Sequence Description Alias PCC hrr Smo442726 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) 0.9495898635146209 3 Smo93752 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein 0.9440773381488641 3 Smo135281 Pentatricopeptide repeat-containing protein At5g42310, chloroplastic OS=Arabidopsis thaliana 0.940612235230063 3 Smo419303 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase 0.9304426583890257 7 Smo52692 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana 0.9244190065395026 5 Smo77276 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana 0.9194898054162521 11 Smo407721 Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica 0.9181651633086267 7 Smo75404 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter 0.9152000941872456 8 Smo448320 Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana 0.9143382680915136 21 Smo406852 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 164.1) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.9132602016925131 16 Smo12282 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.9100078507772821 14 Smo146971 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase 0.9065996173644854 12 Smo85032 Alpha-galactosidase 3 OS=Arabidopsis thaliana 0.9003318131254079 13 Smo173467 Phytohormones.strigolactone.synthesis.DWARF27 biosynthesis protein 0.8995377348418755 14 Smo270181 0.8985772245868567 15 Smo58058 Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana 0.897762031687431 16 Smo89270 Putative GTP diphosphokinase RSH1, chloroplastic OS=Oryza sativa subsp. japonica 0.8959312673257698 17 Smo418636 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC13 component 0.895150103509606 27 Smo172755 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-IV kinase 0.8932056651780604 19 Smo61778 0.8905929815028207 20 Smo152929 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 0.8840814863412865 49 Smo146755 0.8822184504481316 32 Smo177598 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.malonyl-CoA synthetase (mtMCS) 0.8821600571640007 23 Smo271998 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8816339724641629 24 Smo73844 0.8792362229880405 25 Smo136585 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.8779940659232983 26 Smo416844 0.8758451087579208 38 Smo74924 0.8757599461600157 37 Smo118724 0.8741480473020753 59 Smo440740 Protein modification.peptide maturation.plastid.SPP stromal processing peptidase 0.8726603947146392 44 Smo438182 0.8725282910173768 36 Smo168153 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein 0.8718530172912865 42 Smo271353 Coenzyme metabolism.NAD/NADP biosynthesis.de-novo pathway.quinolinate phosphoribosyl transferase 0.8712388511200122 52 Smo421525 Peroxidase 4 OS=Vitis vinifera 0.8691063820590397 34 Smo156007 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component 0.8682561991550903 44 Smo103517 Phytohormones.gibberellin.synthesis.ent-kaurene oxidase 0.8676853169973664 36 Smo270688 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component 0.8661051055458848 40 Smo170011 0.8649834354230302 38 Smo128521 Photosynthesis.photophosphorylation.ATP synthase complex.assembly.CGL160 factor 0.8634830083919254 58 Smo90520 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 0.8630349742183866 55 Smo430784 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component 0.8620507788044888 58 Smo442385 Protein DMR6-LIKE OXYGENASE 2 OS=Arabidopsis thaliana 0.8608483680184391 42 Smo83448 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor 0.8588997185358783 46 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.858551016454688 93 Smo91298 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VII/NDR kinase 0.8572522644581497 66 Smo170091 Lipid metabolism.galactolipid and sulfolipid synthesis.UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 0.8570336734083879 51 Smo402209 0.8559225500184148 47 Smo403724 DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana 0.8557265121337944 48 Smo163827 Beta-glucosidase 25 OS=Oryza sativa subsp. japonica 0.8537362676177495 49 Smo447716 0.8533974061440661 62 Smo430412 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8532811382108257 51 Smo127024 0.8518192493238409 53 Smo152047 Protein modification.peptide maturation.mitochondrion.PreP organellar peptidasome 0.8517534601038687 79 Smo30598 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.8513564929787472 80 Smo65804 Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica 0.8506522299076322 56 Smo75698 GTPase ERA1, chloroplastic OS=Zea mays 0.8468199650853082 100 Smo66389 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGRL1-like component 0.8461495390159199 58 Smo12954 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.ALB3 component 0.843290785001724 75 Smo164116 0.842005184309739 61 Smo143057 0.8413622935154552 62 Smo80789 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 158.0) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8407002983856036 63 Smo84784 RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease 0.8391517063479392 88 Smo117159 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor 0.8384474023646965 76 Smo174928 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.pheophorbide a oxygenase (PAO) 0.8371335572705497 67 Smo442094 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS3 CORVET-specific component 0.8336142473973925 68 Smo418519 0.8311120669690089 70 Smo141010 RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor 0.8294502390496034 72 Smo78872 Secondary metabolism.nitrogen-containing secondary compounds.alkaloids.indole alkaloid synthesis.aromatic L-amino acid decarboxylase 0.8293763631584622 73 Smo164227 Putative nitric oxide synthase OS=Oryza sativa subsp. japonica 0.8266936949272001 95 Smo413295 Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana 0.8259212045311308 76 Smo270556 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana 0.824352981554203 100 Smo447679 Leucine-rich repeat-containing protein ODA7 OS=Chlamydomonas reinhardtii 0.8242884858321597 78 Smo228619 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase 0.8242611966642669 79 Smo438647 Multi-process regulation.circadian clock.TOC1 evening oscillator component 0.8240078757250106 80 Smo405512 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC17 component 0.8238642914094035 100 Smo442087 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HPE1 splicing factor 0.823761399469426 82 Smo404255 Leucine-rich repeat-containing protein ODA7 OS=Chlamydomonas reinhardtii 0.8235990396620435 83 Smo99402 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCB cytochrome b6 maturation system (system IV).CCB1 component 0.8208425185804513 86 Smo141109 0.8204279274463175 88 Smo130412 OTU domain-containing protein At3g57810 OS=Arabidopsis thaliana 0.820373385936011 89 Smo75780 DUF21 domain-containing protein At1g55930, chloroplastic OS=Arabidopsis thaliana 0.8201892670122828 90 Smo83859 0.8182947123756396 93 Smo48536 Probable ribosome-binding factor A, chloroplastic OS=Arabidopsis thaliana 0.8158190396607155 96 Smo422148 Probable plastid-lipid-associated protein 10, chloroplastic OS=Arabidopsis thaliana 0.8141724527833789 98 Smo67117 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpP1/3-6 proteolytic core component 0.813742450649495 99