Sequence Description Alias PCC hrr AMTR_s00012p00251030 Pumilio homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.251 0.9431832460267028 1 AMTR_s00062p00113470 DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00062.93 0.9292722505287809 10 AMTR_s00066p00174610 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component evm_27.TU.AmTr_v1.0_scaffold00066.206 0.923681336641353 10 AMTR_s00080p00131040 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00080.56 0.9228512189930446 6 AMTR_s00068p00181410 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00068.139 0.9213290456407853 33 AMTR_s00068p00177220 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDK9 kinase evm_27.TU.AmTr_v1.0_scaffold00068.133 0.9201157278953631 19 AMTR_s00024p00121650 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase evm_27.TU.AmTr_v1.0_scaffold00024.71 0.9172757545598338 43 AMTR_s00090p00148990 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00090.83 0.9167060624710976 8 AMTR_s00045p00076020 RNA biosynthesis.transcriptional activation.SBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00045.66 0.9139744765954595 68 AMTR_s00071p00188270 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF3 component evm_27.TU.AmTr_v1.0_scaffold00071.198 0.9118632914113749 10 AMTR_s00053p00015490 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type) evm_27.TU.AmTr_v1.0_scaffold00053.2 0.9070042315656456 11 AMTR_s00071p00110320 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00071.85 0.9069535627497554 12 AMTR_s00088p00077590 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00088.47 0.9056129959708316 15 AMTR_s00033p00216190 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.DRP3 dynamin-like protein evm_27.TU.AmTr_v1.0_scaffold00033.191 0.9052603342541262 18 AMTR_s00020p00134590 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IPO8 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00020.48 0.9046812369501385 16 AMTR_s00209p00023450 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00209.4 0.9025881132180867 50 AMTR_s00682p00010920 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SPT16 component evm_27.TU.AmTr_v1.0_scaffold00682.1 0.9016262139234914 40 AMTR_s00087p00057840 evm_27.TU.AmTr_v1.0_scaffold00087.12 0.9012865460899016 19 AMTR_s00027p00205150 Protein modification.phosphorylation.STE kinase superfamily.MAP4K kinase evm_27.TU.AmTr_v1.0_scaffold00027.73 0.9001284595322784 33 AMTR_s00006p00242820 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component evm_27.TU.AmTr_v1.0_scaffold00006.121 0.8994942513761981 100 AMTR_s00007p00182220 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component evm_27.TU.AmTr_v1.0_scaffold00007.146 0.8988683026226972 22 AMTR_s00078p00055040 RNA biosynthesis.siRNA biogenesis.RDR6 ssRNA polymerase evm_27.TU.AmTr_v1.0_scaffold00078.28 0.8987531419934187 29 AMTR_s00036p00205320 Protein degradation.peptidase families.metallopeptidase activities.M16 families.PQQL-like peptidase evm_27.TU.AmTr_v1.0_scaffold00036.122 0.8980317315636104 66 AMTR_s00021p00207790 evm_27.TU.AmTr_v1.0_scaffold00021.180 0.8975804025261185 35 AMTR_s00055p00173600 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase evm_27.TU.AmTr_v1.0_scaffold00055.90 0.8974499163815983 27 AMTR_s00062p00149800 evm_27.TU.AmTr_v1.0_scaffold00062.138 0.8973425260422809 41 AMTR_s00059p00072490 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component evm_27.TU.AmTr_v1.0_scaffold00059.47 0.8966750959737003 29 AMTR_s00046p00153230 evm_27.TU.AmTr_v1.0_scaffold00046.81 0.8965908491801691 30 AMTR_s00019p00148170 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein evm_27.TU.AmTr_v1.0_scaffold00019.136 0.8958615198174616 92 AMTR_s00088p00153240 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP133 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00088.123 0.8953985090572067 47 AMTR_s00001p00229100 RNA processing.RNA 3-end polyadenylation.Cleavage Stimulatory Factor (CstF) complex.CstF64/Rna15 component evm_27.TU.AmTr_v1.0_scaffold00001.240 0.8939505592869722 76 AMTR_s00041p00031550 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor evm_27.TU.AmTr_v1.0_scaffold00041.15 0.8935260936302369 36 AMTR_s00064p00173090 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SR140 snRNP-associated protein evm_27.TU.AmTr_v1.0_scaffold00064.75 0.8934637378785963 37 AMTR_s00056p00054070 Protein unc-13 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00056.34 0.8931991749883826 38 AMTR_s00093p00085820 Protein MEI2-like 2 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00093.23 0.8929436596687298 39 AMTR_s00078p00190750 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.Hsp110 protein evm_27.TU.AmTr_v1.0_scaffold00078.198 0.8887829275646805 43 AMTR_s00045p00233670 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.PRL1/MAC2 component evm_27.TU.AmTr_v1.0_scaffold00045.345 0.8885816677860195 45 AMTR_s00149p00102010 evm_27.TU.AmTr_v1.0_scaffold00149.85 0.8881108642979736 46 AMTR_s00072p00117380 Cell division control protein 48 homolog D OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.59 0.8878171331208434 47 AMTR_s00022p00114710 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Brr2 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00022.105 0.8862082041449377 51 AMTR_s00135p00021060 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00135.4 0.8853656885443589 50 AMTR_s00010p00207960 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.201 0.8849445798947051 99 AMTR_s00041p00134980 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.MTA component evm_27.TU.AmTr_v1.0_scaffold00041.95 0.8842036846259126 53 AMTR_s00002p00140630 Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.eIF4G component evm_27.TU.AmTr_v1.0_scaffold00002.103 0.8841362687487312 54 AMTR_s00032p00053220 Phytohormones.ethylene.perception and signal transduction.ETR/ERS-type receptor protein evm_27.TU.AmTr_v1.0_scaffold00032.33 0.8836054178873151 56 AMTR_s00051p00079490 RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00051.29 0.8827042091692326 59 AMTR_s00012p00097440 evm_27.TU.AmTr_v1.0_scaffold00012.51 0.8822318517259684 60 AMTR_s00024p00115620 Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.65 0.8822315451361573 65 AMTR_s00037p00128200 evm_27.TU.AmTr_v1.0_scaffold00037.54 0.8809555275069257 71 AMTR_s00009p00238900 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component evm_27.TU.AmTr_v1.0_scaffold00009.205 0.880854275150893 64 AMTR_s00065p00122030 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.72 0.8807320689834452 66 AMTR_s00025p00181800 Pumilio homolog 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.219 0.8805408799540665 67 AMTR_s00137p00010410 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade I phosphatase evm_27.TU.AmTr_v1.0_scaffold00137.1 0.8804244638849635 100 AMTR_s00303p00010520 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00303.1 0.8801431300027692 70 AMTR_s00069p00127620 evm_27.TU.AmTr_v1.0_scaffold00069.88 0.8787378468498975 72 AMTR_s00045p00084300 evm_27.TU.AmTr_v1.0_scaffold00045.75 0.8774275208365163 100 AMTR_s00095p00126700 evm_27.TU.AmTr_v1.0_scaffold00095.83 0.877338342159391 76 AMTR_s00077p00082680 RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-VAL transcription factor evm_27.TU.AmTr_v1.0_scaffold00077.66 0.8772997421983404 77 AMTR_s00063p00175250 evm_27.TU.AmTr_v1.0_scaffold00063.55 0.8766876584654366 78 AMTR_s00106p00091710 evm_27.TU.AmTr_v1.0_scaffold00106.60 0.876388339732103 79 AMTR_s00106p00013240 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.SWA2/NOC1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00106.3 0.8763830905551228 82 AMTR_s00079p00078710 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor evm_27.TU.AmTr_v1.0_scaffold00079.26 0.8757829493573082 94 AMTR_s00085p00052820 Cell division cycle protein 48 homolog OS=Glycine max evm_27.TU.AmTr_v1.0_scaffold00085.22 0.8745602791358353 87 AMTR_s00021p00136760 Transcription factor GTE4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.92 0.874416403041577 88 AMTR_s00003p00175410 Phosphoinositide phosphatase SAC1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.151 0.8741763183949076 91 AMTR_s00049p00063500 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B1-type regulatory component evm_27.TU.AmTr_v1.0_scaffold00049.40 0.8737205902503546 92 AMTR_s00031p00234160 Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein evm_27.TU.AmTr_v1.0_scaffold00031.112 0.873629998090448 93 AMTR_s00007p00168430 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion.heavy chain 0.8733729131925871 94 AMTR_s00016p00110380 evm_27.TU.AmTr_v1.0_scaffold00016.72 0.8723441461086918 95 AMTR_s00002p00269760 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00002.558 0.8722939888113816 96 AMTR_s00092p00116010 KH domain-containing protein At4g18375 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.77 0.8720429101043294 98