Sequence Description Alias PCC hrr AMTR_s00153p00065050 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBA-activating E1 protein evm_27.TU.AmTr_v1.0_scaffold00153.31 0.9165760810477545 1 AMTR_s00114p00117470 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.DCP1 regulatory component evm_27.TU.AmTr_v1.0_scaffold00114.51 0.9097332703299885 5 AMTR_s00024p00250640 Putative AC transposase OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00024.334 0.907724956392946 3 AMTR_s00029p00021500 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.4 0.902813719569284 4 AMTR_s00024p00176520 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase evm_27.TU.AmTr_v1.0_scaffold00024.135 0.9013308568584233 5 AMTR_s00032p00053220 Phytohormones.ethylene.perception and signal transduction.ETR/ERS-type receptor protein evm_27.TU.AmTr_v1.0_scaffold00032.33 0.9011970758058481 6 AMTR_s00009p00232070 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase evm_27.TU.AmTr_v1.0_scaffold00009.185 0.8936155317439592 15 AMTR_s00087p00057840 evm_27.TU.AmTr_v1.0_scaffold00087.12 0.893408104227441 11 AMTR_s00031p00234160 Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein evm_27.TU.AmTr_v1.0_scaffold00031.112 0.8932461914874438 27 AMTR_s00066p00134410 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.129 0.8926035886264748 10 AMTR_s00002p00269760 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00002.558 0.8917832930807571 11 AMTR_s00021p00136760 Transcription factor GTE4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.92 0.8904094891363543 12 AMTR_s00099p00081960 Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.60 0.8893605363230707 13 AMTR_s00002p00253550 Protein modification.phosphorylation.CMGC kinase superfamily.SRPK kinase evm_27.TU.AmTr_v1.0_scaffold00002.376 0.8890301167849964 14 AMTR_s00066p00189030 F-box protein SKIP16 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.239 0.8883952121769829 15 AMTR_s00080p00104750 evm_27.TU.AmTr_v1.0_scaffold00080.39 0.8870643921486568 16 AMTR_s00050p00101210 Protein degradation.peptidase families.serine-type peptidase activities.serine carboxypeptidase evm_27.TU.AmTr_v1.0_scaffold00050.19 0.8869919100199464 17 AMTR_s00002p00262570 evm_27.TU.AmTr_v1.0_scaffold00002.462 0.8862348149352507 18 AMTR_s00072p00117380 Cell division control protein 48 homolog D OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.59 0.8862345719119497 20 AMTR_s00078p00155240 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor evm_27.TU.AmTr_v1.0_scaffold00078.136 0.8835495832274973 21 AMTR_s00010p00265700 RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.513 0.8825556863612278 22 AMTR_s00013p00198120 Vesicle trafficking.target membrane tethering.Exocyst complex.EXO70 component evm_27.TU.AmTr_v1.0_scaffold00013.132 0.8825102827014425 23 AMTR_s00012p00251030 Pumilio homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.251 0.882473919492385 25 AMTR_s00010p00259630 Probable methyltransferase PMT2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.426 0.8794493056149201 25 AMTR_s00019p00238830 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component evm_27.TU.AmTr_v1.0_scaffold00019.346 0.878330410045273 26 AMTR_s00027p00200690 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.69 0.8766559410154969 27 AMTR_s00163p00018060 Coenzyme metabolism.molybdenum cofactor synthesis.molybdenum ion insertion.bifunctional molybdopterin adenylyltransferase and molybdenumtransferase (CNX1) evm_27.TU.AmTr_v1.0_scaffold00163.5 0.8766161972306552 28 AMTR_s00059p00072490 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component evm_27.TU.AmTr_v1.0_scaffold00059.47 0.8764572789692463 40 AMTR_s00074p00152100 evm_27.TU.AmTr_v1.0_scaffold00074.67 0.8760692138034681 30 AMTR_s00004p00023800 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00004.8 0.8745602791358353 87 AMTR_s00033p00216190 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.DRP3 dynamin-like protein evm_27.TU.AmTr_v1.0_scaffold00033.191 0.8738034102849311 99 AMTR_s00103p00063820 Protein AUXIN RESPONSE 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00103.32 0.8735441450011635 33 AMTR_s00060p00089240 Protein degradation.ER-associated protein degradation (ERAD) machinery.HRD3 component evm_27.TU.AmTr_v1.0_scaffold00060.36 0.8708442303613723 35 AMTR_s00010p00228130 UBP1-associated protein 2A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.256 0.8696606290483653 36 AMTR_s00046p00153230 evm_27.TU.AmTr_v1.0_scaffold00046.81 0.8694638451463814 67 AMTR_s00002p00140630 Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.eIF4G component evm_27.TU.AmTr_v1.0_scaffold00002.103 0.8690225499554255 68 AMTR_s00059p00109810 Probable protein phosphatase 2C 55 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.86 0.8687476620528725 39 AMTR_s00019p00256050 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3c component evm_27.TU.AmTr_v1.0_scaffold00019.448 0.8667139096309704 69 AMTR_s00039p00086570 Secondary metabolism.nitrogen-containing secondary compounds.glucosinolates.glucosinolate synthesis.methylthioalkylmalate isomerase.large subunit evm_27.TU.AmTr_v1.0_scaffold00039.47 0.8661432742419259 42 AMTR_s00055p00061980 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) evm_27.TU.AmTr_v1.0_scaffold00055.23 0.8652518582463773 43 AMTR_s00049p00097260 Carbohydrate metabolism.oxidative pentose phosphate pathway.oxidative phase.glucose-6-phosphate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00049.68 0.8651034477056863 44 AMTR_s00101p00147880 Lipid metabolism.galactolipid and sulfolipid synthesis.digalactosyldiacylglycerol synthase evm_27.TU.AmTr_v1.0_scaffold00101.122 0.8647976172016949 45 AMTR_s00103p00106340 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00103.61 0.8643467544012483 55 AMTR_s00023p00210090 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.fungal elicitor response.PBL27/RLCK185 kinase evm_27.TU.AmTr_v1.0_scaffold00023.153 0.863721889831605 87 AMTR_s00019p00206980 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.246 0.8628320348313548 49 AMTR_s00018p00211530 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component evm_27.TU.AmTr_v1.0_scaffold00018.131 0.8627264357579036 50 AMTR_s00226p00023090 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED4 component evm_27.TU.AmTr_v1.0_scaffold00226.12 0.8627003287318349 51 AMTR_s00041p00134980 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.MTA component evm_27.TU.AmTr_v1.0_scaffold00041.95 0.8618742829849556 98 AMTR_s00004p00098480 evm_27.TU.AmTr_v1.0_scaffold00004.80 0.8599012467615229 53 AMTR_s00095p00126700 evm_27.TU.AmTr_v1.0_scaffold00095.83 0.8598985938473228 54 AMTR_s00142p00104490 evm_27.TU.AmTr_v1.0_scaffold00142.68 0.8597730332385448 55 AMTR_s00049p00198350 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VIII kinase evm_27.TU.AmTr_v1.0_scaffold00049.210 0.859617112956924 56 AMTR_s00001p00094700 Protein degradation.peptidase families.metallopeptidase activities.M48 families.STE24 zinc metalloprotease evm_27.TU.AmTr_v1.0_scaffold00001.65 0.8580447496930674 57 AMTR_s00149p00070960 MND1-interacting protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00149.50 0.8569833577614717 70 AMTR_s00053p00015490 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type) evm_27.TU.AmTr_v1.0_scaffold00053.2 0.8568043911067103 62 AMTR_s00023p00230220 DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.183 0.8567923804994863 65 AMTR_s00015p00209030 Solute transport.carrier-mediated transport.MC-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00015.56 0.8567820120971957 65 AMTR_s00029p00205680 DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00029.296 0.8564660592648715 66 AMTR_s00009p00258510 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.CUL1/CUL2 scaffold component evm_27.TU.AmTr_v1.0_scaffold00009.301 0.8564417059944844 67 AMTR_s00051p00079490 RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00051.29 0.8562078586477532 68 AMTR_s00049p00218010 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.253 0.8548941898012188 70 AMTR_s00133p00101570 DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.46 0.8545928870567221 71 AMTR_s00048p00075850 RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor evm_27.TU.AmTr_v1.0_scaffold00048.34 0.8536342762045451 99 AMTR_s00012p00261940 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF12 component evm_27.TU.AmTr_v1.0_scaffold00012.328 0.8536022549451188 73 AMTR_s00024p00181230 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00024.143 0.8534943284753264 84 AMTR_s00018p00068150 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M20 IAA-amino acid hydrolase evm_27.TU.AmTr_v1.0_scaffold00018.22 0.8533462807691543 75 AMTR_s00051p00106780 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase-activating protein (RAB-GAP) evm_27.TU.AmTr_v1.0_scaffold00051.42 0.853102669585219 76 AMTR_s00002p00243900 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor evm_27.TU.AmTr_v1.0_scaffold00002.320 0.8530778849579067 77 AMTR_s00060p00168860 Amino acid metabolism.biosynthesis.aspartate family.asparagine.glutamine-dependent asparagine synthetase evm_27.TU.AmTr_v1.0_scaffold00060.105 0.8530201518872301 78 AMTR_s00007p00182220 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component evm_27.TU.AmTr_v1.0_scaffold00007.146 0.8522921665692601 79 AMTR_s00001p00252660 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.ELF7/PAF1 component evm_27.TU.AmTr_v1.0_scaffold00001.325 0.8517161481265303 81 AMTR_s00032p00162420 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00032.135 0.8505992555186175 83 AMTR_s00111p00094320 Carbohydrate metabolism.sucrose metabolism.synthesis.cytosolic phosphoglucose isomerase evm_27.TU.AmTr_v1.0_scaffold00111.63 0.8505177333343008 84 AMTR_s00106p00011660 evm_27.TU.AmTr_v1.0_scaffold00106.2 0.8491555370033128 86 AMTR_s00065p00037640 evm_27.TU.AmTr_v1.0_scaffold00065.16 0.8488290564400913 87 AMTR_s00147p00043750 Protein translocation.nucleus.nucleocytoplasmic transport.importin alpha adaptor proteins evm_27.TU.AmTr_v1.0_scaffold00147.17 0.8488185499470079 88 AMTR_s00006p00268860 Nutrient uptake.copper uptake.regulation.KIN17 copper homeostasis co-regulator evm_27.TU.AmTr_v1.0_scaffold00006.320 0.8487769782732744 89 AMTR_s00049p00211440 Vesicle trafficking.autophagosome formation.cargo recruitment.NBR1 autophagic adapter protein evm_27.TU.AmTr_v1.0_scaffold00049.238 0.8486538399789108 90 AMTR_s00053p00191950 Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond evm_27.TU.AmTr_v1.0_scaffold00053.143 0.8485048848853862 91 AMTR_s00016p00199290 External stimuli response.biotic stress.pathogen-associated molecular pattern (PAMP).PTI (pattern-triggered immunity) network.bacterial elicitor response.BIK1 kinase evm_27.TU.AmTr_v1.0_scaffold00016.166 0.8483768237883293 92 AMTR_s00001p00271430 Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.488 0.8475382951929296 93 AMTR_s00025p00215680 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00025.292 0.8473067591657188 96 AMTR_s00147p00099160 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.methylthioribose-1-phosphate isomerase evm_27.TU.AmTr_v1.0_scaffold00147.57 0.8470227875208584 97 AMTR_s00003p00111200 Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.77 0.8469845124860939 98 AMTR_s00009p00252980 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-XII kinase evm_27.TU.AmTr_v1.0_scaffold00009.265 0.8468935721146049 99 AMTR_s00090p00071890 Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.VPS4-VTA1 ESCRT-disassembly complex.VTA1 regulator component evm_27.TU.AmTr_v1.0_scaffold00090.24 0.8461877095042195 100