_scaffold00066.171 0.9175892913493768 11 AMTR_s00001p00272900 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.9169461569213692 13 AMTR_s00092p00098010 evm_27.TU.AmTr_v1.0_scaffold00092.55 0.9165795524712037 15 AMTR_s00066p00089100 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.69 0.9153698400967302 59 AMTR_s00153p00073330 Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00153.37 0.9136568885258526 15 AMTR_s00147p00036340 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00147.15 0.9131347852832609 50 AMTR_s00176p00054790 Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00176.28 0.912836097125666 57 AMTR_s00099p00155770 Pentatricopeptide repeat-containing protein At1g14470 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.150 0.9121637059112706 18 AMTR_s00039p00032460 External stimuli response.light.red/far red light.PIF transcriptional regulator evm_27.TU.AmTr_v1.0_scaffold00039.9 0.9118217683688841 19 AMTR_s00052p00100800 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.DXS 1-deoxy-D-xylulose 5-phosphate synthase evm_27.TU.AmTr_v1.0_scaffold00052.29 0.90866124289381 20 AMTR_s00019p00154210 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ21/22 splicing factor evm_27.TU.AmTr_v1.0_scaffold00019.143 0.9062574314287938 21 AMTR_s00066p00190730 RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor evm_27.TU.AmTr_v1.0_scaffold00066.242 0.9041034307484231 23 AMTR_s00002p00175460 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.148 0.9025761845507099 24 AMTR_s00047p00204500 evm_27.TU.AmTr_v1.0_scaffold00047.137 0.9024912428916738 25 AMTR_s00001p00152770 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 1 evm_27.TU.AmTr_v1.0_scaffold00001.137 0.9007664947019618 26 AMTR_s00060p00030440 evm_27.TU.AmTr_v1.0_scaffold00060.6 0.8998118730643678 27 AMTR_s00119p00021560 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00119.5 0.8993919149071877 35 AMTR_s00110p00088680 evm_27.TU.AmTr_v1.0_scaffold00110.51 0.8993847778182167 30 AMTR_s00029p00107550 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF15 component evm_27.TU.AmTr_v1.0_scaffold00029.110 0.898663836788576 32 AMTR_s00099p00155940 RNA biosynthesis.transcriptional activation.Alfin-like transcription factor evm_27.TU.AmTr_v1.0_scaffold00099.152 0.8978590994453528 34 AMTR_s00011p00072820 evm_27.TU.AmTr_v1.0_scaffold00011.14 0.8978331247290333 35 AMTR_s00088p00115810 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate synthetase evm_27.TU.AmTr_v1.0_scaffold00088.82 0.896616445533214 94 AMTR_s00024p00180690 Splicing factor-like protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.141 0.8964612982464268 38 AMTR_s00021p00248250 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component evm_27.TU.AmTr_v1.0_scaffold00021.274 0.8962231694317639 39 AMTR_s00111p00143660 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.124 0.8931120236813246 40 AMTR_s00016p00233120 Cell wall.sporopollenin.exine wall formation.NEF1 exine patterning factor evm_27.TU.AmTr_v1.0_scaffold00016.232 0.8920843419190645 41 AMTR_s00001p00273090 Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.593 0.8901945155356594 42 AMTR_s00064p00192980 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.beta subunit evm_27.TU.AmTr_v1.0_scaffold00064.89 0.8897692201395007 43 AMTR_s00013p00152000 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00013.78 0.8897452098121973 88 AMTR_s00059p00146300 Protein degradation.peptidase families.metallopeptidase activities.Leishmanolysin-type protease evm_27.TU.AmTr_v1.0_scaffold00059.129 0.8891393584916314 45 AMTR_s00038p00121420 Phytohormones.abscisic acid.perception and signalling.signal transducer (KEG) evm_27.TU.AmTr_v1.0_scaffold00038.67 0.8878993989694168 48 AMTR_s00063p00034480 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Pfs2/FY component evm_27.TU.AmTr_v1.0_scaffold00063.6 0.8877192052176013 49 AMTR_s00142p00058560 Probable ADP-ribosylation factor GTPase-activating protein AGD14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00142.32 0.8875645930337728 50 AMTR_s00077p00187600 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-VII kinase families.RLCK-VIIa kinase evm_27.TU.AmTr_v1.0_scaffold00077.219 0.8868613827838575 51 AMTR_s00012p00236230 evm_27.TU.AmTr_v1.0_scaffold00012.198 0.8867587278560105 52 AMTR_s00001p00246890 evm_27.TU.AmTr_v1.0_scaffold00001.300 0.8854013897669725 54 AMTR_s00053p00219090 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO chain-forming-ligase E4 enzyme (PIAL) evm_27.TU.AmTr_v1.0_scaffold00053.172 0.8850400934941283 55 AMTR_s00027p00222730 evm_27.TU.AmTr_v1.0_scaffold00027.93 0.8844862766838065 56 AMTR_s00048p00020720 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC10 component evm_27.TU.AmTr_v1.0_scaffold00048.3 0.8830746460687516 58 AMTR_s00106p00090850 evm_27.TU.AmTr_v1.0_scaffold00106.59 0.8829856417199563 59 AMTR_s00061p00095620 RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor evm_27.TU.AmTr_v1.0_scaffold00061.72 0.8827795333490179 60 AMTR_s00025p00204100 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00025.262 0.8826687721173438 61 AMTR_s00025p00184490 evm_27.TU.AmTr_v1.0_scaffold00025.223 0.8818076827767752 63 AMTR_s00064p00195070 Chaperonin CPN60-1, mitochondrial OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00064.92 0.8799468067980942 65 AMTR_s00024p00189370 APO protein 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.154 0.8788843204605066 67 AMTR_s00032p00149770 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00032.116 0.8786450648772124 69 AMTR_s00049p00181100 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00049.175 0.8779279777440796 70 AMTR_s00006p00265300 RNA biosynthesis.transcriptional activation.Trihelix transcription factor evm_27.TU.AmTr_v1.0_scaffold00006.275 0.877356308600255 72 AMTR_s00076p00195870 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter evm_27.TU.AmTr_v1.0_scaffold00076.86 0.8772307838774742 73 AMTR_s00120p00067860 Protein modification.S-nitrosylation and denitrosylation.GSNOR S-nitrosoglutathione reductase evm_27.TU.AmTr_v1.0_scaffold00120.32 0.8768758640010024 74 AMTR_s00018p00254940 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00018.167 0.8763207296052568 75 AMTR_s00028p00239280 Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00028.127 0.875733532822338 90 AMTR_s00003p00270020 External stimuli response.temperature.temperature sensors.CNGC2 temperature sensor protein evm_27.TU.AmTr_v1.0_scaffold00003.425 0.8755845298469739 81 AMTR_s00058p00069070 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor evm_27.TU.AmTr_v1.0_scaffold00058.31 0.8755700538778991 82 AMTR_s00066p00043610 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.2-isopropylmalate synthase evm_27.TU.AmTr_v1.0_scaffold00066.21 0.8754856006171995 83 AMTR_s00002p00263460 Flowering locus K homology domain OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.479 0.8747921374084867 84 AMTR_s00078p00187540 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.193 0.8747398668784956 85 AMTR_s00108p00139240 Ras-related protein RABA1f OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00108.41 0.8729492485492433 90 AMTR_s00071p00151200 evm_27.TU.AmTr_v1.0_scaffold00071.137 0.8710383973459075 97 AMTR_s00062p00211520 RNA biosynthesis.transcriptional activation.SBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00062.234 0.8705872216556729 98