Sequence Description Alias PCC hrr AMTR_s00087p00135370 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3h component evm_27.TU.AmTr_v1.0_scaffold00087.43 0.9310663799479788 1 AMTR_s00003p00049560 FIP1[V]-like protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.30 0.9262931795478935 2 AMTR_s00057p00038540 Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00057.18 0.9245903415123058 3 AMTR_s00017p00225350 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class II/ASH1 histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00017.175 0.921440245534774 8 AMTR_s00039p00202100 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS5 component evm_27.TU.AmTr_v1.0_scaffold00039.167 0.9200417336610109 5 AMTR_s00091p00096420 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC2-type golgin evm_27.TU.AmTr_v1.0_scaffold00091.36 0.9141373165200374 6 AMTR_s00039p00046970 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.SUVH2/9 methyl-DNA-binding factor evm_27.TU.AmTr_v1.0_scaffold00039.17 0.9103972183246124 7 AMTR_s00077p00102160 Rhodanese-like domain-containing protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.85 0.9032975681810717 8 AMTR_s00022p00202910 CDK5RAP3-like protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.238 0.9020846504805239 12 AMTR_s00095p00027730 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.8 0.8993443396982653 10 AMTR_s00008p00095900 evm_27.TU.AmTr_v1.0_scaffold00008.34 0.8990089607365042 11 AMTR_s00022p00221050 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO2 export karyopherin evm_27.TU.AmTr_v1.0_scaffold00022.277 0.8973858916136006 12 AMTR_s00002p00135040 Aspartate--tRNA ligase 2, cytoplasmic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.97 0.895441154726814 63 AMTR_s00002p00226510 evm_27.TU.AmTr_v1.0_scaffold00002.251 0.8946137612530771 14 AMTR_s00072p00173000 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.ENP1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00072.122 0.892664177633238 15 AMTR_s00039p00206760 RNA processing.ribonuclease activities.RNase P ribonuclease activities.RNA-dependent RNase P complex.RPP30/POP2 component evm_27.TU.AmTr_v1.0_scaffold00039.174 0.8922698973340751 16 AMTR_s00095p00026520 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.7 0.8911109329602483 17 AMTR_s00057p00168150 Uncharacterized protein At2g33490 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.175 0.8902402679237887 41 AMTR_s00067p00125830 evm_27.TU.AmTr_v1.0_scaffold00067.106 0.8889832190334197 19 AMTR_s00058p00176500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT3 gamma subunit evm_27.TU.AmTr_v1.0_scaffold00058.166 0.886705451234818 86 AMTR_s00058p00127050 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00058.91 0.8863668185650737 61 AMTR_s00039p00011800 Protein PIR OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.1 0.8846094917479638 22 AMTR_s00011p00266610 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF73/Ysh1 component evm_27.TU.AmTr_v1.0_scaffold00011.232 0.8841824330447663 48 AMTR_s00009p00256060 evm_27.TU.AmTr_v1.0_scaffold00009.284 0.8825930362394834 44 AMTR_s00061p00211510 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.OLI2 maturation factor evm_27.TU.AmTr_v1.0_scaffold00061.262 0.8818154164632297 26 AMTR_s00010p00225250 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.249 0.88084386791351 27 AMTR_s00010p00225430 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.250 0.88084386791351 28 AMTR_s00146p00068870 UBP1-associated proteins 1C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00146.41 0.8803257638525008 38 AMTR_s00018p00217640 RNA processing.RNA 5-end cap adding.mRNA capping enzyme evm_27.TU.AmTr_v1.0_scaffold00018.140 0.8795636242517585 37 AMTR_s00057p00214920 evm_27.TU.AmTr_v1.0_scaffold00057.271 0.8795482410592015 31 AMTR_s00064p00153650 evm_27.TU.AmTr_v1.0_scaffold00064.63 0.8792304207455605 32 AMTR_s00021p00042680 Protein modification.N-linked glycosylation.dolichol-phosphate-linked oligosaccharide precursor assembly.ALG9 alpha-1,2-mannosyltransferase evm_27.TU.AmTr_v1.0_scaffold00021.16 0.875282554748128 48 AMTR_s00002p00267210 evm_27.TU.AmTr_v1.0_scaffold00002.521 0.8741435801546722 52 AMTR_s00029p00078080 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.STT3 component evm_27.TU.AmTr_v1.0_scaffold00029.71 0.8737997513823742 37 AMTR_s00099p00021350 evm_27.TU.AmTr_v1.0_scaffold00099.7 0.8726140693539831 39 AMTR_s00057p00169950 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.arc lamp subcomplex.APC7 component evm_27.TU.AmTr_v1.0_scaffold00057.177 0.8712337422161045 41 AMTR_s00114p00123360 evm_27.TU.AmTr_v1.0_scaffold00114.56 0.8711556878110718 95 AMTR_s00021p00243200 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component evm_27.TU.AmTr_v1.0_scaffold00021.258 0.8708393584708128 43 AMTR_s00022p00062370 evm_27.TU.AmTr_v1.0_scaffold00022.41 0.8704058351945142 44 AMTR_s00045p00178420 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS51/UNH component evm_27.TU.AmTr_v1.0_scaffold00045.216 0.8686210000905519 48 AMTR_s00036p00184370 evm_27.TU.AmTr_v1.0_scaffold00036.95 0.8683775926687368 49 AMTR_s00119p00130720 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-4 component evm_27.TU.AmTr_v1.0_scaffold00119.104 0.8681418071281122 50 AMTR_s00119p00121460 Methyl-CpG-binding domain protein 4-like protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00119.95 0.867865357297665 51 AMTR_s00129p00037970 RNA biosynthesis.rRNA biogenesis.APUM23 factor evm_27.TU.AmTr_v1.0_scaffold00129.17 0.867579779632228 52 AMTR_s00066p00195180 evm_27.TU.AmTr_v1.0_scaffold00066.253 0.8673838196271414 53 AMTR_s00131p00065190 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00131.38 0.8669922129611907 55 AMTR_s00109p00125300 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-alpha component evm_27.TU.AmTr_v1.0_scaffold00109.126 0.866895254420982 56 AMTR_s00007p00078630 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS18 component evm_27.TU.AmTr_v1.0_scaffold00007.43 0.8654402500672806 65 AMTR_s00041p00194980 DNA damage response.BRCC DNA-damage response complex.BRCC45 component evm_27.TU.AmTr_v1.0_scaffold00041.172 0.8646356738128543 61 AMTR_s00068p00200420 evm_27.TU.AmTr_v1.0_scaffold00068.171 0.8645183594560545 85 AMTR_s00012p00230440 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.IDN/IDP regulatory protein evm_27.TU.AmTr_v1.0_scaffold00012.185 0.8641848448585326 64 AMTR_s00021p00164610 Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation exchanger (NCL/EF-CAX-type) evm_27.TU.AmTr_v1.0_scaffold00021.119 0.863922617690778 96 AMTR_s00003p00139120 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS2 rRNA removal.APUM24 rRNA processing factor evm_27.TU.AmTr_v1.0_scaffold00003.108 0.8636119531616817 67 AMTR_s00113p00129940 Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00113.28 0.8634248461167872 68 AMTR_s00029p00164640 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.212 0.8628330238343518 70 AMTR_s00010p00218390 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.PLP3 CCT-interacting tubulin folding cofactor evm_27.TU.AmTr_v1.0_scaffold00010.228 0.8627714704349004 74 AMTR_s00058p00026290 Solute transport.carrier-mediated transport.MC-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00058.6 0.8624108756119516 73 AMTR_s00007p00199090 evm_27.TU.AmTr_v1.0_scaffold00007.172 0.8623302894888076 82 AMTR_s00010p00236280 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00010.284 0.8622819967971153 75 AMTR_s00153p00030600 evm_27.TU.AmTr_v1.0_scaffold00153.10 0.8615677356217101 76 AMTR_s00095p00023580 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.6 0.8615167013084704 77 AMTR_s00023p00236700 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED4 component evm_27.TU.AmTr_v1.0_scaffold00023.196 0.8610669393213326 78 AMTR_s00078p00107740 Chromatin organisation.histone chaperone activities.FACT histone chaperone complex.SSRP component evm_27.TU.AmTr_v1.0_scaffold00078.79 0.8608238846323033 80 AMTR_s00045p00182070 DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.224 0.86065021574724 81 AMTR_s00040p00194390 Protein trichome birefringence-like 12 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.192 0.8603210989691769 83 AMTR_s00018p00166060 Cell wall.lignin.monolignol synthesis.caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) evm_27.TU.AmTr_v1.0_scaffold00018.91 0.8602731490727155 88 AMTR_s00125p00070010 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00125.16 0.8600954215133999 91 AMTR_s00155p00078230 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Rrp9/YAO1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00155.51 0.8596197778077653 87 AMTR_s00871p00002780 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00871.1 0.8589747715503112 91 AMTR_s00009p00185150 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) evm_27.TU.AmTr_v1.0_scaffold00009.115 0.8587061969960368 94 AMTR_s00004p00077740 evm_27.TU.AmTr_v1.0_scaffold00004.60 0.8583431592650361 96 AMTR_s00049p00147690 evm_27.TU.AmTr_v1.0_scaffold00049.128 0.8577715983881851 98 AMTR_s00126p00067580 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00126.26 0.8577584489440031 99