Sequence Description Alias PCC hrr AMTR_s00004p00115360 DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.98 0.9679304453974481 1 AMTR_s00025p00188660 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.helicase (SEN1) evm_27.TU.AmTr_v1.0_scaffold00025.230 0.9551929429724028 3 AMTR_s00055p00041510 Histidine kinase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.12 0.953356801344691 7 AMTR_s00013p00056780 evm_27.TU.AmTr_v1.0_scaffold00013.20 0.9522414161643724 4 AMTR_s00074p00196560 Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00074.124 0.950225579419269 5 AMTR_s00056p00038090 RNA processing.ribonuclease activities.RNase Z endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00056.21 0.9485422794263493 6 AMTR_s00029p00206820 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI2 RNA helicase component evm_27.TU.AmTr_v1.0_scaffold00029.298 0.9469433533637173 8 AMTR_s00017p00192140 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00017.112 0.9462966231825255 12 AMTR_s00110p00154620 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.130 0.945006215951625 9 AMTR_s00009p00261910 Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.342 0.944869848135251 10 AMTR_s00110p00053630 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin loading.SCC2 adherin evm_27.TU.AmTr_v1.0_scaffold00110.24 0.9395153402641934 51 AMTR_s00009p00184050 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) evm_27.TU.AmTr_v1.0_scaffold00009.114 0.9371528520956374 13 AMTR_s00062p00213230 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana 0.9371460783048148 13 AMTR_s00059p00194330 evm_27.TU.AmTr_v1.0_scaffold00059.216 0.9369158080986106 59 AMTR_s00059p00193620 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase evm_27.TU.AmTr_v1.0_scaffold00059.214 0.936627285487845 26 AMTR_s00033p00224700 BEACH domain-containing protein B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.211 0.9362577687293111 30 AMTR_s00099p00147110 evm_27.TU.AmTr_v1.0_scaffold00099.133 0.9358932057601034 17 AMTR_s00025p00149970 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).LIG4-XRCC4 ligase complex.LIG4 DNA ligase component evm_27.TU.AmTr_v1.0_scaffold00025.169 0.9354737017811172 18 AMTR_s00061p00182640 RNA processing.organelle machineries.ribonuclease activities.RNase E endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00061.204 0.9353884653673399 19 AMTR_s00077p00115750 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00077.105 0.9353587993282146 41 AMTR_s00007p00088050 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component evm_27.TU.AmTr_v1.0_scaffold00007.52 0.9352812029966765 21 AMTR_s00063p00135060 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HOX-like transcription factor evm_27.TU.AmTr_v1.0_scaffold00063.31 0.9348523596228556 22 AMTR_s00042p00115230 DNA damage response.DNA repair mechanisms.photoreactivation.6-4-type photolyase (UVR3) evm_27.TU.AmTr_v1.0_scaffold00042.26 0.9348348089913625 23 AMTR_s00020p00234520 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00020.106 0.9341957817148274 24 AMTR_s00080p00074320 Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00080.23 0.9333598999321655 25 AMTR_s00085p00139780 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.MORC-type auxilary factor evm_27.TU.AmTr_v1.0_scaffold00085.89 0.9331534629762129 41 AMTR_s00138p00044110 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component evm_27.TU.AmTr_v1.0_scaffold00138.19 0.932432353345143 27 AMTR_s00004p00110090 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VI kinase families.LRR-VI-1 kinase evm_27.TU.AmTr_v1.0_scaffold00004.89 0.9317282420634395 29 AMTR_s00110p00037960 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SMARCAL1-like group.SMARCAL1 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00110.12 0.9315728242822695 99 AMTR_s00029p00113670 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component evm_27.TU.AmTr_v1.0_scaffold00029.124 0.9314728451243259 31 AMTR_s00033p00216940 Solute transport.carrier-mediated transport.DMT superfamily.CLT glutathione transporter evm_27.TU.AmTr_v1.0_scaffold00033.192 0.9314063680276109 32 AMTR_s00039p00148640 Cell cycle.cytokinesis.preprophase microtubule organization.CLASP microtubule orientation regulator evm_27.TU.AmTr_v1.0_scaffold00039.100 0.930973010561593 47 AMTR_s00085p00089520 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.PIE1 ATPase component evm_27.TU.AmTr_v1.0_scaffold00085.48 0.9308066442209669 34 AMTR_s00002p00271990 evm_27.TU.AmTr_v1.0_scaffold00002.653 0.9307462852255973 67 AMTR_s00019p00219410 evm_27.TU.AmTr_v1.0_scaffold00019.273 0.9306980332970302 36 AMTR_s00197p00040880 Pentatricopeptide repeat-containing protein At2g30780 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00197.21 0.9306116457086023 37 AMTR_s00002p00251730 Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.362 0.9302100270261235 44 AMTR_s00119p00132020 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class IV ARF-GAP protein evm_27.TU.AmTr_v1.0_scaffold00119.107 0.930007942506455 39 AMTR_s00028p00237040 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00028.124 0.9298397063868351 40 AMTR_s00022p00221290 Clustered mitochondria protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.278 0.929788220958948 41 AMTR_s00003p00263110 Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana 0.9293920197078109 42 AMTR_s00017p00239150 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00017.210 0.9290822530055366 43 AMTR_s00032p00063530 evm_27.TU.AmTr_v1.0_scaffold00032.40 0.9290426550379767 57 AMTR_s00020p00038010 Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00020.9 0.9281493965179645 83 AMTR_s00082p00059940 Protein RST1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00082.4 0.9279790181053084 46 AMTR_s00053p00190690 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00053.139 0.927865680519422 47 AMTR_s00049p00011400 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.2 0.9278067305384347 69 AMTR_s00142p00102260 Protein modification.acetylation.NatA-type N-terminal acetylase complex.NAA15 auxiliary component evm_27.TU.AmTr_v1.0_scaffold00142.67 0.927302271975532 96 AMTR_s00049p00191680 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).transmembrane ring.GP210 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00049.202 0.9271191585756062 50 AMTR_s00050p00215890 evm_27.TU.AmTr_v1.0_scaffold00050.82 0.9271176065636457 51 AMTR_s00173p00060580 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00173.16 0.9270119833104092 52 AMTR_s00038p00151410 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO7 export karyopherin evm_27.TU.AmTr_v1.0_scaffold00038.92 0.926706039824736 53 AMTR_s00058p00177950 evm_27.TU.AmTr_v1.0_scaffold00058.168 0.9262139540176209 83 AMTR_s00004p00267320 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component evm_27.TU.AmTr_v1.0_scaffold00004.268 0.9260265985964778 55 AMTR_s00048p00073770 evm_27.TU.AmTr_v1.0_scaffold00048.33 0.9260073863510349 56 AMTR_s00069p00066350 Protein unc-13 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.40 0.9252346528668752 57 AMTR_s00491p00000370 5-3 exoribonuclease 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00491.1 0.9248909108595367 58 AMTR_s00086p00165640 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00086.104 0.9248261582628676 61 AMTR_s00054p00159220 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-7 motor protein evm_27.TU.AmTr_v1.0_scaffold00054.57 0.9246187334961009 60 AMTR_s00022p00244130 Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.358 0.9237514861578107 61 AMTR_s00146p00080830 RNA biosynthesis.transcriptional activation.PHD finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00146.48 0.9235812752475417 92 AMTR_s00070p00097310 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.transsulfuration pathway.cystathionine beta-lyase evm_27.TU.AmTr_v1.0_scaffold00070.48 0.9225787128476242 63 AMTR_s00101p00142180 evm_27.TU.AmTr_v1.0_scaffold00101.118 0.9222409172994496 80 AMTR_s00017p00141460 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.DMI1/Pollux/Castor calcium cation channel evm_27.TU.AmTr_v1.0_scaffold00017.65 0.9221144202999201 65 AMTR_s00025p00031700 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.NDX transcription factor evm_27.TU.AmTr_v1.0_scaffold00025.12 0.9217864187731784 82 AMTR_s00154p00074010 evm_27.TU.AmTr_v1.0_scaffold00154.49 0.9215831086293996 79 AMTR_s00020p00246930 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol III catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00020.118 0.9211240669967291 68 AMTR_s00078p00169690 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00078.160 0.9209641062217293 69 AMTR_s00058p00120430 evm_27.TU.AmTr_v1.0_scaffold00058.82 0.9208001127639316 94 AMTR_s00004p00093740 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00004.76 0.920748289726013 71 AMTR_s00058p00101170 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00058.56 0.9205674034864395 72 AMTR_s00048p00132040 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.77 0.9201798139286644 73 AMTR_s00055p00196140 Putative DUF21 domain-containing protein At3g13070, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.133 0.9199091815323207 74 AMTR_s00056p00136660 Coenzyme metabolism.iron-sulfur cluster assembly machineries.cytosolic CIA system.transfer phase.MMS19 component evm_27.TU.AmTr_v1.0_scaffold00056.109 0.9196934581076784 75 AMTR_s00131p00071060 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase evm_27.TU.AmTr_v1.0_scaffold00131.42 0.9189499279053035 76 AMTR_s00033p00135980 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00033.71 0.9189200308323062 77 AMTR_s00059p00171720 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00059.168 0.9187512646984519 79 AMTR_s00074p00162130 Lipid metabolism.lipid A synthesis.LpxB lipid-A-disaccharide synthase evm_27.TU.AmTr_v1.0_scaffold00074.77 0.9184488942980207 80 AMTR_s00033p00026050 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) evm_27.TU.AmTr_v1.0_scaffold00033.11 0.918407291052296 81 AMTR_s00056p00185560 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.ECB2/VAC1 RNA editing factor 0.918404458284778 82 AMTR_s00106p00133350 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component evm_27.TU.AmTr_v1.0_scaffold00106.104 0.917518459957369 84 AMTR_s00068p00160530 evm_27.TU.AmTr_v1.0_scaffold00068.112 0.9173190002375095 85 AMTR_s00066p00154510 Chromatin organisation.histone chaperone activities.CAF1 histone chaperone complex.CAF1a/FAS1 component evm_27.TU.AmTr_v1.0_scaffold00066.157 0.9168489945073379 87 AMTR_s00033p00208970 Carbohydrate metabolism.starch metabolism.degradation.phosphorylation.GWD glucan, water dikinase evm_27.TU.AmTr_v1.0_scaffold00033.183 0.9163569205473356 88 AMTR_s00008p00268620 Cell cycle.mitosis and meiosis.sister chromatid separation.spindle assembly checkpoint machinery.RAD17 checkpoint protein evm_27.TU.AmTr_v1.0_scaffold00008.241 0.9162693532588422 89 AMTR_s00004p00140970 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.137 0.9161996266556341 90 AMTR_s00016p00133200 evm_27.TU.AmTr_v1.0_scaffold00016.91 0.9160843066232361 91 AMTR_s00003p00241010 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase evm_27.TU.AmTr_v1.0_scaffold00003.257 0.9158065507263119 92 AMTR_s00019p00238660 Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.342 0.9156685614200475 93 AMTR_s00224p00011500 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00224.3 0.9151726962136665 95 AMTR_s00099p00131860 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC4/Tau131 component evm_27.TU.AmTr_v1.0_scaffold00099.119 0.9149871340032121 98