Sequence Description Alias PCC hrr Smo99756 Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana 0.9486459831909771 2 Smo440463 Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana 0.9484245088540144 2 Smo438708 Polyadenylate-binding protein-interacting protein 7 OS=Arabidopsis thaliana 0.9476138772514522 3 Smo176627 Protein translocation.chloroplast.inner envelope Sec2 post-import insertion system.SecA2 component 0.9436755627690043 6 Smo90823 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED14 component 0.9412860283850687 13 Smo404798 Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase 0.9352162780090609 6 Smo139717 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP98 nucleoporin 0.9317627975639101 7 Smo403529 0.9309563636194251 8 Smo160385 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.large subunit 0.9286776600429195 12 Smo169728 RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase 0.9281178783283878 10 Smo80176 Carbohydrate metabolism.starch metabolism.synthesis.starch synthase activities.SSI-type starch synthase 0.9275763611210724 11 Smo115934 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI3 component 0.9265231098089171 12 Smo90720 RNA biosynthesis.transcriptional activation.ARR-B transcription factor 0.9250699474106352 13 Smo88336 0.9245165468929613 26 Smo150233 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF-QO electron transfer flavoprotein-ubiquinone oxidoreductase 0.9240011746489535 19 Smo438209 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) 0.9236986039037819 18 Smo177376 Short integuments 2, mitochondrial OS=Arabidopsis thaliana 0.9230613125500773 17 Smo170139 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana 0.9226286898848202 30 Smo182539 Vesicle trafficking.autophagosome formation.ATG1-13 autophagosome assembly control complex.ATG11 multifunctional scaffold component 0.9216946302793954 19 Smo164536 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 1036.8) & Mannosylglycoprotein endo-beta-mannosidase OS=Arabidopsis thaliana 0.9211177835052091 20 Smo266713 Solute transport.channels.MIP family.tonoplast intrinsic protein (TIP-type) 0.9205879376900545 21 Smo407447 Nutrient uptake.copper uptake.reduction-based uptake.COPT Cu(+) transporter 0.9204582630899805 22 Smo167789 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH7/9 component 0.9200419913221917 23 Smo102692 Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.BRO1 deubiquitinase recruiting protein 0.9186469667569489 24 Smo79007 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) 0.9174693130385195 25 Smo85961 Protein translocation.chloroplast.inner envelope Sec2 post-import insertion system.SecA2 component 0.9170954983260389 26 Smo129262 Multi-process regulation.Rop GTPase regulatory system.RopGEF guanine nucleotide exchange activities.DHR2-type exchange factor 0.9169970456330904 27 Smo414216 mRNA cap guanine-N7 methyltransferase 2 OS=Oryza sativa subsp. japonica 0.9166195303961565 28 Smo413509 Multi-process regulation.TOR signalling pathway.TORC complex.TOR kinase component 0.9151338751284332 29 Smo117217 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor 0.9145754927166986 30 Smo437272 0.9134656684486147 31 Smo103506 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.bacterial elicitor response.BSK1 kinase 0.9126235237985028 32 Smo405044 0.9125095086189796 33 Smo164653 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH4/11 component 0.9123565818772317 34 Smo438275 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.9101234722603023 35 Smo165973 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana 0.9089496508056468 36 Smo168303 Acylamino-acid-releasing enzyme 1 OS=Oryza sativa subsp. japonica 0.9086491025954371 37 Smo180368 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor 0.9084377322397258 68 Smo415212 0.9076667140364073 57 Smo93278 Solute transport.channels.AMT family.ammonium transporter (AMT2/3-type) 0.9069225439037236 40 Smo439584 0.9055911037848443 41 Smo421271 0.9031131647957652 42 Smo445651 0.9030821864441171 43 Smo85532 0.9027771076596361 44 Smo168663 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED5/MED24/MED33 component 0.902373089504691 45 Smo412251 0.9010565746022698 46 Smo441144 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.9007114277356545 47 Smo109501 Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana 0.9005271225047109 48 Smo415315 Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana 0.9001748601250583 49 Smo164675 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone 0.9001304751251534 87 Smo270796 Fatty acid amide hydrolase OS=Arabidopsis thaliana 0.9001062521628024 51 Smo159063 Protein modification.phosphorylation.CMGC kinase superfamily.GSK kinase 0.898766312391958 53 Smo404055 RNA biosynthesis.transcriptional activation.HUA2 transcription factor 0.8985126195631392 55 Smo403640 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase-activating protein (RAB-GAP) 0.8982551375726681 56 Smo111871 Protein translocation.peroxisome.importomer translocation system.receptor export system.Pex1-Pex6 subcomplex.Pex6 component 0.8977677522565777 57 Smo442688 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component 0.8972331448587901 58 Smo409587 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component 0.8972120179162699 59 Smo101367 0.8966108778670391 60 Smo79650 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase 0.8961776740133808 61 Smo424372 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.8959677977946915 62 Smo70673 RNA processing.RNA decay.exosome complex.associated co-factors.SOP1 RNA degradation surveillance factor 0.8953533448893385 63 Smo177798 Cell wall.callose.callose synthase 0.8951431162728097 64 Smo90313 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor 0.8946216821517208 66 Smo109857 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.8944959657903314 67 Smo439313 0.894474526190499 68 Smo159012 Protein modification.O-linked glycosylation.serine/threonine O-linked glycosylation.SPY O-fucosyltransferase 0.8940007926098995 69 Smo96969 Amino acid metabolism.degradation.aromatic amino acid.tyrosine.fumarylacetoacetate hydrolase 0.8939753885192978 70 Smo130461 Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter 0.8928712316435881 71 Smo100054 RNA processing.RNA modification.uridylation.URT1 uridylyltransferase 0.892262674543025 72 Smo104811 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.PTB-type splicing factor 0.8916296626473682 75 Smo406265 0.8910947197615138 76 Smo180454 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCb-type E3 ligase 0.8907399527723252 77 Smo110201 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 1 0.8906273301191343 78 Smo441948 Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana 0.8906172746910167 79 Smo177195 RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor 0.8904939928860578 80 Smo66294 Trihelix transcription factor GTL1 OS=Arabidopsis thaliana 0.8895473061779348 85 Smo440732 CAX-interacting protein 4 OS=Arabidopsis thaliana 0.8888374781602643 86 Smo164100 0.8887776654134968 87 Smo80442 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.bifunctional homoserine dehydrogenase and aspartate kinase 0.8884557373347877 88 Smo168492 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.type-1A topoisomerase TOP3b 0.8883883847417116 89 Smo438136 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor 0.8874476588754856 91 Smo115678 Protein translocation.peroxisome.importomer translocation system.receptor export system.Pex1-Pex6 subcomplex.Pex1 component 0.8873863758260392 92 Smo444433 0.8873613344381167 93 Smo76216 Protein modification.phosphorylation.STE kinase superfamily.MAP3K-MEKK kinase 0.8873512021759175 94 Smo437944 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor 0.8872900483239867 95 Smo124813 Probable GTP-binding protein OBGC2 OS=Oryza sativa subsp. japonica 0.8872866106853107 96 Smo402278 RNA biosynthesis.transcriptional repression.AFP/NINJA transcriptional co-repressor 0.8871838356545539 97 Smo417312 Acyl-CoA-binding domain-containing protein 5 OS=Arabidopsis thaliana 0.8868371886573228 98 Smo164111 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) 0.8868032854517723 99 Smo440923 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component 0.8866063588708729 100