Sequence Description Alias PCC hrr AMTR_s00016p00145050 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT4 delta subunit evm_27.TU.AmTr_v1.0_scaffold00016.100 0.9322643667759949 1 AMTR_s00011p00224870 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.carbonic anhydrase component evm_27.TU.AmTr_v1.0_scaffold00011.101 0.9154030168476451 2 AMTR_s00071p00150630 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.RNPS1 component evm_27.TU.AmTr_v1.0_scaffold00071.136 0.9136973051043424 3 AMTR_s00003p00257690 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TPLATE component evm_27.TU.AmTr_v1.0_scaffold00003.321 0.9021505343816418 4 AMTR_s00108p00135260 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase evm_27.TU.AmTr_v1.0_scaffold00108.39 0.8996533965571162 5 AMTR_s00105p00058690 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RACK1 associated component evm_27.TU.AmTr_v1.0_scaffold00105.26 0.896027217106547 7 AMTR_s00002p00206060 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3d component evm_27.TU.AmTr_v1.0_scaffold00002.205 0.8871536241271399 9 AMTR_s00001p00246890 evm_27.TU.AmTr_v1.0_scaffold00001.300 0.8871287788421919 41 AMTR_s00019p00253580 RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor evm_27.TU.AmTr_v1.0_scaffold00019.427 0.8870826917636625 9 AMTR_s00099p00093470 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop1/fibrillarin methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00099.70 0.8862155467880433 10 AMTR_s00153p00050640 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00153.22 0.8851747803575641 11 AMTR_s00089p00034850 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component evm_27.TU.AmTr_v1.0_scaffold00089.9 0.8811944753503507 64 AMTR_s00016p00095700 evm_27.TU.AmTr_v1.0_scaffold00016.55 0.8809452335850974 13 AMTR_s00039p00228400 evm_27.TU.AmTr_v1.0_scaffold00039.211 0.8803884236725946 28 AMTR_s00101p00151570 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL4 component evm_27.TU.AmTr_v1.0_scaffold00101.126 0.879707236295036 24 AMTR_s00025p00194920 Solute transport.primary active transport.VHP PPase family.VHP2 proton-translocating pyrophosphatase evm_27.TU.AmTr_v1.0_scaffold00025.245 0.8776139225578425 31 AMTR_s00067p00111230 Solute transport.carrier-mediated transport.MC-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00067.89 0.8774282509724931 17 AMTR_s00068p00134210 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00068.92 0.8765319640813733 18 AMTR_s00007p00244990 evm_27.TU.AmTr_v1.0_scaffold00007.262 0.8762706783738563 31 AMTR_s00069p00037980 evm_27.TU.AmTr_v1.0_scaffold00069.20 0.8756018354949332 20 AMTR_s00023p00210090 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.fungal elicitor response.PBL27/RLCK185 kinase evm_27.TU.AmTr_v1.0_scaffold00023.153 0.8753362634247839 56 AMTR_s00099p00155940 RNA biosynthesis.transcriptional activation.Alfin-like transcription factor evm_27.TU.AmTr_v1.0_scaffold00099.152 0.8693575288342233 56 AMTR_s00002p00263460 Flowering locus K homology domain OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.479 0.8692734424685975 26 AMTR_s00058p00175640 Protein modification.lipidation.Cys-linked prenylation.type-I protein prenyltransferase complex.subunit beta evm_27.TU.AmTr_v1.0_scaffold00058.165 0.868363167645822 59 AMTR_s00107p00122980 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00107.39 0.8677587033758785 25 AMTR_s00017p00257730 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS7 component evm_27.TU.AmTr_v1.0_scaffold00017.290 0.866905706676065 26 AMTR_s00176p00038570 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A2 component evm_27.TU.AmTr_v1.0_scaffold00176.14 0.8665251268437916 27 AMTR_s00110p00131200 Solute transport.primary active transport.P-type ATPase superfamily.P5 family.MIA P5-type cation-transporting ATPase evm_27.TU.AmTr_v1.0_scaffold00110.105 0.8620448826801412 68 AMTR_s00019p00079600 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00019.55 0.8616357682771575 31 AMTR_s00001p00272450 evm_27.TU.AmTr_v1.0_scaffold00001.529 0.8599467224767391 32 AMTR_s00018p00188200 Cytoskeleton.microfilament network.actin filament protein evm_27.TU.AmTr_v1.0_scaffold00018.104 0.8598391669178881 33 AMTR_s00040p00169390 evm_27.TU.AmTr_v1.0_scaffold00040.144 0.8595677073470712 34 AMTR_s00111p00143660 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.124 0.8580153767993371 43 AMTR_s00009p00267190 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.large subunit evm_27.TU.AmTr_v1.0_scaffold00009.402 0.8578921938133055 73 AMTR_s00092p00041800 BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.17 0.8577961087932565 37 AMTR_s00066p00161070 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).snRNP40/U5-40kDa snRNP component evm_27.TU.AmTr_v1.0_scaffold00066.171 0.8577922980272519 73 AMTR_s00024p00240910 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component evm_27.TU.AmTr_v1.0_scaffold00024.283 0.8542007968959175 40 AMTR_s00022p00238440 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.beta subunit evm_27.TU.AmTr_v1.0_scaffold00022.334 0.8525891516202412 59 AMTR_s00011p00092240 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.PMD division factor evm_27.TU.AmTr_v1.0_scaffold00011.24 0.8494439567555406 47 AMTR_s00013p00226180 UPF0235 protein At5g63440 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00013.170 0.8490700004170317 50 AMTR_s00106p00025830 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3k component evm_27.TU.AmTr_v1.0_scaffold00106.7 0.8481905661484822 79 AMTR_s00078p00131720 Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.109 0.8471625474823832 89 AMTR_s00029p00231170 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPP0 component evm_27.TU.AmTr_v1.0_scaffold00029.368 0.846842095401887 62 AMTR_s00007p00244860 evm_27.TU.AmTr_v1.0_scaffold00007.261 0.8444842268530307 54 AMTR_s00179p00011640 evm_27.TU.AmTr_v1.0_scaffold00179.1 0.8430010515958353 98 AMTR_s00022p00149810 AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.146 0.8427583548817169 77 AMTR_s00101p00119280 Protein FLX-like 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.92 0.8423149045502162 57 AMTR_s00128p00027720 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00128.7 0.8423001698831917 58 AMTR_s00055p00026270 evm_27.TU.AmTr_v1.0_scaffold00055.7 0.8420690878454863 59 AMTR_s00051p00157540 Amino acid metabolism.biosynthesis.serine family.non-photorespiratory serine.phosphoglycerate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00051.59 0.8413928827679765 60 AMTR_s00002p00165660 RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase regulatory protein evm_27.TU.AmTr_v1.0_scaffold00002.139 0.8408350021194773 61 AMTR_s00072p00034700 Universal stress protein PHOS32 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.7 0.8403533680534351 62 AMTR_s00057p00133180 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).U1C snRNP component evm_27.TU.AmTr_v1.0_scaffold00057.115 0.8398837747552172 64 AMTR_s00010p00158940 Protein modification.phosphorylation.TKL kinase superfamily.LRR-III kinase evm_27.TU.AmTr_v1.0_scaffold00010.122 0.8395744735097889 94 AMTR_s00006p00242700 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.SWA1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00006.119 0.8382454145300703 97 AMTR_s00116p00129050 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL3-BTB E3 ligase complexes.BTB/POZ substrate adaptor components.LRB-type component evm_27.TU.AmTr_v1.0_scaffold00116.32 0.8376074949087906 70 AMTR_s00006p00059970 Cellular respiration.oxidative phosphorylation.ATP synthase complex.peripheral MF1 subcomplex.subunit beta evm_27.TU.AmTr_v1.0_scaffold00006.17 0.8350923956120563 74 AMTR_s00038p00238890 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS6 component evm_27.TU.AmTr_v1.0_scaffold00038.246 0.834459974961173 77 AMTR_s00001p00273090 Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.593 0.8341847321765723 88 AMTR_s00029p00109050 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL8 component evm_27.TU.AmTr_v1.0_scaffold00029.114 0.8339231394803946 80 AMTR_s00115p00015570 Lipid metabolism.lipid degradation.fatty acid degradation.glyoxylate cycle.peroxisomal aconitase evm_27.TU.AmTr_v1.0_scaffold00115.1 0.8338567696834817 91 AMTR_s00077p00183650 Enzyme classification.EC_5 isomerases.EC_5.4 intramolecular transferase evm_27.TU.AmTr_v1.0_scaffold00077.211 0.8303049736379953 87 AMTR_s00001p00116440 evm_27.TU.AmTr_v1.0_scaffold00001.84 0.8292985203168146 89 AMTR_s00041p00084080 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPSa component evm_27.TU.AmTr_v1.0_scaffold00041.50 0.8292521699500659 90 AMTR_s00019p00116110 Ubiquitin receptor RAD23b OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.92 0.8291725403945495 92 AMTR_s00059p00160430 Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.147 0.828949071903118 94 AMTR_s00105p00023120 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL4 component evm_27.TU.AmTr_v1.0_scaffold00105.4 0.8286386856126364 95 AMTR_s00061p00029690 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP54 component evm_27.TU.AmTr_v1.0_scaffold00061.4 0.8280217836414001 97 AMTR_s00045p00049310 Protein translocation.chloroplast.outer envelope insertion system.AKR2 chaperone evm_27.TU.AmTr_v1.0_scaffold00045.31 0.8262472491358669 99