Sequence Description Alias PCC hrr AMTR_s00066p00089100 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.69 0.93944993204353 9 AMTR_s00122p00094620 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00122.38 0.937593302495125 13 AMTR_s00176p00054790 Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00176.28 0.9323984177640336 17 AMTR_s00029p00248140 Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana 0.931964064320183 4 AMTR_s00016p00255950 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00016.338 0.9311869378394091 5 AMTR_s00060p00130340 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00060.71 0.9303918570160749 6 AMTR_s00025p00184490 evm_27.TU.AmTr_v1.0_scaffold00025.223 0.9298186645912994 7 AMTR_s00104p00054580 Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD1 protein evm_27.TU.AmTr_v1.0_scaffold00104.16 0.9259341994361294 50 AMTR_s00092p00157140 evm_27.TU.AmTr_v1.0_scaffold00092.133 0.9212140493340574 86 AMTR_s00147p00036340 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00147.15 0.9199302336532903 27 AMTR_s00148p00040560 evm_27.TU.AmTr_v1.0_scaffold00148.20 0.9197951807701609 43 AMTR_s00002p00145340 Cellular respiration.tricarboxylic acid cycle.mitochondrial NAD-dependent malic enzyme evm_27.TU.AmTr_v1.0_scaffold00002.109 0.9194679659947459 31 AMTR_s00040p00229490 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.myotubularin lipid phosphatase evm_27.TU.AmTr_v1.0_scaffold00040.275 0.9194660647159341 13 AMTR_s00046p00089870 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component evm_27.TU.AmTr_v1.0_scaffold00046.46 0.9188255407264092 42 AMTR_s00046p00168380 Flowering time control protein FCA OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00046.92 0.9165795524712037 15 AMTR_s00047p00125370 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease evm_27.TU.AmTr_v1.0_scaffold00047.50 0.9155308406279801 50 AMTR_s00025p00038580 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.XPD-type subunit evm_27.TU.AmTr_v1.0_scaffold00025.17 0.9147094555857356 28 AMTR_s00063p00197920 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.78 0.9128684711691406 18 AMTR_s00061p00131900 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.VCS scaffold component evm_27.TU.AmTr_v1.0_scaffold00061.110 0.9119746582287942 40 AMTR_s00087p00144100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00087.47 0.9113639735978107 89 AMTR_s00003p00122400 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctionial hydroxyacyl-CoA dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00003.89 0.9112752539041136 96 AMTR_s00013p00152000 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00013.78 0.9108460648380975 38 AMTR_s00138p00044110 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component evm_27.TU.AmTr_v1.0_scaffold00138.19 0.9106435645669083 96 AMTR_s00099p00056810 evm_27.TU.AmTr_v1.0_scaffold00099.39 0.9106422067749527 25 AMTR_s00022p00114710 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Brr2 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00022.105 0.9100349838346984 26 AMTR_s00068p00181410 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00068.139 0.9093700251379528 70 AMTR_s00029p00211500 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter evm_27.TU.AmTr_v1.0_scaffold00029.308 0.9083007240177315 29 AMTR_s00071p00142490 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).UPF1 effector protein evm_27.TU.AmTr_v1.0_scaffold00071.128 0.9079269141165073 30 AMTR_s00186p00032060 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00186.12 0.9078623123616597 76 AMTR_s00028p00193460 Phytohormones.cytokinin.perception and signal transduction.AHK-type receptor evm_27.TU.AmTr_v1.0_scaffold00028.85 0.9075666791663778 74 AMTR_s00060p00033670 Multi-process regulation.TOR signalling pathway.TORC complex.TOR kinase component evm_27.TU.AmTr_v1.0_scaffold00060.9 0.9070216250249551 50 AMTR_s00104p00136740 DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.66 0.9062160268382299 34 AMTR_s00173p00035440 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.PININ component evm_27.TU.AmTr_v1.0_scaffold00173.5 0.9054324581712566 35 AMTR_s00088p00115810 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate synthetase evm_27.TU.AmTr_v1.0_scaffold00088.82 0.9050124017279729 63 AMTR_s00015p00161490 Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00015.32 0.9048161695186087 91 AMTR_s00036p00235910 evm_27.TU.AmTr_v1.0_scaffold00036.181 0.9032056621105523 39 AMTR_s00002p00175460 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.148 0.902630073240336 40 AMTR_s00077p00181380 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED5/MED24/MED33 component evm_27.TU.AmTr_v1.0_scaffold00077.205 0.9021375711916907 41 AMTR_s00076p00078090 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00076.20 0.9020197826106546 54 AMTR_s00059p00105450 evm_27.TU.AmTr_v1.0_scaffold00059.80 0.9014293653819702 43 AMTR_s00065p00174980 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00065.145 0.9012266849076727 89 AMTR_s00040p00210200 RNA processing.RNA 3-end polyadenylation.Cleavage Factor II (CF-IIm) complex.Pcf11 component evm_27.TU.AmTr_v1.0_scaffold00040.222 0.900568438064222 82 AMTR_s00055p00198590 Protein modification.phosphorylation.STE kinase superfamily.MAP4K kinase evm_27.TU.AmTr_v1.0_scaffold00055.138 0.9002396011042155 46 AMTR_s00002p00258740 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.427 0.8983404698956194 56 AMTR_s00125p00115160 evm_27.TU.AmTr_v1.0_scaffold00125.29 0.89823581631858 48 AMTR_s00021p00207790 evm_27.TU.AmTr_v1.0_scaffold00021.180 0.8981189130499044 49 AMTR_s00077p00182530 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.207 0.8980926281672864 55 AMTR_s00120p00067860 Protein modification.S-nitrosylation and denitrosylation.GSNOR S-nitrosoglutathione reductase evm_27.TU.AmTr_v1.0_scaffold00120.32 0.8964982907426382 54 AMTR_s00004p00159650 Replication factor C subunit 1 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00004.171 0.8964819012200572 69 AMTR_s00024p00082030 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00024.39 0.8957917139879765 57 AMTR_s00061p00167160 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIf basal transcription factor complex.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00061.171 0.8955269346792218 58 AMTR_s00119p00032770 Multi-process regulation.Rop GTPase regulatory system.RopGEF guanine nucleotide exchange activities.DHR2-type exchange factor evm_27.TU.AmTr_v1.0_scaffold00119.17 0.8948399256441388 97 AMTR_s00022p00074370 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp16 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00022.54 0.8942719883703129 64 AMTR_s00040p00218420 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.small subunit evm_27.TU.AmTr_v1.0_scaffold00040.235 0.8940808692499945 65 AMTR_s00017p00130610 DDB1- and CUL4-associated factor homolog 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00017.53 0.8937922026348604 68 AMTR_s00086p00132870 evm_27.TU.AmTr_v1.0_scaffold00086.75 0.8933301466358256 69 AMTR_s00066p00115970 evm_27.TU.AmTr_v1.0_scaffold00066.108 0.8933020278306321 70 AMTR_s00041p00123630 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component evm_27.TU.AmTr_v1.0_scaffold00041.92 0.8931995547700862 93 AMTR_s00001p00272900 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.8930555725425167 72 AMTR_s00029p00238480 evm_27.TU.AmTr_v1.0_scaffold00029.400 0.8923110284250015 73 AMTR_s00110p00152340 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-II complex-specific components.TRS130/CLUB component evm_27.TU.AmTr_v1.0_scaffold00110.129 0.8920862170058388 74 AMTR_s00148p00090060 Helicase protein MOM1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00148.61 0.8916278047754818 93 AMTR_s00027p00222730 evm_27.TU.AmTr_v1.0_scaffold00027.93 0.8914865575823371 76 AMTR_s00019p00168020 Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.166 0.8908823521682693 77 AMTR_s00155p00082980 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor evm_27.TU.AmTr_v1.0_scaffold00155.56 0.8907395934131921 78 AMTR_s00024p00250820 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.DCP5 regulatory component evm_27.TU.AmTr_v1.0_scaffold00024.336 0.8896525892471572 82 AMTR_s00029p00245860 RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA Cap-Binding complex (CBC).CBP80 component evm_27.TU.AmTr_v1.0_scaffold00029.440 0.8893083626716337 84 AMTR_s00066p00043610 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.2-isopropylmalate synthase evm_27.TU.AmTr_v1.0_scaffold00066.21 0.8878921439371853 89 AMTR_s00005p00166730 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.type-1A topoisomerase TOP3b evm_27.TU.AmTr_v1.0_scaffold00005.51 0.8858055674173054 91 AMTR_s00019p00154210 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ21/22 splicing factor evm_27.TU.AmTr_v1.0_scaffold00019.143 0.8853910593769869 94 AMTR_s00052p00100800 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.DXS 1-deoxy-D-xylulose 5-phosphate synthase evm_27.TU.AmTr_v1.0_scaffold00052.29 0.8845359048782646 95 AMTR_s00062p00149800 evm_27.TU.AmTr_v1.0_scaffold00062.138 0.8839086796566077 98