Sequence Description Alias PCC hrr Smo63559 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana 0.9570924470594055 1 Smo448328 Photosynthesis.photophosphorylation.pseudo-cyclic electron flow.flavodiiron protein 0.9533516090370542 5 Smo437225 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase 0.9519536810331881 3 Smo90536 Protein modification.S-glutathionylation and deglutathionylation.glutathione S-transferase activities.class lambda 0.9431113702189199 4 Smo405876 0.9410098442978309 5 Smo423707 0.939593702974999 13 Smo413416 Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana 0.9383075021859467 7 Smo91144 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.HCF101 component 0.9305306192028252 15 Smo232430 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase 0.9258310865899189 9 Smo60716 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor 0.9255614034285397 10 Smo52887 Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsB component 0.9201414241251256 11 Smo74261 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum 0.9193650549624978 18 Smo104811 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.PTB-type splicing factor 0.9188256944688472 13 Smo169254 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana 0.918296303016675 14 Smo440582 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana 0.9165330520207134 15 Smo14478 0.9156206832048976 16 Smo166238 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein 0.9151680572887787 18 Smo411148 Pentatricopeptide repeat-containing protein At3g06920 OS=Arabidopsis thaliana 0.9139603278728875 18 Smo119009 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase 0.9124133629567245 19 Smo115078 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana 0.9087752601109579 20 Smo235693 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein 0.9084031723565855 25 Smo77425 RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase 0.9078012283408118 22 Smo73285 0.9077248780298773 23 Smo271018 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component 0.9056216577964225 24 Smo117112 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor 0.9050226523967122 25 Smo429956 0.9041226315829548 26 Smo270796 Fatty acid amide hydrolase OS=Arabidopsis thaliana 0.9018127579526233 27 Smo136561 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana 0.9013785251635591 28 Smo164536 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 1036.8) & Mannosylglycoprotein endo-beta-mannosidase OS=Arabidopsis thaliana 0.9000223796502477 31 Smo177176 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana 0.8993148099076628 30 Smo173339 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein 0.8987557160841692 37 Smo93150 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase 0.8985481895922938 32 Smo169553 0.8984378699586375 33 Smo155359 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.Fd-dependent glutamate synthase 0.8982170862432467 34 Smo79425 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.ATP-dependent activase 0.8980643978172193 35 Smo11088 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana 0.8969724558714011 36 Smo125820 Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana 0.8957247314211432 37 Smo79664 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.894737448085503 38 Smo234630 Probable amidase At4g34880 OS=Arabidopsis thaliana 0.8944367322050207 39 Smo268187 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.DXS 1-deoxy-D-xylulose 5-phosphate synthase 0.8939846865528374 40 Smo423983 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG 0.8922212146752069 41 Smo93338 Solute transport.carrier-mediated transport.APC superfamily.HAAAP-type aromatic amino acid transporter 0.8913907248757345 42 Smo182694 Photosynthesis.calvin cycle.phosphoribulokinase 0.8913430805033244 43 Smo181802 L-gulonolactone oxidase 3 OS=Arabidopsis thaliana 0.8908866459256296 44 Smo417577 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase 0.88949840516722 45 Smo420641 Probable zinc metalloprotease EGY1, chloroplastic OS=Arabidopsis thaliana 0.8880102658056882 46 Smo136782 0.8878607486368776 47 Smo79954 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).SOQ1 negative NPQ-regulator protein 0.8878321615056339 48 Smo424099 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana 0.8874968287596537 49 Smo141857 Protein biosynthesis.organelle translation machineries.translation termination.PrfA-type peptide chain release factor 0.8863555281489741 50 Smo271731 (S)-coclaurine N-methyltransferase OS=Thalictrum flavum subsp. glaucum 0.8863326583911051 51 Smo144881 UDP-glucose flavonoid 3-O-glucosyltransferase 6 OS=Fragaria ananassa 0.884208402175423 52 Smo107842 Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. indica 0.8833019804433412 53 Smo92189 Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase 0.8827073823647825 54 Smo103361 0.8824992858626631 55 Smo96794 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana 0.8820537659061696 56 Smo445517 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase 0.8812345391250882 57 Smo422731 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP4 protein 0.8790924003585968 58 Smo439518 Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana 0.8790645287471468 59 Smo175826 Protein EXECUTER 2, chloroplastic OS=Arabidopsis thaliana 0.8781683592414034 60 Smo268427 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase 0.8780243759916538 61 Smo230748 Carbohydrate metabolism.gluconeogenesis.pyruvate orthophosphate dikinase activity.pyruvate orthophosphate dikinase 0.877803153748203 62 Smo227615 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein 0.8777130438239673 63 Smo181800 0.8775006241051557 98 Smo73714 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.876723745060946 65 Smo61985 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF107 transcript stability factor 0.8759557866692257 66 Smo182539 Vesicle trafficking.autophagosome formation.ATG1-13 autophagosome assembly control complex.ATG11 multifunctional scaffold component 0.87567930667742 78 Smo438181 0.8752008498941635 68 Smo97487 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor(50.1.3 : 302.1) & Isoflavone reductase homolog IRL1 OS=Ginkgo biloba 0.8746662323231321 69 Smo75631 Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana 0.8742196787462176 70 Smo55147 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase 0.8740165526780495 71 Smo90782 Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana 0.8736110932505926 72 Smo98333 External stimuli response.drought.stomatal closure signalling.CAS calcium sensor 0.8735933494517664 73 Smo174616 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 0.8732583702464688 74 Smo438082 Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease 0.873149675717037 75 Smo109501 Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana 0.8730714027543713 76 Smo82264 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase 0.8725374992910016 77 Smo448162 PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana 0.8724943899757465 78 Smo228849 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease 0.8719749080237161 79 Smo413766 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.bifunctional methylthioribulose-1-phosphate dehydratase and enolase-phosphatase 0.8714556159687521 80 Smo418548 Haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 OS=Arabidopsis thaliana 0.8710540003626819 81 Smo64370 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor 0.8707050588096967 82 Smo183274 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF173 protein 0.8696828225585966 83 Smo82221 Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana 0.8695880676304469 84 Smo33324 Solute transport.carrier-mediated transport.MFS superfamily.NGT N-acetylglucosamine transporter 0.8692065728845253 85 Smo166450 Solute transport.carrier-mediated transport.MC-type solute transporter 0.8690580523777603 86 Smo101391 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-e lycopene epsilon cyclase 0.8684284334384108 87 Smo105841 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.assembly phase.NFS1 cysteine desulfurase component 0.8663563831084095 88 Smo127003 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) 0.8663242238111144 89 Smo170624 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component 0.8662111083872057 90 Smo439533 0.8661234111478513 91 Smo271457 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase 0.865975224782646 92 Smo440512 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatA component 0.8641676384907611 93 Smo149035 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-hydroxy-3-methylbut-2-enyl diphosphate synthase 0.8639289559066619 94 Smo64169 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB1/NDF1 component 0.8628872315466783 95 Smo438810 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.OTP51 splicing factor 0.8623508733932742 96 Smo82002 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF152 transcript stability factor 0.8622547744743277 97 Smo269483 Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase 0.8620911245252925 98 Smo176144 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease 0.8618216397263734 99 Smo177195 RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor 0.861082852135488 100