Sequence Description Alias PCC hrr Smo266749 0.9450775111530136 11 Smo439648 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40C pre-mRNA-processing protein 0.9298514163261662 23 Smo404623 COP1-interactive protein 1 OS=Arabidopsis thaliana 0.9266040808664702 7 Smo79168 0.9238692369476502 36 Smo80512 RNA biosynthesis.RNA polymerase II-dependent transcription.miRNA biogenesis.DCL1-HYL1 miRNA biogenesis complex.TOUGH component 0.9237820926683227 18 Smo440320 Protein degradation.peptidase families.serine-type peptidase activities.mitochondrion Clp-type protease complex.ClpX chaperone component 0.922820319629791 9 Smo444132 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin 0.9219905561510963 53 Smo419947 0.9217255091965484 13 Smo441016 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.ELF7/PAF1 component 0.9177390174711633 54 Smo122486 Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana 0.9168652848693496 10 Smo402573 0.912824923714083 20 Smo424802 Chromatin modification-related protein EAF1 B OS=Arabidopsis thaliana 0.9123168535679974 45 Smo165735 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp28 RNA helicase 0.908369622301689 37 Smo437242 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.DRP3 dynamin-like protein 0.9076395563837379 14 Smo113277 0.9072856101576819 36 Smo406615 0.9071392457991491 34 Smo405818 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.RAD50 component 0.9070974192127746 17 Smo78845 0.9060002833113044 52 Smo440812 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).RBM25 pre-mRNA splicing regulator 0.9035188442016436 49 Smo437710 0.9022200439649051 59 Smo165786 0.9011318700767206 21 Smo175555 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase 0.9007997145635238 81 Smo429283 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-4 motor protein 0.9003684873344275 41 Smo446467 0.900075866742103 24 Smo102633 RNA processing.RNA modification.rRNA/tRNA methylation.TRM5 tRNA guanosine-methyltransferase 0.8998973951276741 25 Smo186368 Protein modification.protein folding and quality control.N-glycan-dependent machinery.UGGT UDP-glucose glycoprotein glucosyltransferase 0.899605294185764 85 Smo75107 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.8995581055385821 80 Smo404232 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.898947312556894 53 Smo438304 0.8975795436174447 30 Smo118926 RNA biosynthesis.transcriptional activation.E2F/DP transcription factor 0.8962741057794011 31 Smo98278 Protein DGS1, mitochondrial OS=Arabidopsis thaliana 0.8961207502522843 32 Smo174036 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC5 component 0.8959319936632321 75 Smo407204 0.8944692453459779 34 Smo439571 Protein degradation.peptidase families.cysteine-type peptidase activities.SUMO-specific protease families.OTS protease 0.8943416525346649 35 Smo440815 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.CHR5 component 0.8942217594369977 79 Smo20706 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays 0.8935522785835284 38 Smo441095 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.ATRX chromatin remodeling factor 0.8934094745167223 61 Smo441074 FIP1[V]-like protein OS=Arabidopsis thaliana 0.8927450222886363 55 Smo178863 DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana 0.8925157856158478 84 Smo126219 0.8920756131945796 43 Smo402481 0.8910662782377662 61 Smo411205 DDT domain-containing protein DDR4 OS=Arabidopsis thaliana 0.8907537025089085 45 Smo437809 0.8900949183577062 46 Smo430219 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.EME1 component 0.8899535432323167 47 Smo96989 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC1/HPR1 component 0.8898567335395068 89 Smo446942 Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.8891883771787759 71 Smo82731 0.8891858253070953 50 Smo418782 0.8883096032494812 95 Smo177444 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic OS=Arabidopsis thaliana 0.8882061090310431 53 Smo85327 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SR140 snRNP-associated protein 0.887945648390414 66 Smo79603 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana 0.8873199812169519 62 Smo406091 RNA biosynthesis.transcriptional activation.TIFY transcription factor 0.8871756572200685 56 Smo118632 0.8856188043661695 60 Smo96986 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.8854346776077918 58 Smo447027 Protein degradation.peptidase families.metallopeptidase activities.M16 families.Nardilysin-like peptidase 0.8850558411630488 60 Smo145504 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase 0.8848619771171753 77 Smo412943 0.8845952012356812 62 Smo169846 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3A complex.SF3A3 component 0.8838968219499295 63 Smo405542 Coiled-coil domain-containing protein 65 homolog (Fragment) OS=Chlamydomonas reinhardtii 0.8825888632652034 66 Smo439455 0.8813760593170251 67 Smo409485 0.8810673458022201 69 Smo164119 Protein modification.phosphorylation.CAMK kinase superfamily.CDPK kinase 0.8810594626779028 70 Smo410528 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.PININ component 0.8801280035429064 86 Smo440817 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.other.MED26 component 0.8801093256844131 72 Smo424202 0.8800079143856706 73 Smo76216 Protein modification.phosphorylation.STE kinase superfamily.MAP3K-MEKK kinase 0.8776636793649668 74 Smo440209 0.8776273342636323 94 Smo76001 0.8769597164827073 76 Smo444750 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.BRF1 component 0.8761906446022226 78 Smo35546 High mobility group B protein 15 OS=Arabidopsis thaliana 0.8760674101984975 79 Smo102849 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor 0.8758802460210428 80 Smo437796 0.8757158028002884 81 Smo78287 Solute transport.primary active transport.P-type ATPase superfamily.P2 family.ACA P2B-type calcium cation-transporting ATPase 0.8746220368271986 83 Smo163635 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC1/Tau95 component 0.8734777436237877 84 Smo114128 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIe basal transcription factor complex.alpha subunit 0.8734476343975407 85 Smo136622 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.RAD50 component 0.8720487132828919 89 Smo168147 Enzyme classification.EC_5 isomerases.EC_5.4 intramolecular transferase(50.5.4 : 315.7) & Carboxyvinyl-carboxyphosphonate phosphorylmutase, chloroplastic OS=Arabidopsis thaliana 0.8719685911588204 90 Smo147068 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.SSL2/XPB-type subunit 0.8718985172455298 91 Smo442845 0.8715188535775703 94 Smo231973 Growth arrest-specific protein 8 homolog OS=Chlamydomonas reinhardtii 0.8700815230473706 95 Smo234951 Protein modification.phosphorylation.CAMK kinase superfamily.SNF1-related SnRK3 kinase 0.8697352989354326 96 Smo104898 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.DMI1/Pollux/Castor calcium cation channel 0.8692021811437836 97 Smo61619 Solute transport.channels.MSL mechanosensitive ion channel 0.8689877719269408 99 Smo45495 Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear lamina.CRWN lamin-like protein 0.868849574145204 100