Sequence Description Alias PCC hrr Smo406852 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 164.1) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.9281148815317679 6 Smo416844 0.9260184234315825 5 Smo442872 0.9181468514167992 7 Smo442385 Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana 0.9144023499802088 4 Smo440740 Protein modification.peptide maturation.plastid.SPP stromal processing peptidase 0.9074335411346222 13 Smo12954 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 0.9063145423486295 12 Smo407721 Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica 0.9043214309824413 10 Smo448320 Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana 0.9037393945847565 27 Smo77276 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana 0.9024094687319969 20 Smo128521 Photosynthesis.photophosphorylation.ATP synthase complex.assembly.CGL160 factor 0.8995906953693653 17 Smo419303 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase 0.8990946108965094 31 Smo146755 0.897093966306373 19 Smo75404 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter 0.896255759370907 13 Smo152929 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 0.89496563370262 31 Smo438647 Multi-process regulation.circadian clock.TOC1 evening oscillator component 0.8942267381587519 15 Smo430784 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component 0.8939991944190571 17 Smo271998 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8883842822892972 17 Smo96554 Nucleotide metabolism.pyrimidines.ribonucleotide anabolism.CTP synthetase 0.8869361145664909 22 Smo141109 0.8826035015808268 28 Smo80721 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.8821600571640007 23 Smo442726 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) 0.8782688221578845 40 Smo166773 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana 0.8770584327436688 54 Smo58058 Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana 0.8750166073986736 25 Smo73844 0.8744280128389961 28 Smo135281 Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana 0.8734141061327106 25 Smo422148 Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana 0.8727847249156151 26 Smo418465 0.8722769020068908 50 Smo83744 Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase 0.871181762920262 28 Smo130412 OTU domain-containing protein At3g57810 OS=Arabidopsis thaliana 0.8697634094471617 29 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.8696394407015683 67 Smo410333 0.8695940823147967 75 Smo444786 0.8693074876604105 43 Smo421525 Peroxidase 4 OS=Vitis vinifera 0.8690325315377293 33 Smo172755 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-IV kinase 0.8668115701533193 34 Smo429547 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Ris1 chromatin remodeling factor 0.8667506870207236 68 Smo95815 Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana 0.8646487118746595 36 Smo30598 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.8628324274962036 66 Smo152047 Protein modification.peptide maturation.mitochondrion.PreP organellar peptidasome 0.8626140662809151 71 Smo73985 RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana 0.8619346409550245 50 Smo444048 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2 OS=Arabidopsis thaliana 0.8601496530152358 40 Smo409004 Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana 0.8598790673171642 76 Smo168153 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein 0.8587396833376811 59 Smo163827 Beta-glucosidase 25 OS=Oryza sativa subsp. japonica 0.8581608487144408 43 Smo12282 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8567541302918592 58 Smo74924 0.8564650852484695 61 Smo85072 Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana 0.8529937891760541 46 Smo99919 0.8527050519090282 47 Smo447716 0.8526995506501044 63 Smo419739 0.8514479523638807 50 Smo84550 SH2 domain-containing protein A OS=Arabidopsis thaliana 0.8511191925327468 51 Smo136585 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.8506656912543014 52 Smo270181 0.8479784277850594 53 Smo93752 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein 0.8477038042281814 73 Smo84784 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease 0.8475299027736335 77 Smo61778 0.8473083620948895 56 Smo170091 Lipid metabolism.galactolipid and sulfolipid synthesis.UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 0.8463357325295153 67 Smo418636 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC13 component 0.8463072709522202 83 Smo91321 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.8459426695076727 99 Smo150329 Subtilisin-like protease SBT5.3 OS=Arabidopsis thaliana 0.8456923195981818 61 Smo80789 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 158.0) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8434979271436116 62 Smo406591 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.DAC factor 0.8408284578481313 66 Smo90520 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 0.8406231814304411 84 Smo10677 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor 0.8404906425733641 71 Smo152730 Coenzyme metabolism.thiamine pyrophosphate synthesis.hydroxymethylpyrimidine diphosphate synthesis.hydroxymethylpyrimidine phosphate synthase (ThiC) 0.837252467083819 66 Smo418519 0.8356229824311066 67 Smo143057 0.8347561746149921 68 Smo78872 Secondary metabolism.nitrogen-containing secondary compounds.alkaloids.indole alkaloid synthesis.aromatic L-amino acid decarboxylase 0.8346845465461116 69 Smo103638 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana 0.834541955574363 83 Smo82310 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP 0.8326595292501195 97 Smo230648 Solute transport.carrier-mediated transport.CPA superfamily.CPA-1 family.proton:sodium cation antiporter (NHX-type) 0.8320826448737303 73 Smo102611 RNA processing.organelle machineries.ribonuclease activities.RNase J endoribonuclease 0.8310103298857678 100 Smo270688 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component 0.8302230863241473 75 Smo99603 DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica 0.8283971726340353 77 Smo52692 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana 0.8264630145446641 81 Smo443419 0.822979400374344 95 Smo74444 Vesicle trafficking.target membrane tethering.Exocyst complex.EXO70 component 0.8225576155333376 89 Smo445274 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst 0.8213548070556076 90 Smo89270 Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica 0.8207424948789636 91 Smo166787 F-box protein At1g55000 OS=Arabidopsis thaliana 0.820439808955936 92 Smo74506 Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 OS=Arabidopsis thaliana 0.8182334466895925 97 Smo71323 Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana 0.8176779990986225 98 Smo438080 Solute transport.carrier-mediated transport.MFS superfamily.NRT1/PTR anion transporter 0.8173254697423618 99 Smo437639 0.8170125289064825 100