Sequence Description Alias PCC hrr Smo426174 0.953920588244123 1 Smo271457 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase 0.9458748302315887 2 Smo155359 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.Fd-dependent glutamate synthase 0.9358083385864291 9 Smo271018 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS1 component 0.9306257778466416 4 Smo227735 Redox homeostasis.enzymatic reactive oxygen species scavengers.superoxide dismutase activities.copper/zinc superoxide dismutase 0.9209612540428339 5 Smo182694 Photosynthesis.calvin cycle.phosphoribulokinase 0.919702742148641 13 Smo107618 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease 0.9164296105093283 11 Smo60716 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Ts elongation factor 0.9152287263782088 18 Smo446143 COP1-interactive protein 1 OS=Arabidopsis thaliana 0.9120829581600352 9 Smo148692 Protein biosynthesis.organelle translation machineries.translation initiation.IF-2 initiation factor 0.9120151158599799 13 Smo233481 Protein biosynthesis.organelle translation machineries.translation elongation.EF-Tu elongation factor 0.9114534241583935 12 Smo79954 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).SOQ1 negative NPQ-regulator protein 0.9113207808780055 12 Smo174833 Photosynthesis.calvin cycle.fructose-1,6-bisphosphatase 0.9103981002367457 13 Smo55147 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.divinyl chlorophyllide-a 8-vinyl-reductase 0.9092915799777671 14 Smo31438 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.9080359749343935 15 Smo272095 Photosynthesis.photorespiration.glycine cleavage system.T-protein aminomethyltransferase component 0.9070085579874926 16 Smo232430 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase 0.9035113897850446 17 Smo170624 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component 0.902803150200781 18 Smo82002 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.HCF152 transcript stability factor 0.8995066323124159 19 Smo90536 Protein modification.S-glutathionylation and deglutathionylation.glutathione S-transferase activities.class lambda 0.8985916031106982 37 Smo423707 0.8981856188178131 44 Smo448328 Photosynthesis.photophosphorylation.pseudo-cyclic electron flow.flavodiiron protein 0.8975498927900237 32 Smo403333 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana 0.8967909721200523 23 Smo107842 Probable GTP-binding protein OBGC1, chloroplastic OS=Oryza sativa subsp. indica 0.8965708358523503 24 Smo93150 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase 0.8958451525478391 25 Smo270825 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase 0.8955275657509095 26 Smo272235 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO 0.8943060039598685 27 Smo63559 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana 0.8933198242263789 43 Smo63596 Pentatricopeptide repeat-containing protein At3g29290 OS=Arabidopsis thaliana 0.8931106837293071 29 Smo169553 0.8930741252509767 30 Smo166238 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA3 protein 0.8915161042897976 38 Smo10032 Protein TSS OS=Arabidopsis thaliana 0.8913357329536 32 Smo79425 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.ATP-dependent activase 0.8900687127501455 40 Smo62145 Solute transport.carrier-mediated transport.MFS superfamily.FPN iron-regulated metal cation transporter 0.8892474562615318 34 Smo93539 Solute transport.carrier-mediated transport.APC superfamily.NCS-1 family.nucleobase cation transporter (PLUTO-type) 0.8881080907331013 35 Smo448162 PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana 0.8868490879912087 40 Smo130316 Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana 0.884151078035947 37 Smo440512 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatA component 0.8833708072314338 38 Smo51301 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) 0.8824992858626631 55 Smo440582 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana 0.8788568706478994 66 Smo143134 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL1 component 0.8787403764691404 54 Smo25109 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase 0.8760921480803495 42 Smo443172 Fruit protein pKIWI502 OS=Actinidia deliciosa 0.8751569426580391 43 Smo80855 Cytochrome P450 704B1 OS=Arabidopsis thaliana 0.8749599198885699 44 Smo235693 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF244 protein 0.8739766728701288 77 Smo80209 Cell wall.lignin.monolignol synthesis.caffeoyl-CoA 3-O-methyltransferase (CCoA-OMT) 0.8739206843417172 46 Smo10825 Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana 0.8707384048947185 47 Smo160384 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.8696003117104237 62 Smo92189 Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase 0.8687676227493125 49 Smo109632 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.ndhA-specific mRNA splicing factor 0.8686836492991268 50 Smo131328 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase 0.8685434228519947 51 Smo82221 Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana 0.8680600318625605 52 Smo404832 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC5 component 0.8673399570454216 53 Smo270508 0.8667279624955467 54 Smo117112 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor 0.8664083115836012 64 Smo423983 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll synthase ChlG 0.8652316788476754 61 Smo449377 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO 0.8649751037184186 57 Smo90782 Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana 0.8649537220860223 58 Smo97883 Lipid metabolism.lipid degradation.phospholipase activities.phospholipase A1 activities.PC-PLA1-type phospholipase A1 0.864541381335096 59 Smo173339 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein 0.8637043923654416 83 Smo442013 Pentatricopeptide repeat-containing protein At5g46580, chloroplastic OS=Arabidopsis thaliana 0.8615599809673067 61 Smo91144 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.HCF101 component 0.8612428912755636 75 Smo126152 Pentatricopeptide repeat-containing protein At1g09410, mitochondrial OS=Arabidopsis thaliana 0.8610890252574823 63 Smo64109 0.8599061423491177 64 Smo440495 Uncharacterized TPR repeat-containing protein At1g05150 OS=Arabidopsis thaliana 0.8593961344304911 65 Smo83230 Protein degradation.peptidase families.aspartic-type peptidase activities.pepsin-type protease 0.8581850255638539 66 Smo177791 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase 0.8578061095746197 67 Smo227615 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.HCF136 protein 0.8577957046149856 90 Smo73433 Protein modification.phosphorylation.CAMK kinase superfamily.CRK kinase 0.8577286759890855 69 Smo73428 Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit gamma 0.8577042017504527 70 Smo268187 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.DXS 1-deoxy-D-xylulose 5-phosphate synthase 0.8570827871207526 92 Smo429956 0.8570384658139278 77 Smo438768 GDSL esterase/lipase At5g03810 OS=Arabidopsis thaliana 0.8568327631312119 73 Smo417198 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.CIN phosphatase 0.8567982302959797 74 Smo417577 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase 0.8560779451989365 95 Smo85667 Solute transport.carrier-mediated transport.PLGG1 glycerate:glycolate transporter 0.8558123499374917 76 Smo136561 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana 0.8552587760985298 77 Smo228849 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease 0.8535990353052633 79 Smo141857 Protein biosynthesis.organelle translation machineries.translation termination.PrfA-type peptide chain release factor 0.8535088549569189 80 Smo120985 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen(50.1.13 : 371.7) & Abscisic acid 8-hydroxylase 4 OS=Arabidopsis thaliana 0.8531215615370848 81 Smo169778 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase 0.8518297360337888 82 Smo105931 Heparanase-like protein 3 OS=Arabidopsis thaliana 0.8507562459046881 83 Smo82264 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.protoporphyrinogen IX oxidase 0.8502184974004386 85 Smo173368 Solute transport.carrier-mediated transport.APC superfamily.NRAMP metal cation transporter 0.8501199091480327 86 Smo270406 Nucleotide metabolism.purines.phosphotransfers.adenylate kinase 0.8489372414440082 88 Smo437448 Cell wall.cutin and suberin.cuticular lipid formation.alkane-forming pathway.CER1-CER3 alkane-forming complex.CER3 aldehyde-generating component 0.8457476417415732 89 Smo413416 Probable transmembrane GTPase FZO-like, chloroplastic OS=Arabidopsis thaliana 0.8455621790543408 90 Smo81992 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor 0.8455326304564889 91 Smo166088 Photosynthesis.photophosphorylation.cytochrome b6/f complex.Rieske iron-sulfur component PetC 0.845216808866878 92 Smo149815 Photosynthesis.photophosphorylation.photosystem II.photoprotection.MPH1 protein 0.8442829230299295 93 Smo96850 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 0.8438210215584888 95 Smo101001 Solute transport.carrier-mediated transport.CLC anion channel / anion:proton antiporter 0.8437261723629428 96 Smo82367 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica 0.8434187902255478 97 Smo228435 Photosynthesis.calvin cycle.phosphopentose epimerase 0.8431892348867195 98 Smo420519 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.typical 2-Cys peroxiredoxin (2-CysPrx) 0.8427176675961127 99 Smo444108 Cytoskeleton.cp-actin-dependent plastid movement.PMIR cp-actin stability co-factor 0.8412902166585567 100