Sequence Description Alias PCC hrr Smo70578 0.9590705865023429 1 Smo164675 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone 0.9521468027274935 9 Smo182327 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TWD40 component 0.9473854631984419 4 Smo173603 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component 0.9464222813830274 4 Smo173767 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.9455736965019074 11 Smo443140 Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana 0.9452890168497634 18 Smo441953 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component 0.9449484504445995 7 Smo110201 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 1 0.9449245748284938 8 Smo438275 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.9447493895518516 9 Smo438209 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) 0.9445029077163698 10 Smo440912 0.943222089133507 11 Smo406046 0.9430527960283108 12 Smo139482 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase 0.9412860283850687 13 Smo154179 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase 0.941275072832533 14 Smo180368 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor 0.9411211188418497 15 Smo405878 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL3 lysine-specific demethylase 0.9383005805759498 22 Smo170139 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana 0.9379955978021886 17 Smo447032 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.9378705175506513 18 Smo88336 0.9375628833567167 19 Smo404055 RNA biosynthesis.transcriptional activation.HUA2 transcription factor 0.9373099685527331 20 Smo167789 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH7/9 component 0.9372784622274083 21 Smo165973 DnaJ homolog subfamily C GRV2 OS=Arabidopsis thaliana 0.9371699338593396 22 Smo85532 0.9352982116516585 23 Smo407447 Nutrient uptake.copper uptake.reduction-based uptake.COPT Cu(+) transporter 0.9351888124879495 24 Smo437689 Zinc finger CCCH domain-containing protein 27 OS=Oryza sativa subsp. japonica 0.9347121021406211 25 Smo110655 Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana 0.934665606605349 26 Smo171199 Multi-process regulation.TOR signalling pathway.TORC complex.RAPTOR regulatory component 0.9342276085663569 27 Smo79007 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) 0.9338581167991818 28 Smo168303 Acylamino-acid-releasing enzyme 1 OS=Oryza sativa subsp. japonica 0.9338258997216509 29 Smo447924 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED13 component 0.933442294206148 30 Smo443682 Uncharacterized protein At4g19900 OS=Arabidopsis thaliana 0.9333286109584883 31 Smo173562 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component 0.9327110796145294 32 Smo177376 Short integuments 2, mitochondrial OS=Arabidopsis thaliana 0.9318315617155131 33 Smo414216 mRNA cap guanine-N7 methyltransferase 2 OS=Oryza sativa subsp. japonica 0.930391408265498 34 Smo407119 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA3 component 0.9295121009395374 35 Smo441216 Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA1 component 0.9294384110116809 36 Smo160385 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2AF pre-RNA splicing auxiliary factor complex.large subunit 0.9287849967787819 37 Smo440913 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2 adherin 0.9257609925017338 38 Smo443962 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase 0.9255773183388007 39 Smo440558 Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana 0.924668709942348 40 Smo88215 Protein modification.phosphorylation.atypical kinase families.PIKK kinase 0.9245641270011391 41 Smo447098 Solute transport.carrier-mediated transport.APC superfamily.NRAMP metal cation transporter 0.9242173960775523 42 Smo99756 Pentatricopeptide repeat-containing protein At2g39620 OS=Arabidopsis thaliana 0.9232976721767817 43 Smo90720 RNA biosynthesis.transcriptional activation.ARR-B transcription factor 0.9231164114193061 44 Smo413864 0.9229510418897421 45 Smo419083 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UPT6 assembly factor 0.9225997171584328 46 Smo415212 0.9224918521328974 47 Smo176627 Protein translocation.chloroplast.inner envelope Sec2 post-import insertion system.SecA2 component 0.9224626422563416 48 Smo79650 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase 0.922186359837957 49 Smo175932 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PPKL phosphatase 0.9217545186706413 50 Smo150233 Amino acid metabolism.degradation.branched-chain amino acid.acyl-CoA dehydrogenase oxidation.ETF-QO electron transfer flavoprotein-ubiquinone oxidoreductase 0.9213252839682461 51 Smo438708 Polyadenylate-binding protein-interacting protein 7 OS=Arabidopsis thaliana 0.921176401848935 52 Smo169728 RNA processing.RNA 3-end polyadenylation.poly(A) RNA polymerase 0.9209432967316409 53 Smo236021 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease 0.9208659920679024 54 Smo90432 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.920608128328389 55 Smo440052 0.9204982376747581 56 Smo86139 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC3 component 0.9198824539876234 57 Smo235391 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease 0.9194210144027746 58 Smo100054 RNA processing.RNA modification.uridylation.URT1 uridylyltransferase 0.9177491413572257 59 Smo410730 Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.9172907920637703 60 Smo266713 Solute transport.channels.MIP family.tonoplast intrinsic protein (TIP-type) 0.9172723520612288 61 Smo75952 Protein modification.phosphorylation.PEK kinase 0.9163248989873582 62 Smo60241 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor 0.9161515140763596 63 Smo428704 0.9161076282275505 64 Smo139717 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP98 nucleoporin 0.9156368795477363 65 Smo143427 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.9150011196567298 66 Smo144158 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Brr2 RNA helicase 0.9143089866287963 67 Smo424372 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis thaliana 0.9140836038830532 68 Smo440505 Multi-process regulation.circadian clock.TIC circadian clock regulator 0.913114128309532 69 Smo164111 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) 0.9130643623387057 70 Smo440463 Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana 0.9129228377482044 71 Smo443671 Brefeldin A-inhibited guanine nucleotide-exchange protein 5 OS=Arabidopsis thaliana 0.9126326345873883 72 Smo411667 0.9122387459340296 73 Smo404798 Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase 0.9121993741738779 74 Smo101367 0.9114491048859011 75 Smo182539 Vesicle trafficking.autophagosome formation.ATG1-13 autophagosome assembly control complex.ATG11 multifunctional scaffold component 0.9098364406147528 76 Smo439584 0.9096989164279727 77 Smo432361 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component 0.9094602501021594 78 Smo117217 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor 0.9091440903109795 79 Smo168492 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.R-loop removal.type-1A topoisomerase TOP3b 0.9083460810053835 80 Smo234671 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF73/Ysh1 component 0.9081771466717122 81 Smo440060 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.9080286212422247 82 Smo442417 0.9078605972732338 91 Smo129262 Multi-process regulation.Rop GTPase regulatory system.RopGEF guanine nucleotide exchange activities.DHR2-type exchange factor 0.9075605105948438 84 Smo175519 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB2 import karyopherin 0.9074281695363166 85 Smo93518 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO E3 ligase activities.SUMO E3 ligase (SIZ1) 0.9072746891123742 86 Smo90560 DNA damage response.DNA repair polymerase activities.DNA polymerase eta (POLH) 0.9072702507208071 87 Smo70673 RNA processing.RNA decay.exosome complex.associated co-factors.SOP1 RNA degradation surveillance factor 0.9072677018578931 88 Smo403529 0.9072154887223992 89 Smo441667 RNA biosynthesis.transcriptional activation.CAMTA transcription factor 0.9071349972547207 90 Smo420183 RNA biosynthesis.transcriptional activation.Trihelix transcription factor 0.9067083003549558 91 Smo449066 TITAN-like protein OS=Arabidopsis thaliana 0.9058284125049813 92 Smo102692 Vesicle trafficking.endomembrane trafficking.protein recycling.deubiquitination.BRO1 deubiquitinase recruiting protein 0.9055656067742288 93 Smo444050 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor 0.9053270100614592 94 Smo50132 DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana 0.9052222129154056 95 Smo442688 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component 0.9049565784433395 96 Smo443317 Disease resistance response protein 206 OS=Pisum sativum 0.9040972827544009 97 Smo115934 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI3 component 0.9036927957711488 98 Smo445658 Exosome complex exonuclease RRP44 homolog A OS=Arabidopsis thaliana 0.9034244854215415 99 Smo406265 0.9033214886403962 100