Sequence Description Alias PCC hrr AMTR_s00031p00115090 evm_27.TU.AmTr_v1.0_scaffold00031.51 0.9420124164591477 3 AMTR_s00007p00267680 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp20 Hsp60-co-chaperone evm_27.TU.AmTr_v1.0_scaffold00007.383 0.916057620162375 2 AMTR_s00001p00178450 Protein modification.disulfide bond formation.chloroplast.thiol-disulfide oxidoreductase (LTO1) evm_27.TU.AmTr_v1.0_scaffold00001.171 0.9095150459312557 5 AMTR_s00066p00198600 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.VIPP protein evm_27.TU.AmTr_v1.0_scaffold00066.264 0.9046610767600808 39 AMTR_s00058p00188880 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00058.187 0.903036151305857 6 AMTR_s00029p00159160 Large ribosomal RNA subunit accumulation protein YCED homolog 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.190 0.89998650707524 9 AMTR_s00061p00061380 Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.36 0.8983269146771009 7 AMTR_s00033p00159870 Uncharacterized methyltransferase At2g41040, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.105 0.8936590884792978 12 AMTR_s00001p00048980 Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme evm_27.TU.AmTr_v1.0_scaffold00001.28 0.8916108054668155 13 AMTR_s00115p00062270 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.Y3IP1 protein evm_27.TU.AmTr_v1.0_scaffold00115.3 0.8897688730988194 17 AMTR_s00050p00111180 Carbohydrate metabolism.starch metabolism.degradation.dephosphorylation.SEX4-type phosphoglucan phosphatase evm_27.TU.AmTr_v1.0_scaffold00050.23 0.8895891356515181 34 AMTR_s00039p00234990 Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.224 0.8877934628158396 12 AMTR_s00059p00159100 Secondary metabolism.terpenoids.methylerythritol phosphate pathway.4-hydroxy-3-methylbut-2-enyl diphosphate reductase evm_27.TU.AmTr_v1.0_scaffold00059.146 0.8822769912959436 72 AMTR_s00032p00226710 Coenzyme metabolism.tetrapyrrol biosynthesis.protoporphyrin IX formation.coproporphyrinogen III oxidase activities.HemF oxygen-dependent coproporphyrinogen III oxidase evm_27.TU.AmTr_v1.0_scaffold00032.243 0.8751715553636826 47 AMTR_s00066p00057600 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.CIN phosphatase evm_27.TU.AmTr_v1.0_scaffold00066.32 0.8748825434737315 15 AMTR_s00048p00123660 Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.67 0.8691577692091886 18 AMTR_s00112p00137130 Solute transport.carrier-mediated transport.MFS superfamily.SP family.hexose transporter (SGB/GlcT-type) evm_27.TU.AmTr_v1.0_scaffold00112.35 0.868151292903773 52 AMTR_s00002p00233660 GTP-binding protein At3g49725, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.269 0.8680135895548632 79 AMTR_s00077p00122240 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00077.115 0.8675477385121362 20 AMTR_s00071p00117740 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.DnaK protein evm_27.TU.AmTr_v1.0_scaffold00071.92 0.8636101737287428 59 AMTR_s00160p00077470 evm_27.TU.AmTr_v1.0_scaffold00160.29 0.8606032307565366 67 AMTR_s00024p00078360 65-kDa microtubule-associated protein 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.38 0.8596429547089977 76 AMTR_s00007p00141970 Bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.93 0.8588967897200365 34 AMTR_s00040p00111170 Protein ORANGE-GREEN, chloroplastic OS=Cucumis melo evm_27.TU.AmTr_v1.0_scaffold00040.80 0.8560460588760151 37 AMTR_s00029p00107920 evm_27.TU.AmTr_v1.0_scaffold00029.111 0.8545736003104625 27 AMTR_s00078p00038790 evm_27.TU.AmTr_v1.0_scaffold00078.16 0.853612629530285 28 AMTR_s00109p00036750 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll(ide) interconversions.chlorophyll b reductase complex.NYC1 component evm_27.TU.AmTr_v1.0_scaffold00109.25 0.8526534287125758 29 AMTR_s00022p00059330 evm_27.TU.AmTr_v1.0_scaffold00022.37 0.8520959474390185 30 AMTR_s00062p00090380 Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS21 | mtRPS21 component evm_27.TU.AmTr_v1.0_scaffold00062.60 0.8517210410651854 50 AMTR_s00006p00259220 Coenzyme metabolism.tetrapyrrol biosynthesis.uroporphyrinogen III formation.porphobilinogen synthase evm_27.TU.AmTr_v1.0_scaffold00006.214 0.8515062078698428 89 AMTR_s00039p00129550 Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.82 0.8498184564649256 33 AMTR_s00032p00219990 Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana 0.8482309545675014 36 AMTR_s00029p00229910 evm_27.TU.AmTr_v1.0_scaffold00029.363 0.8480761480107072 37 AMTR_s00010p00025770 Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00010.11 0.846418040364416 38 AMTR_s00048p00138430 Solute transport.carrier-mediated transport.PLGG1 glycerate:glycolate transporter evm_27.TU.AmTr_v1.0_scaffold00048.86 0.843543765810896 77 AMTR_s00140p00074640 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.chlorophyll breakdown.pheophorbide a oxygenase (PAO) evm_27.TU.AmTr_v1.0_scaffold00140.32 0.840974927133327 45 AMTR_s00001p00133790 evm_27.TU.AmTr_v1.0_scaffold00001.111 0.8374773646374644 48 AMTR_s00104p00098970 evm_27.TU.AmTr_v1.0_scaffold00104.36 0.8349098942319164 92 AMTR_s00021p00245460 Protein TSS OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.265 0.8338756728975277 51 AMTR_s00003p00104860 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.NFU1/2/3 component evm_27.TU.AmTr_v1.0_scaffold00003.70 0.8335276881305502 52 AMTR_s00033p00236040 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate lyase evm_27.TU.AmTr_v1.0_scaffold00033.238 0.8319214403398817 54 AMTR_s00001p00174820 Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.166 0.8308808662758673 55 AMTR_s00025p00170170 Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.202 0.8283231770044467 90 AMTR_s00148p00072380 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris evm_27.TU.AmTr_v1.0_scaffold00148.47 0.8279411306835989 74 AMTR_s00045p00158000 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00045.174 0.8262868532787156 63 AMTR_s00044p00073410 Organelle RRM domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.46 0.820513050926698 79 AMTR_s00010p00267610 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.regulation.lysine N-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00010.540 0.8198225573671553 81 AMTR_s00062p00057610 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL6 component evm_27.TU.AmTr_v1.0_scaffold00062.31 0.8187297297930263 83 AMTR_s00009p00080200 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp60 protein evm_27.TU.AmTr_v1.0_scaffold00009.27 0.8175616483074364 86 AMTR_s00049p00153870 Enzyme classification.EC_1 oxidoreductases.EC_1.14 oxidoreductase acting on paired donor with incorporation or reduction of molecular oxygen evm_27.TU.AmTr_v1.0_scaffold00049.137 0.8172966910049456 87 AMTR_s00103p00064920 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase) evm_27.TU.AmTr_v1.0_scaffold00103.33 0.8172800566693886 88 AMTR_s00003p00152830 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase evm_27.TU.AmTr_v1.0_scaffold00003.126 0.8154801850532971 91 AMTR_s00109p00030850 evm_27.TU.AmTr_v1.0_scaffold00109.17 0.8151340770096479 92