Sequence Description Alias PCC hrr Smo90520 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.PYG7 protein 0.9451744066472479 1 Smo439600 ABC transporter F family member 5 OS=Arabidopsis thaliana 0.9411172713129292 3 Smo447828 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana 0.9267975927067047 5 Smo156007 Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecA1 component 0.924859905555176 4 Smo166751 0.9245480602543266 5 Smo165641 Uncharacterized aarF domain-containing protein kinase At5g05200, chloroplastic OS=Arabidopsis thaliana 0.9237436027884095 6 Smo85469 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) 0.9188055162965997 8 Smo91321 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.917231746055984 8 Smo413295 Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana 0.9137048027308802 9 Smo172681 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamate-tRNA ligase 0.9136345105347727 10 Smo83448 Protein biosynthesis.organelle translation machineries.translation termination.RRF ribosome recycling factor 0.9121906913122104 11 Smo47118 0.9116728854101894 12 Smo74924 0.9084070795490895 13 Smo119009 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase 0.9063543429704763 24 Smo170011 0.9061067667453423 15 Smo75698 GTPase ERA1, chloroplastic OS=Zea mays 0.9058393931889284 26 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.9054568448593702 17 Smo438881 Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana 0.903193788826658 18 Smo81276 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP54 component 0.9012396961618908 24 Smo146755 0.9005989613833502 20 Smo85565 0.899410226251128 21 Smo270181 0.89919345511315 22 Smo11301 DEAD-box ATP-dependent RNA helicase 22 OS=Oryza sativa subsp. japonica 0.8966169335589791 27 Smo79664 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8958620541095001 27 Smo118724 0.8947858949274583 29 Smo75404 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter 0.8930827440530987 26 Smo164801 Cell cycle.organelle machineries.DNA replication.DNA primase and helicase TWINKLE 0.8920739075789494 32 Smo270556 Uncharacterized oxidoreductase At1g06690, chloroplastic OS=Arabidopsis thaliana 0.8911486839932878 28 Smo67117 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpP1/3-6 proteolytic core component 0.8909712534254824 29 Smo428281 0.8888954190340722 30 Smo145597 Cytochrome P450 97B2, chloroplastic OS=Glycine max 0.8884656997147488 31 Smo99197 D-aminoacyl-tRNA deacylase OS=Arabidopsis thaliana 0.888387151092861 32 Smo33587 Carbohydrate metabolism.gluconeogenesis.pyruvate orthophosphate dikinase activity.regulatory pyruvate orthophosphate dikinase kinase 0.8870302327337374 33 Smo64370 Protein biosynthesis.organelle translation machineries.translation termination.PrfB-type peptide chain release factor 0.8857558716470519 34 Smo228849 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease 0.8846523264977397 35 Smo173467 Phytohormones.strigolactone.synthesis.DWARF27 biosynthesis protein 0.8819731415529 36 Smo143134 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL1 component 0.8818609985832011 50 Smo93752 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein 0.8814053901232786 43 Smo82310 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP 0.8811817815016566 39 Smo269565 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.red chlorophyll catabolite reductase (RCCR) 0.8808984939591393 40 Smo142751 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica 0.8802887594168743 41 Smo413766 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.bifunctional methylthioribulose-1-phosphate dehydratase and enolase-phosphatase 0.8801561556043328 42 Smo405094 Elongation factor G-2, chloroplastic OS=Glycine max 0.8782645326905294 43 Smo164683 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase 0.8773010828126147 44 Smo75120 Protein root UVB sensitive 5 OS=Arabidopsis thaliana 0.8764383193820313 45 Smo117159 RNA biosynthesis.organelle machineries.transcription.Sigma-type basal transcription factor 0.8761213808834504 46 Smo146971 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase 0.8760008779949607 47 Smo109632 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.ndhA-specific mRNA splicing factor 0.8753216096155938 48 Smo154280 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 0.874446209117564 67 Smo80789 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 158.0) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8741314319587467 50 Smo30598 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.8737948975030386 51 Smo77276 ATP-dependent DNA helicase At3g02060, chloroplastic OS=Arabidopsis thaliana 0.8735215490733927 52 Smo139232 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase 0.8727768844519468 53 Smo437473 0.8713935384374623 54 Smo417198 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.CIN phosphatase 0.8706708318979564 55 Smo174616 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 0.8694444673218163 67 Smo440582 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana 0.8682093584253446 91 Smo438805 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component 0.8673526249137957 67 Smo64169 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB1/NDF1 component 0.867214290523084 59 Smo77541 GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana 0.865426697308162 60 Smo126894 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) 0.8634125248422441 61 Smo148310 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpP2 proteolytic component 0.8625556819642058 62 Smo57444 Bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana 0.8600472840407786 63 Smo100790 Thiocyanate methyltransferase 1 OS=Brassica oleracea 0.8600317352804652 64 Smo428653 Redox homeostasis.chloroplast redox homeostasis.NADPH-dependent thioredoxin reductase 0.8587253926265351 65 Smo142036 Probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic OS=Arabidopsis thaliana 0.858662949235973 66 Smo66389 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGRL1-like component 0.857512345368222 67 Smo110000 Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8561925318441261 68 Smo65804 Protein TAB2 homolog, chloroplastic OS=Oryza sativa subsp. japonica 0.8559730491452034 69 Smo78010 Protein modification.protein folding and quality control.protein folding catalyst activities.TF nascent polypeptide chaperone 0.8557328763801476 71 Smo52692 Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana 0.8552685792672194 71 Smo165421 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase 0.8548620172611406 82 Smo424522 0.8548436100099748 73 Smo153292 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component 0.8547401597795132 74 Smo410877 0.8546405787939517 75 Smo164227 Putative nitric oxide synthase OS=Oryza sativa subsp. japonica 0.8544879993044464 76 Smo45172 RNA processing.RNA modification.pseudouridylation.RsuA-type rRNA pseudouridine synthase 0.8526004671006403 78 Smo440741 0.8501383096214147 81 Smo409724 0.8495107453980134 82 Smo418636 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC13 component 0.8489779740739907 83 Smo406852 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group(50.2.1 : 164.1) & Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic OS=Nicotiana tabacum 0.8482945289207616 99 Smo116848 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase 0.8470441040696627 85 Smo80171 Protein biosynthesis.organelle translation machineries.translation elongation.EF-P elongation factor 0.8469173755379747 86 Smo402255 Protein Iojap, chloroplastic OS=Arabidopsis thaliana 0.8457910450059727 87 Smo88014 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.5,10-methenyl-THF synthetase 0.84561472760685 88 Smo95494 0.8447614135929036 89 Smo25109 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase 0.8445930358052758 90 Smo403998 0.8437818318954584 91 Smo64073 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-D component 0.8429339533301243 92 Smo437676 Protein biosynthesis.aminoacyl-tRNA synthetase activities.isoleucine-tRNA ligase 0.8422556920373575 93 Smo94171 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase 0.8417073576680896 94 Smo441705 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.threonylcarbamoyl-AMP synthase 0.8409524284316503 95 Smo117255 DAR GTPase 3, chloroplastic OS=Arabidopsis thaliana 0.8406952582600531 96 Smo33876 Protein modification.peptide maturation.plastid.CtpA carboxy-terminal processing peptidase 0.840403450301148 98 Smo71251 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpP1/3-6 proteolytic core component 0.8401506700274105 99