Sequence Description Alias PCC hrr Smo159420 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.MET1 protein 0.944539806770605 3 Smo63565 Probable 2-carboxy-D-arabinitol-1-phosphatase OS=Arabidopsis thaliana 0.9397379327874551 4 Smo173134 Protein degradation.peptidase families.serine-type peptidase activities.SppA plastidial protease 0.9330033619670008 6 Smo149856 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 0.9310696340842204 5 Smo145611 Photosynthesis.photorespiration.aminotransferases.glutamate-glyoxylate transaminase 0.9273541823761419 12 Smo448423 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.MET1 protein 0.9221767313197551 6 Smo231708 Solute transport.channels.CorA family.MRS/MGT metal cation transporter 0.9215611558967975 7 Smo68006 Thioredoxin-like protein AAED1, chloroplastic OS=Arabidopsis thaliana 0.917051097890802 17 Smo271535 RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/DBB transcription factor 0.9169810982990282 9 Smo268623 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.ATP-dependent activase 0.9161881192264629 18 Smo445683 Nutrient uptake.copper uptake.reduction-based uptake.FRO metal ion-chelate reductase 0.9149300647346685 17 Smo83798 0.9147212167179665 18 Smo270698 Cellular respiration.glycolysis.plastidial glycolysis.fructose-1,6-bisphosphate aldolase 0.9128595004083719 28 Smo153563 Photosynthesis.photorespiration.glycine cleavage system.P-protein glycine dehydrogenase component 0.9126599391443445 17 Smo161485 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.transketolase 0.9105079686115154 31 Smo82367 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica 0.9062737880184187 16 Smo73819 Coenzyme metabolism.tetrapyrrol biosynthesis.heme synthesis and modification.ferrochelatase 0.9059007814692503 47 Smo21211 Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana 0.9050198667942702 35 Smo447004 Cytoskeleton.cp-actin-dependent plastid movement.KAC accessory motility factor 0.904193532959284 42 Smo109981 Solute transport.carrier-mediated transport.MFS superfamily.PHT4 phosphate transporter 0.9000201221777571 20 Smo184811 Carbohydrate metabolism.trehalose metabolism.trehalose-6-phosphate synthase 0.8999948206660631 29 Smo98534 External stimuli response.light.red/far red light.COP1-SPA light signal transduction ubiquitin E3 ligase complex.SPA regulator component 0.899386846752029 34 Smo6160 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.acireductone dioxygenase 0.8988785693872944 41 Smo272067 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.CCD carotenoid cleavage dioxygenase 0.8972971746285685 24 Smo144086 Phytohormones.abscisic acid.perception and signalling.membrane-localized receptors.ABAR chloroplast envelope-localized receptor 0.8966905332801358 25 Smo442777 RNA-binding protein BRN1 OS=Arabidopsis thaliana 0.8965769834946048 26 Smo438117 Cytoskeleton.cp-actin-dependent plastid movement.CHUP motility factor 0.8947192794376988 65 Smo139558 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8921912714348883 65 Smo96266 Uncharacterized protein At5g03900, chloroplastic OS=Arabidopsis thaliana 0.8882950633485014 29 Smo442642 0.8882024103778128 54 Smo428906 RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor 0.8881282725754301 31 Smo118025 0.8872003043482967 33 Smo440439 Multi-process regulation.circadian clock.evening element regulation.LNK transcriptional co-activator 0.8859310535403023 45 Smo231587 Lipid metabolism.fatty acid synthesis.stearoyl-ACP desaturase 0.8848650748164056 59 Smo437606 CDGSH iron-sulfur domain-containing protein NEET OS=Arabidopsis thaliana 0.8801386000787704 35 Smo139726 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH1/2/5/6/8 component 0.8793630359594161 36 Smo49062 0.8791168605492888 37 Smo50862 Probable NAD kinase 2, chloroplastic OS=Oryza sativa subsp. japonica 0.8766820732578312 38 Smo78366 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8744712986505702 39 Smo145812 Putative elongation factor TypA-like SVR3, chloroplastic OS=Arabidopsis thaliana 0.8735683407081464 40 Smo267662 Phytohormones.ethylene.perception and signal transduction.ETR/ERS-type receptor protein 0.8730691915606539 86 Smo443865 0.8713518032736188 42 Smo76749 Protein modification.phosphorylation.CMGC kinase superfamily.STN kinase 0.870546525460164 73 Smo149244 Solute transport.carrier-mediated transport.APC superfamily.HAK/KUP/KT potassium cation transporter 0.8704655456012673 44 Smo149815 Photosynthesis.photophosphorylation.photosystem II.photoprotection.MPH1 protein 0.86969842244739 45 Smo441670 0.8692821491915039 46 Smo112098 Protein modification.peptide maturation.plastid.CtpA carboxy-terminal processing peptidase 0.8676284402771686 47 Smo130490 Endoribonuclease YBEY, chloroplastic OS=Arabidopsis thaliana 0.8675425524775521 48 Smo172950 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-4 motor protein 0.8664257608693076 49 Smo79882 Probable protein phosphatase 2C 55 OS=Arabidopsis thaliana 0.8653826309428293 50 Smo270825 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase 0.8651427924995385 58 Smo73919 Pentatricopeptide repeat-containing protein At5g08510 OS=Arabidopsis thaliana 0.8644801058890106 69 Smo178716 Probable indole-3-pyruvate monooxygenase YUCCA5 OS=Arabidopsis thaliana 0.8634273659279846 53 Smo409247 Protein modification.phosphorylation.PEK kinase 0.8606414193911438 54 Smo143627 Protein biosynthesis.organelle translation machineries.translation elongation.EF-G elongation factor 0.8603941555949057 83 Smo442018 Bifunctional TH2 protein, mitochondrial OS=Arabidopsis thaliana 0.8598132544763967 56 Smo438203 Cytoskeleton.cp-actin-dependent plastid movement.CHUP motility factor 0.8597944404150811 94 Smo441093 0.8586442171475062 58 Smo178158 Enzyme classification.EC_1 oxidoreductases.EC_1.13 oxidoreductase acting on single donor with incorporation of molecular oxygen (oxygenase)(50.1.12 : 906.0) & Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana 0.8568457214580825 59 Smo91391 Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana 0.8560048187786143 69 Smo147096 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor 0.8556952559237723 89 Smo85643 Coenzyme metabolism.NAD/NADP biosynthesis.de-novo pathway.aspartate oxidase 0.8539651364627315 100 Smo96850 Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana 0.8532234325334953 63 Smo110708 Redox homeostasis.chloroplast redox homeostasis.F-type thioredoxin 0.8521399003727076 64 Smo126213 Uncharacterized calcium-binding protein At1g02270 OS=Arabidopsis thaliana 0.8520235927324921 76 Smo444108 Cytoskeleton.cp-actin-dependent plastid movement.PMIR cp-actin stability co-factor 0.8506732909520945 66 Smo439341 0.8489087093514731 67 Smo184750 Solute transport.carrier-mediated transport.APC superfamily.SulP family.sulfate transporter (SULTR-type) 0.8476931219776992 68 Smo111448 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 228.4) & Linamarin synthase 2 OS=Manihot esculenta 0.8449959914001303 87 Smo174630 Uncharacterized protein At4g15545 OS=Arabidopsis thaliana 0.8442480893984688 70 Smo413659 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.electron donor-binding subcomplex E.NdhS component 0.8440537890524127 71 Smo118803 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyllide a oxygenase 0.8439168903355784 84 Smo267533 Cellular respiration.glycolysis.plastidial glycolysis.phosphoglycerate kinase 0.843414607437491 74 Smo69252 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpS adaptor component 0.8397777807474227 75 Smo448933 0.839662182068778 76 Smo111464 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase(50.2.4 : 225.0) & 7-deoxyloganetin glucosyltransferase OS=Catharanthus roseus 0.8382689695013308 78 Smo171031 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamyl-tRNA reductase 0.8348210709466342 79 Smo442479 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.PRC2 histone methylation complex.associated protein factors.PRC2-VRN-interacting PHD protein (VIN3,VRN5) 0.833826174339209 80 Smo437663 0.8333101307119742 81 Smo111807 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 205.6) & Short-chain dehydrogenase/reductase 2b OS=Arabidopsis thaliana 0.8328541852653178 82 Smo444640 0.8319369799340985 83 Smo84467 0.8305713691692136 85 Smo101241 Carboxylesterase 1 OS=Actinidia eriantha 0.8302651398713299 86 Smo105991 Carbohydrate metabolism.trehalose metabolism.trehalose-6-phosphate phosphatase 0.82977669036863 87 Smo107618 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease 0.8291188426114126 88 Smo419371 0.8275120687605685 90 Smo141846 External stimuli response.light.red/far red light.COP1-SPA light signal transduction ubiquitin E3 ligase complex.COP1 component 0.8263214330102785 92 Smo266613 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase 0.8253828497139649 93 Smo228435 Photosynthesis.calvin cycle.phosphopentose epimerase 0.824233334392734 96 Smo233607 Carbohydrate metabolism.gluconeogenesis.cytosolic fructose-1,6-bisphosphatase 0.8234383576077843 98 Smo14944 Solute transport.channels.MIP family.Nodulin-26-like intrinsic protein (NIP-type) 0.8232401772132313 99 Smo439358 0.8230466983105955 100