Sequence Description Alias PCC hrr Smo442772 0.9364389273051338 1 Smo141188 0.935430038296667 2 Smo78506 0.935430038296667 3 Smo404623 COP1-interactive protein 1 OS=Arabidopsis thaliana 0.9305648154324393 5 Smo402256 0.917742371718532 5 Smo419947 0.9160653589528835 17 Smo107633 Cactin OS=Arabidopsis thaliana 0.9107348859259867 40 Smo174036 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC5 component 0.9086482201349083 46 Smo96727 RNA biosynthesis.RNA polymerase II-dependent transcription.SPT4/5 transcription elongation factor complex.SPT5 component 0.9069682882237645 19 Smo85327 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SR140 snRNP-associated protein 0.9059416760821636 35 Smo175555 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase 0.9043888595545196 70 Smo102852 0.9041441640056717 12 Smo440817 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.other.MED26 component 0.9035733752566353 13 Smo440877 Ubinuclein-2 OS=Arabidopsis thaliana 0.8991754782555268 41 Smo404271 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO maturation.OTS protease 0.8983542376050935 15 Smo404232 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.8974997847802588 58 Smo90375 WD40 repeat-containing protein HOS15 OS=Arabidopsis thaliana 0.8944486369589728 17 Smo402481 0.892877148408166 53 Smo437710 0.8914146223541956 83 Smo96986 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.8913058170768576 40 Smo31884 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).UV-damaged DNA-binding protein (UV-DDB) heterodimer.DDB2 component 0.890788724066495 21 Smo266749 0.8892773165090436 97 Smo410528 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.PININ component 0.8888012152774002 64 Smo166630 Protein degradation.peptidase families.serine-type peptidase activities.serine carboxypeptidase 0.8886067555680071 24 Smo429283 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-4 motor protein 0.887568144746464 63 Smo403074 0.8845079073409506 28 Smo147068 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.SSL2/XPB-type subunit 0.8828848380946042 34 Smo430219 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.EME1 component 0.8828147707083857 61 Smo411205 DDT domain-containing protein DDR4 OS=Arabidopsis thaliana 0.8813601351292064 54 Smo442865 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.ACINUS component 0.8812345059032832 32 Smo424802 Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana 0.8793874690200978 100 Smo412943 0.8792749845893114 53 Smo416934 Uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Arabidopsis thaliana 0.8776760473491217 35 Smo100916 RNA processing.RNA 5-end cap adding.mRNA capping enzyme 0.8771726713088878 37 Smo428406 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.EME1 component 0.8766367744700686 63 Smo438416 0.8763361337430856 39 Smo47017 Glutaminyl-peptide cyclotransferase OS=Arabidopsis thaliana 0.8739886723587014 70 Smo438304 0.873949795480562 41 Smo442381 DDRGK domain-containing protein 1 OS=Arabidopsis thaliana 0.8737721717139433 42 Smo113277 0.873429573776904 100 Smo449187 0.8729413073297937 44 Smo441010 0.872453046916379 45 Smo150191 RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.8721563616083567 46 Smo447027 Protein degradation.peptidase families.metallopeptidase activities.M16 families.Nardilysin-like peptidase 0.8718534482845052 47 Smo233533 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH mitochondrial protease complexes.FtsH3/10 matrix-AAA protease heterodimers.Fts3/10 component 0.8717951633924543 48 Smo426594 0.8704085147085723 50 Smo439571 Protein degradation.peptidase families.cysteine-type peptidase activities.SUMO-specific protease families.OTS protease 0.8700225781020876 53 Smo91404 0.8683508553228976 53 Smo173329 0.8676913220132421 54 Smo419047 0.8664098149733245 68 Smo419763 0.8663970137610253 56 Smo407736 0.865910662650929 58 Smo442877 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).DNA repair protein (RAD4) 0.8654007897456486 59 Smo405643 0.8651490886151423 66 Smo437404 0.8648846977658011 86 Smo268496 0.8635066894120014 99 Smo403914 0.8633661978453531 64 Smo442403 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SYF2 component 0.863198890008305 65 Smo122486 Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana 0.863188856379066 67 Smo93050 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana 0.8631575254478675 67 Smo413038 Peptidyl-prolyl cis-trans isomerase PASTICCINO1 OS=Arabidopsis thaliana 0.8629846835930453 69 Smo439153 0.8629273444650619 72 Smo228404 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.LSG1 GTPase assembly factor 0.8624348726460356 71 Smo437242 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.DRP3 dynamin-like protein 0.8621619864387342 78 Smo431867 0.8620264579835885 73 Smo154057 0.8601117461423962 77 Smo422020 0.8597745747619576 78 Smo102849 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor 0.8586799831374773 87 Smo443608 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.WAPL cohesin cofactor 0.8585281038818571 81 Smo156878 Cytoskeleton.microfilament network.actin polymerisation.fimbrin actin-crosslinking factor 0.85809056803625 82 Smo177444 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana 0.8577609088478951 91 Smo231973 Growth arrest-specific protein 8 homolog OS=Chlamydomonas reinhardtii 0.8575564575944801 84 Smo420794 DNA mismatch repair protein MSH3 OS=Arabidopsis thaliana 0.8567037363249675 86 Smo446684 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.VIP4/LEO1 component 0.8566547739649786 87 Smo409308 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.RPAP3 polymerase- II regulator protein 0.8564479791228169 91 Smo83918 Nucleotide metabolism.pyrimidines.catabolism.dihydopyrimidine aminohydrolase 0.8546090741012549 90 Smo166381 Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana 0.8531650852269591 94 Smo168828 La protein 1 OS=Arabidopsis thaliana 0.8531629848523179 95 Smo432445 0.8528863813838101 96 Smo402621 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40A pre-mRNA-processing protein 0.8512657412068082 97 Smo163608 UBP1-associated protein 2C OS=Arabidopsis thaliana 0.8508275410618814 98 Smo123773 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.SLP phosphatase 0.8505291536055547 99