Sequence Description Alias PCC hrr Smo407119 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA3 component 0.9756599886714102 2 Smo180368 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor 0.9691693929336614 2 Smo405878 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL3 lysine-specific demethylase 0.9675934477122113 4 Smo444050 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor 0.9602542589939046 4 Smo86139 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC3 component 0.9571608239982127 5 Smo173562 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component 0.9570064897081382 7 Smo164675 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone 0.9504410098349482 11 Smo443962 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase 0.9451635784115475 10 Smo439148 0.9396290534062522 9 Smo150233 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF-QO electron transfer flavoprotein-ubiquinone oxidoreductase 0.9392809506464098 10 Smo438275 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.9385613111357394 11 Smo402861 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF2 component 0.936266626950107 13 Smo420594 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.9362428148672068 20 Smo443140 Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana 0.9356002112431933 32 Smo88336 0.9349457677519595 18 Smo60241 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor 0.9308290050546292 16 Smo177798 Cell wall.callose.callose synthase 0.9302738001572213 17 Smo440060 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.9295491557449168 18 Smo179234 Proteasome activator subunit 4 OS=Arabidopsis thaliana 0.9291651653405855 19 Smo186944 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1) 0.926892305955268 20 Smo409587 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component 0.9265922820275927 21 Smo90823 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED14 component 0.9257609925017338 38 Smo437689 Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica 0.9246226713853736 31 Smo170139 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana 0.9233066630039088 29 Smo148107 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 0.9222865420669808 25 Smo415636 0.9221204873426774 26 Smo177985 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor 0.9212856158639156 56 Smo426541 0.9208490701373211 28 Smo173767 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.920125477885913 37 Smo447032 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.919007925178437 30 Smo60640 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor 0.9173911143756486 58 Smo415212 0.9165645925312035 36 Smo115678 Protein translocation.peroxisome.importomer translocation system.receptor export system.Pex1-Pex6 subcomplex.Pex1 component 0.9145587033882049 33 Smo444132 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin 0.9144873355252662 70 Smo445658 Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana 0.9142366853441252 53 Smo442417 0.9137758223127636 72 Smo182327 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TWD40 component 0.9126933903143007 64 Smo442211 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase 0.910791541590253 40 Smo413675 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana 0.9099666677644962 39 Smo107448 BEACH domain-containing protein B OS=Arabidopsis thaliana 0.9098444797636187 40 Smo440923 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component 0.9093821857632522 41 Smo441216 Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA1 component 0.9092924037635686 42 Smo75107 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.9083093017910537 57 Smo440209 0.907671940384767 44 Smo90720 RNA biosynthesis.transcriptional activation.ARR-B transcription factor 0.9076665817339555 45 Smo416323 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP4 phosphatase complex.regulatory component (PSY2L) 0.906214853455568 46 Smo406046 0.9059555469346277 72 Smo406265 0.90584583950659 48 Smo173603 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component 0.9052087414185115 49 Smo437976 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.9051063740598223 50 Smo160385 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.large subunit 0.9042931296192461 51 Smo107792 0.9042056308063403 52 Smo439584 0.9038411928559299 53 Smo181800 0.9032724663056851 54 Smo74857 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT6.2 protease 0.9016469105800193 55 Smo439663 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP205 scaffold nucleoporin 0.9014261975118024 56 Smo90432 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.90038712232988 57 Smo410730 Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.9003180818097821 68 Smo230014 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.small subunit 0.8999552544954089 59 Smo440912 0.8992197677851765 60 Smo90560 DNA damage response.DNA repair polymerase activities.DNA polymerase eta (POLH) 0.8988323114888835 61 Smo85961 Protein translocation.chloroplast.inner envelope Sec2 post-import insertion system.SecA2 component 0.8986817409300627 62 Smo110201 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 1 0.8981805019123895 63 Smo444750 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.BRF1 component 0.8979915646136089 64 Smo407447 Nutrient uptake.copper uptake.reduction-based uptake.COPT Cu(+) transporter 0.8979883765635178 65 Smo234671 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF73/Ysh1 component 0.897943101687773 66 Smo439163 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein 0.8979295944777943 67 Smo440558 Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana 0.897390862394035 68 Smo182539 Vesicle trafficking.autophagosome formation.ATG1-13 autophagosome assembly control complex.ATG11 multifunctional scaffold component 0.8965724477106702 70 Smo115864 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component 0.8960463033808937 71 Smo437336 E3 ubiquitin-protein ligase listerin OS=Arabidopsis thaliana 0.8960031004854345 72 Smo407186 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.8954330009901157 74 Smo76216 Protein modification.phosphorylation.STE kinase superfamily.MAP3K-MEKK kinase 0.894517263464418 75 Smo440815 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.CHR5 component 0.8940647684973759 80 Smo447947 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component 0.8937435121457918 87 Smo414202 RNA biosynthesis.transcriptional activation.HUA2 transcription factor 0.8924013776503524 78 Smo55167 Vesicle trafficking.endomembrane trafficking.PI3-kinase vesicle nucleation complex I/II.TRAF1 ATG6-stability regulator protein 0.8922133630388063 87 Smo440325 0.8903697439664537 80 Smo96808 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).LIG6-type DNA ligase 0.8897766979543938 81 Smo80477 0.8896759174319727 82 Smo438226 0.8893076249979415 83 Smo440969 0.8890255297780056 84 Smo443317 Disease resistance response protein 206 OS=Pisum sativum 0.8888459404657653 85 Smo404798 Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase 0.8880214048852876 86 Smo438037 0.8875953447168268 87 Smo31929 Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana 0.8865091977652664 89 Smo422909 Inositol 1,3,4-trisphosphate 5/6-kinase 4 OS=Arabidopsis thaliana 0.8859981248931481 90 Smo230646 Protein root UVB sensitive 6 OS=Arabidopsis thaliana 0.8859939077900216 91 Smo411667 0.8842923503246619 93 Smo99725 0.8839131639484415 94 Smo405633 0.8836685882476962 95 Smo446942 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.8832873224776157 96 Smo115934 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI3 component 0.8831619451179313 97 Smo117268 Putative methyltransferase At1g22800, mitochondrial OS=Arabidopsis thaliana 0.882995334138257 98 Smo438614 0.88257010348047 99