Sequence Description Alias PCC hrr Smo19585 0.8997734526021657 1 Smo7957 0.8711400853678948 2 Smo97155 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF3 component 0.8383576512577674 17 Smo445796 0.8196719113776509 33 Smo82990 0.8166803061248641 8 Smo151406 Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana 0.8075494104926239 6 Smo36646 Multi-process regulation.circadian clock.evening element regulation.Evening complex (EC).LUX component 0.7934257105950772 7 Smo73068 0.7905242657919406 9 Smo37324 RNA biosynthesis.transcriptional activation.HSF (heat shock) transcription factor 0.7885940087343287 11 Smo7686 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.NC2 regulator complex.alpha component 0.7845580989499864 23 Smo419668 0.7842175863216454 43 Smo73732 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor 0.7821948660235829 23 Smo79699 RNA biosynthesis.transcriptional activation.SBP transcription factor 0.7820980285314681 29 Smo427374 0.7811655014859422 64 Smo8400 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.SCL28/30/33 splicing factor 0.7795047206743899 17 Smo77639 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor 0.7784143701981766 45 Smo28201 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DAWDLE pri-miRNA-DCL1 association factor 0.7782594368529054 19 Smo38409 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor 0.7729697419942092 39 Smo49859 RNA biosynthesis.transcriptional activation.SBP transcription factor 0.7721723750553077 52 Smo404539 0.7719990972304019 87 Smo404541 0.7719990972304019 87 Smo405626 0.7719699820289738 64 Smo28388 Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana 0.7704669000660036 74 Smo73189 COP1-interacting protein 7 OS=Arabidopsis thaliana 0.7694413865802873 81 Smo28310 RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor 0.7690051607534365 28 Smo85048 COP1-interacting protein 7 OS=Arabidopsis thaliana 0.7684610433505134 30 Smo71695 Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana 0.7622123538663124 33 Smo39325 La-related protein 1C OS=Arabidopsis thaliana 0.756055017467706 36 Smo49051 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component 0.7549995957427943 51 Smo123330 Monothiol glutaredoxin-S17 OS=Arabidopsis thaliana 0.7538023366573195 39 Smo98374 F-box protein SKIP14 OS=Arabidopsis thaliana 0.7526624234901367 44 Smo81834 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm4 component 0.7519516375849118 71 Smo9031 Histone acetyltransferase HAC1 OS=Arabidopsis thaliana 0.7510437158185003 44 Smo404259 0.7499994026531203 45 Smo72615 0.7497966538983477 46 Smo430656 0.7494968207696671 70 Smo7956 Protein modification.acetylation.NatB-type N-terminal acetylase complex.NAA25 auxiliary component 0.7494297591155237 48 Smo78396 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.PWR component 0.7480811032929124 49 Smo79245 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.PWR component 0.7480811032929124 50 Smo7263 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component 0.74693248880318 94 Smo103093 0.7451555669863184 52 Smo58662 RNA biosynthesis.transcriptional activation.NF-Y transcription factor complex.NF-YC component 0.7448225897397107 53 Smo59634 Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana 0.7416313764306957 84 Smo37511 Light-sensor Protein kinase OS=Ceratodon purpureus 0.7414843163035507 56 Smo432231 0.7406248620233531 59 Smo36641 Protein translocation.chloroplast.thylakoid membrane Tat translocation system.Hcf106 component 0.7383757517470753 62 Smo9015 Splicing factor-like protein 1 OS=Arabidopsis thaliana 0.7373472051550961 63 Smo403912 0.7371493744621593 64 Smo59284 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL27 component 0.7357774667641368 65 Smo84611 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.WOX transcription factor 0.7351094245822863 66 Smo5816 0.7323227957826239 77 Smo59591 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase 0.7313728846531274 69 Smo418985 0.7306361393691794 82 Smo28626 RNA biosynthesis.transcriptional activation.SBP transcription factor 0.7254157746114694 92 Smo7078 0.7252352773287446 82 Smo8697 Chromatin organisation.histone modifications.histone ubiquitination.PRC1 histone mono-ubiquitination complex.modification writer protein components.RING1-type modification writer component 0.724614111193188 79 Smo69566 RNA biosynthesis.transcriptional activation.C2C2 superfamily.GATA transcription factor 0.7240156229661338 80 Smo83906 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.classical PTP phosphatase 0.7239139405525681 81 Smo73854 Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana 0.7219718271435625 83 Smo6338 Clathrin interactor EPSIN 2 OS=Arabidopsis thaliana 0.7196471827946438 85 Smo74217 0.7172959573147751 87 Smo81057 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component 0.7172048887467146 88 Smo419157 0.7169316489747066 89 Smo6054 0.7154974814951554 91 Smo59604 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase 0.7148155392906205 96 Smo127798 0.7145628854276652 94 Smo59230 0.7132385096879119 99 Smo18112 Protein modification.peptide maturation.plastid.PLSP/TPP plastidic signal peptidase 0.7132261389798946 96 Smo7969 0.7118006894558623 98