Sequence Description Alias PCC hrr Smo440740 Protein modification.peptide maturation.plastid.SPP stromal processing peptidase 0.9392070648641193 3 Smo410333 0.936457411913274 2 Smo89990 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana 0.9288878344816428 8 Smo428406 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.EME1 component 0.9168870316190585 13 Smo438910 0.9133816097758725 5 Smo166773 Probable inactive ATP-dependent zinc metalloprotease FTSHI 2, chloroplastic OS=Arabidopsis thaliana 0.9121210421526268 11 Smo419303 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase 0.9073412647997864 24 Smo109207 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase 0.9047203482529074 14 Smo91298 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VII/NDR kinase 0.9042220250852012 9 Smo446032 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.NDX transcription factor 0.9034891650961794 15 Smo99919 0.9026843932421208 11 Smo430784 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc75-III component 0.90084334216149 12 Smo409885 0.9000935231490712 15 Smo76814 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic56 component 0.8998816202220775 30 Smo430123 0.8995485998211745 15 Smo406615 0.8992821363944802 48 Smo440877 Ubinuclein-2 OS=Arabidopsis thaliana 0.8969738581946795 48 Smo413675 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana 0.8961663741962306 19 Smo84658 Chromatin organisation.histone modifications.histone acetylation.MYST-type histone acetyltransferase 0.8954309049841653 22 Smo164227 Putative nitric oxide synthase OS=Oryza sativa subsp. japonica 0.8952013639111683 20 Smo175555 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase 0.8946395429803471 99 Smo430219 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.EME1 component 0.8943777590646765 35 Smo442726 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M18 aspartyl aminopeptidase (DAP) 0.8941980621364948 26 Smo402481 0.8939245904227574 51 Smo437976 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.8938959470488822 53 Smo96986 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.8922921069354284 37 Smo106218 Carbohydrate metabolism.starch metabolism.degradation.hydrolysis and phosphorolysis.starch-debranching activities.isoamylase-type enzyme 0.8919866426857946 27 Smo407721 Translation factor GUF1 homolog, chloroplastic OS=Oryza sativa subsp. japonica 0.8918551545784505 28 Smo418519 0.8910671524049801 29 Smo271353 Coenzyme metabolism.NAD/NADP biosynthesis.de-novo pathway.quinolinate phosphoribosyl transferase 0.8907420267783311 34 Smo167519 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8895734996126882 31 Smo437721 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic40 component 0.8866249059516688 33 Smo442872 0.8862663339086582 34 Smo93752 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein 0.885591816671612 36 Smo71323 Peptidyl-tRNA hydrolase, chloroplastic OS=Arabidopsis thaliana 0.8852205310982354 36 Smo145659 0.8845184573566395 63 Smo439153 0.8834073956393341 38 Smo31884 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).UV-damaged DNA-binding protein (UV-DDB) heterodimer.DDB2 component 0.8816362207352594 39 Smo402234 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana 0.8809019083362588 40 Smo166557 Protein biosynthesis.translation initiation.eIF5B Met-tRNA positioning factor 0.8806991563594873 67 Smo79275 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor 0.8796507872925747 43 Smo444750 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.BRF1 component 0.8790122778991495 54 Smo81522 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH12 component 0.878486414800555 47 Smo153292 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpR non-proteolytic core component 0.8765425908361698 49 Smo102849 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor 0.8744815342307656 51 Smo75404 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter 0.8742747790634946 52 Smo228404 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.LSG1 GTPase assembly factor 0.8726895144180965 53 Smo106157 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana 0.871405691218962 80 Smo20706 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays 0.8711952820261321 74 Smo439642 0.8703530853281127 82 Smo437796 0.8700750056178863 88 Smo403334 DNA damage response.DNA repair polymerase activities.DNA polymerase kappa (POLK) 0.8694722819234361 60 Smo439163 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp100 protein 0.8680505252431484 61 Smo444048 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase VIP2 OS=Arabidopsis thaliana 0.8674622580327072 64 Smo146971 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase 0.8674384942358389 65 Smo88014 Coenzyme metabolism.tetrahydrofolate synthesis.tetrahydrofolate (THF) interconversions.5,10-methenyl-THF synthetase 0.8674042611464211 66 Smo177598 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.malonyl-CoA synthetase (mtMCS) 0.8667506870207236 68 Smo409804 ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana 0.8665616883748389 69 Smo403724 DEAD-box ATP-dependent RNA helicase 50 OS=Arabidopsis thaliana 0.8652790062060288 72 Smo414202 RNA biosynthesis.transcriptional activation.HUA2 transcription factor 0.8650781316107359 89 Smo416934 Uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Arabidopsis thaliana 0.8643561368760022 74 Smo118636 0.864146848472007 75 Smo91321 Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCD transporter 0.8633219389872092 76 Smo439468 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpX chaperone component 0.8626075256931639 77 Smo421634 0.8625851587863581 78 Smo442069 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP14 assembly factor 0.859603796346499 94 Smo12282 Chaperone protein dnaJ A7A, chloroplastic OS=Oryza sativa subsp. japonica 0.8593700053504973 82 Smo181271 Phosphoinositide phosphatase SAC7 OS=Arabidopsis thaliana 0.8587299314788898 90 Smo438647 Multi-process regulation.circadian clock.TOC1 evening oscillator component 0.8583013028099217 84 Smo402672 Ubinuclein-1 OS=Arabidopsis thaliana 0.8581912464650172 85 Smo103517 Phytohormones.gibberellin.synthesis.ent-kaurene oxidase 0.8563810540108193 88 Smo429777 0.8557451261270123 89 Smo26412 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana 0.855698150402774 100 Smo405767 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic OS=Arabidopsis thaliana 0.8555450783731278 91 Smo30598 Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana 0.8554390419535981 92 Smo82310 Cell cycle.organelle machineries.DNA replication.DNA polymerase POP 0.8545841344251862 93 Smo89324 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC-type) 0.85395383100607 95 Smo412574 RAP domain-containing protein, chloroplastic OS=Arabidopsis thaliana 0.8539304869842719 96 Smo166503 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase 0.8536183655656485 97 Smo163827 Beta-glucosidase 25 OS=Oryza sativa subsp. japonica 0.8535635684027216 98