Sequence Description Alias PCC hrr Smo174616 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 0.9600556937137186 1 Smo143134 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL1 component 0.9250982330101399 10 Smo144149 PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana 0.9180538092374412 3 Smo25109 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase 0.915736562342771 4 Smo90536 Protein modification.S-glutathionylation and deglutathionylation.glutathione S-transferase activities.class lambda 0.9149970347193926 21 Smo92189 Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase 0.9132941498413355 7 Smo270406 Nucleotide metabolism.purines.phosphotransfers.adenylate kinase 0.9076813813773547 7 Smo437487 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.CbbY xylulose-1,5-bisphosphate phosphatase 0.9055263244441241 9 Smo271018 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component 0.9054843893656652 18 Smo429956 0.9045534905450271 16 Smo131328 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase 0.9018352255696878 12 Smo61985 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF107 transcript stability factor 0.9017497519484885 12 Smo229587 Prolycopene isomerase 1, chloroplastic OS=Oncidium hybrid cultivar 0.9011456735659983 13 Smo413295 Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana 0.9004734239300991 14 Smo443172 Fruit protein pKIWI502 OS=Actinidia deliciosa 0.9001773517199536 15 Smo104804 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCq component 0.8990138104791138 16 Smo148692 Protein biosynthesis.organelle translation machineries.translation initiation.IF-2 initiation factor 0.8958072027789896 17 Smo63559 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana 0.8945785223267888 40 Smo95494 0.8925525833349135 19 Smo117112 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor 0.8889388259319141 32 Smo423983 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG 0.8863999687358237 29 Smo177791 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase 0.8848210072728113 22 Smo440582 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana 0.8834905062476713 62 Smo404832 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC5 component 0.883467801451336 31 Smo103361 0.8833708072314338 38 Smo405094 Elongation factor G-2, chloroplastic OS=Glycine max 0.8826552020065259 26 Smo141857 Protein biosynthesis.organelle translation machineries.translation termination.PrfA-type peptide chain release factor 0.8818361777273817 27 Smo423707 0.8816021312448086 67 Smo181802 L-gulonolactone oxidase 3 OS=Arabidopsis thaliana 0.8815451708515443 34 Smo446143 COP1-interactive protein 1 OS=Arabidopsis thaliana 0.8806879056160647 30 Smo101001 Solute transport.carrier-mediated transport.CLC anion channel / anion:proton antiporter 0.8788941794928238 31 Smo437225 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase 0.8781238766294315 78 Smo96317 Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana 0.8764794580807836 33 Smo448328 Photosynthesis.photophosphorylation.pseudo-cyclic electron flow.flavodiiron protein 0.8756497336165997 65 Smo438881 Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana 0.8752118138424418 35 Smo228849 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease 0.8751740622430642 36 Smo438082 Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease 0.8750205854300576 37 Smo74261 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum 0.8747376425694652 75 Smo82264 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase 0.873686213716355 39 Smo97903 Photosynthesis.photorespiration.glycerate kinase 0.8721074350557071 40 Smo98333 External stimuli response.drought.stomatal closure signalling.CAS calcium sensor 0.871344275227638 41 Smo432611 Protein degradation.peptidase families.aspartic-type peptidase activities.pepsin-type protease 0.8705754965152126 42 Smo439600 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.8690583531988078 63 Smo93338 Solute transport.carrier-mediated transport.APC superfamily.HAAAP-type aromatic amino acid transporter 0.8689634376390337 44 Smo85565 0.8684798474080133 45 Smo75294 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR1 0.8670370768406964 46 Smo109632 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.ndhA-specific mRNA splicing factor 0.8666665600074905 47 Smo164683 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase 0.8656784838893777 48 Smo233481 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor 0.8656423993069879 49 Smo64073 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-D component 0.8649386678161073 50 Smo51301 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) 0.8641676384907611 93 Smo420519 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.typical 2-Cys peroxiredoxin (2-CysPrx) 0.8634767560293671 52 Smo174737 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana 0.8630764979033012 53 Smo60716 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor 0.8627348413677224 87 Smo438354 0.8623013087501883 55 Smo272235 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO 0.862166112406154 56 Smo57383 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC16 component 0.8611067198546153 57 Smo182694 Photosynthesis.calvin cycle.phosphoribulokinase 0.8604639141483862 77 Smo271457 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase 0.8600677542034105 59 Smo116848 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase 0.860056866316847 60 Smo271184 0.8590653317425797 61 Smo227735 Redox homeostasis.enzymatic reactive oxygen species scavengers.superoxide dismutase activities.copper/zinc superoxide dismutase 0.8585222566094965 62 Smo419497 0.8580330612259481 63 Smo413416 Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana 0.8576060302055128 64 Smo55147 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase 0.857196110035373 66 Smo81992 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor 0.8571156600501217 66 Smo85675 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL29 component 0.856795858700056 67 Smo172681 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase 0.856061952939485 86 Smo81134 0.854877874432933 70 Smo71251 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpP1/3-6 proteolytic core component 0.8536091869454929 71 Smo139232 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 0.8535577265989478 80 Smo447828 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 0.8532739637021778 73 Smo145597 Cytochrome P450 97B2, chloroplastic OS=Glycine max 0.8529709704773094 74 Smo449377 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO 0.8528669306387997 75 Smo170624 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component 0.8527366383062316 80 Smo73285 0.8524928363744052 95 Smo141299 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana 0.8521437462218371 78 Smo93357 Solute transport.carrier-mediated transport.APC superfamily.HAAAP-type aromatic amino acid transporter 0.8508676214549636 79 Smo232430 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase 0.8503014977330051 85 Smo30996 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.RH3 basal splicing factor 0.8487888467073951 81 Smo228435 Photosynthesis.calvin cycle.phosphopentose epimerase 0.8478355485708485 84 Smo403333 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana 0.8477982611351488 85 Smo85818 Protein modification.phosphorylation.TKL kinase superfamily.LRR-II kinase 0.8477354026247997 86 Smo107842 Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. indica 0.8474903011289439 87 Smo65351 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component 0.8474334913605657 88 Smo174833 Photosynthesis.calvin cycle.fructose-1,6-bisphosphatase 0.8460050304212711 96 Smo269565 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.red chlorophyll catabolite reductase (RCCR) 0.8457605649251626 91 Smo272095 Photosynthesis.photorespiration.glycine cleavage system.T-protein aminomethyltransferase component 0.8451601055208161 94 Smo155359 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.Fd-dependent glutamate synthase 0.8450997557363797 97 Smo97487 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor(50.1.3 : 302.1) & Isoflavone reductase homolog IRL1 OS=Ginkgo biloba 0.8449071386966723 96 Smo120984 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.mitochondrial tRNA threonylcarbamoyl transferase 0.8445071544623189 97 Smo183274 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF173 protein 0.8442789658702419 98 Smo33324 Solute transport.carrier-mediated transport.MFS superfamily.NGT N-acetylglucosamine transporter 0.8439687749434368 99 Smo99197 D-aminoacyl-tRNA deacylase OS=Arabidopsis thaliana 0.8438228268163905 100