Sequence Description Alias PCC hrr Smo144149 PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana 0.9585029418500298 1 Smo271184 0.9506252921331418 2 Smo96317 Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana 0.949531119695053 3 Smo25109 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase 0.920003579880824 4 Smo233658 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PSY phytoene synthase 0.912968172857798 5 Smo174737 Rhodanese-like domain-containing protein 14, chloroplastic OS=Arabidopsis thaliana 0.9087912385888084 10 Smo97903 Photosynthesis.photorespiration.glycerate kinase 0.9060635379455364 8 Smo174616 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-D component 0.9058415444731067 21 Smo440512 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glutamyl-tRNA-dependent amidotransferase complex.GatA component 0.9055263244441241 9 Smo131328 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase 0.9030870349916689 10 Smo122474 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb29 protein 0.9028851428128458 11 Smo166437 0.8931996873326451 12 Smo57383 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC16 component 0.8917314016439865 13 Smo143134 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL1 component 0.8900984183182429 41 Smo92189 Protein biosynthesis.aminoacyl-tRNA synthetase activities.tryptophan-tRNA ligase 0.8898328769188889 23 Smo104804 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCq component 0.8868944533280566 16 Smo67905 Probable plastid-lipid-associated protein 13, chloroplastic OS=Arabidopsis thaliana 0.8790188146359186 17 Smo95494 0.8771644587372878 18 Smo85675 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL29 component 0.8761347122144102 19 Smo134339 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.Viridiplantae-specific components.OEC23 component PsbP 0.8732802321271605 20 Smo404832 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC5 component 0.871817575903113 45 Smo185868 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease 0.8678113122602954 35 Smo33587 Carbohydrate metabolism.gluconeogenesis.pyruvate orthophosphate dikinase activity.regulatory pyruvate orthophosphate dikinase kinase 0.8673686470798367 23 Smo170290 Uncharacterized protein At5g02240 OS=Arabidopsis thaliana 0.8673114517974425 24 Smo123790 Pheophytinase, chloroplastic OS=Arabidopsis thaliana 0.8659239711290136 25 Smo98333 External stimuli response.drought.stomatal closure signalling.CAS calcium sensor 0.8652792022778386 45 Smo429956 0.8650151108276762 63 Smo405094 Elongation factor G-2, chloroplastic OS=Glycine max 0.8645049662765063 28 Smo411048 0.862002140685054 29 Smo106498 Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP3 protein 0.8619333221395876 30 Smo85565 0.8618772864514354 36 Smo95906 Carbonic anhydrase, chloroplastic OS=Pisum sativum 0.8613904417980225 32 Smo85247 Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana 0.8611070013111713 33 Smo229587 Prolycopene isomerase 1, chloroplastic OS=Oncidium hybrid cultivar 0.8593645430101584 40 Smo270406 Nucleotide metabolism.purines.phosphotransfers.adenylate kinase 0.8593221223684182 35 Smo117112 Photosynthesis.photophosphorylation.photosystem II.photosynthetic acclimation.APE acclimation factor 0.859208290101701 78 Smo183248 Coenzyme metabolism.tetrapyrrol biosynthesis.5-aminolevulinic acid formation.glutamate-1-semialdehyde-2,1-aminomutase 0.8557142747878883 37 Smo147927 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo dimer.small subunit 0.8556409091427464 41 Smo432611 Protein degradation.peptidase families.aspartic-type peptidase activities.pepsin-type protease 0.8550985439221493 39 Smo75294 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR1 0.8543937190102359 40 Smo130316 Protochlorophyllide-dependent translocon component 52, chloroplastic OS=Arabidopsis thaliana 0.8538925655072681 50 Smo230291 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL24 component 0.85367958996098 42 Smo438354 0.8533341893407574 43 Smo145597 Cytochrome P450 97B2, chloroplastic OS=Glycine max 0.851386197032422 44 Smo166751 0.8513595567836432 45 Smo69604 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst 0.8509204990989175 46 Smo164683 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen deaminase 0.8483775198563097 55 Smo413295 Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana 0.8468931347396972 48 Smo230423 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.CHL-I component 0.8450097150096451 49 Smo133157 RNA processing.organelle machineries.ribonuclease activities.CSP41 endoribonuclease 0.844973027011909 50 Smo117257 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase 0.8433497768298931 51 Smo64169 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB1/NDF1 component 0.842632668531568 89 Smo76801 Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana 0.8419416101911491 53 Smo421627 Lipid metabolism.lipid transport.plastidial lipid import.TGD5 lipid trafficking cofactor 0.8412252324398676 54 Smo421631 Lipid metabolism.lipid transport.plastidial lipid import.TGD5 lipid trafficking cofactor 0.8412252324398676 55 Smo82847 Nutrient uptake.iron uptake.iron storage.non-haem ferritin 0.8390037290698442 56 Smo438082 Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease 0.837359702378052 58 Smo75269 Uncharacterized protein At1g26090, chloroplastic OS=Arabidopsis thaliana 0.8356968285711093 61 Smo74055 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase 0.8352285623800346 62 Smo413620 0.8349086491788443 63 Smo6364 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL5 component 0.8346614558225631 64 Smo177791 Coenzyme metabolism.prenylquinone synthesis.ubiquinone synthesis.SPS1/2 solanesyl diphosphate synthase 0.8342889001483543 67 Smo64073 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.assembly phase.SUF-D component 0.8339750109305984 66 Smo142751 DEAD-box ATP-dependent RNA helicase 50 OS=Oryza sativa subsp. japonica 0.8321563211339934 68 Smo57444 Bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana 0.831435497271434 69 Smo71251 Protein degradation.peptidase families.serine-type peptidase activities.chloroplast Clp-type protease complex.ClpP1/3-6 proteolytic core component 0.8305175515823778 70 Smo403333 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana 0.8272843607504236 82 Smo403595 0.8256318411273047 74 Smo73752 0.8250389530641699 75 Smo438881 Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis thaliana 0.8246683916544426 85 Smo269565 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.red chlorophyll catabolite reductase (RCCR) 0.8239082499649801 77 Smo438240 Protein degradation.peptidase families.serine-type peptidase activities.Rhomboid protease 0.8232856630469917 78 Smo91229 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL31 component 0.8221162590777717 79 Smo447083 0.8192575590002518 81 Smo449377 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO 0.8187170354027344 83 Smo441909 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase 0.8155784060682597 85 Smo75361 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaF 0.8154344423301936 86 Smo441705 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.threonylcarbamoyl-AMP synthase 0.8145188605798626 87 Smo58583 0.8143224853337718 88 Smo406572 0.8137448876743949 89 Smo132845 Lipid metabolism.glycerolipid synthesis.phosphatidic acid.glycerol-3-phosphate acyltransferase 0.8129093490911453 90 Smo43111 DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana 0.811102109629427 93 Smo409882 0.8099159643802882 97 Smo270723 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpSRP43 component 0.8085752838817002 98 Smo126894 Redox homeostasis.hydrogen peroxide removal.ascorbate-glutathione cycle.ascorbate peroxidase (APX) 0.8081425711282667 100