Sequence Description Alias PCC hrr AMTR_s00091p00037050 Protein modification.phosphorylation.AGC kinase superfamily.MAST kinase evm_27.TU.AmTr_v1.0_scaffold00091.6 0.9342902180753274 3 AMTR_s00066p00174610 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component evm_27.TU.AmTr_v1.0_scaffold00066.206 0.9321003197679899 5 AMTR_s00135p00021060 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00135.4 0.9320241317709702 3 AMTR_s00009p00238900 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component evm_27.TU.AmTr_v1.0_scaffold00009.205 0.9286086825166244 4 AMTR_s00027p00222730 evm_27.TU.AmTr_v1.0_scaffold00027.93 0.9206614379168199 5 AMTR_s00077p00082680 RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-VAL transcription factor evm_27.TU.AmTr_v1.0_scaffold00077.66 0.9171003546712393 9 AMTR_s00122p00094620 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00122.38 0.9121234762906588 65 AMTR_s00037p00128200 evm_27.TU.AmTr_v1.0_scaffold00037.54 0.9085784103498712 15 AMTR_s00061p00084390 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component evm_27.TU.AmTr_v1.0_scaffold00061.60 0.9064601234295099 12 AMTR_s00010p00218150 evm_27.TU.AmTr_v1.0_scaffold00010.227 0.904248531617881 10 AMTR_s00053p00219090 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO chain-forming-ligase E4 enzyme (PIAL) evm_27.TU.AmTr_v1.0_scaffold00053.172 0.8989526237832962 25 AMTR_s00071p00188270 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF3 component evm_27.TU.AmTr_v1.0_scaffold00071.198 0.8981905707028852 12 AMTR_s00001p00252660 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.ELF7/PAF1 component evm_27.TU.AmTr_v1.0_scaffold00001.325 0.8959203046009866 13 AMTR_s00025p00204100 Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00025.262 0.8943329835512576 34 AMTR_s00002p00140630 Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.eIF4G component evm_27.TU.AmTr_v1.0_scaffold00002.103 0.8899626093777098 30 AMTR_s00062p00113470 DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00062.93 0.8899527776121376 98 AMTR_s00078p00055040 RNA biosynthesis.siRNA biogenesis.RDR6 ssRNA polymerase evm_27.TU.AmTr_v1.0_scaffold00078.28 0.8894804410849921 57 AMTR_s00065p00140150 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP4/PCN assembly factor evm_27.TU.AmTr_v1.0_scaffold00065.96 0.8893038124808489 23 AMTR_s00068p00188520 MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00068.151 0.8892324267825251 47 AMTR_s00044p00148910 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.EH component evm_27.TU.AmTr_v1.0_scaffold00044.153 0.887909342352335 25 AMTR_s00064p00173090 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SR140 snRNP-associated protein evm_27.TU.AmTr_v1.0_scaffold00064.75 0.8840448052671634 32 AMTR_s00175p00061780 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00175.34 0.8829311696489788 31 AMTR_s00002p00269760 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00002.558 0.8815282788758946 32 AMTR_s00016p00233120 Cell wall.sporopollenin.exine wall formation.NEF1 exine patterning factor evm_27.TU.AmTr_v1.0_scaffold00016.232 0.881289032246406 33 AMTR_s00071p00142490 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).UPF1 effector protein evm_27.TU.AmTr_v1.0_scaffold00071.128 0.8804073006875113 61 AMTR_s00111p00143180 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component evm_27.TU.AmTr_v1.0_scaffold00111.123 0.8801464206903448 63 AMTR_s00004p00150000 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.Efl1 elongation-factor-like regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00004.154 0.8801329788159524 38 AMTR_s00040p00228310 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP2A large alpha subunit evm_27.TU.AmTr_v1.0_scaffold00040.272 0.8794799999422382 87 AMTR_s00016p00160930 Vesicle trafficking.endomembrane trafficking.post-Golgi trafficking.SCD complex.SCD2 protein evm_27.TU.AmTr_v1.0_scaffold00016.117 0.8792390394247466 40 AMTR_s00012p00251030 Pumilio homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.251 0.8785128943592154 43 AMTR_s00005p00185670 RNA biosynthesis.transcriptional activation.Trihelix transcription factor evm_27.TU.AmTr_v1.0_scaffold00005.67 0.8783862669212895 45 AMTR_s00025p00248490 Cytoskeleton.microfilament network.actin polymerisation.villin actin-crosslinking factor evm_27.TU.AmTr_v1.0_scaffold00025.405 0.8778643544750439 78 AMTR_s00059p00072490 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component evm_27.TU.AmTr_v1.0_scaffold00059.47 0.8773791152112517 47 AMTR_s00148p00061600 Phytohormones.ethylene.perception and signal transduction.EIN2-type signal transducer evm_27.TU.AmTr_v1.0_scaffold00148.35 0.8772355276264187 48 AMTR_s00303p00010520 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00303.1 0.8764998556196216 56 AMTR_s00004p00023800 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00004.8 0.876388339732103 79 AMTR_s00010p00265700 RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.513 0.8725572667863546 55 AMTR_s00009p00228600 Protein modification.phosphorylation.STE kinase superfamily.MAP3K-MEKK kinase evm_27.TU.AmTr_v1.0_scaffold00009.178 0.8723553330592301 56 AMTR_s00056p00074670 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP35 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00056.54 0.8710558367609945 58 AMTR_s00175p00030950 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00175.7 0.8706992545325362 65 AMTR_s00032p00012280 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VII/NDR kinase evm_27.TU.AmTr_v1.0_scaffold00032.1 0.8706554652558749 60 AMTR_s00019p00206980 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.246 0.8702827626250602 61 AMTR_s00051p00079490 RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00051.29 0.8696996807378654 63 AMTR_s00179p00011640 evm_27.TU.AmTr_v1.0_scaffold00179.1 0.8692153319707383 64 AMTR_s00078p00181940 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase evm_27.TU.AmTr_v1.0_scaffold00078.179 0.8685346860412864 80 AMTR_s00041p00134980 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.MTA component evm_27.TU.AmTr_v1.0_scaffold00041.95 0.868349845446056 76 AMTR_s00072p00117380 Cell division control protein 48 homolog D OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.59 0.866472041736222 75 AMTR_s00133p00101570 DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.46 0.8660282795780444 77 AMTR_s02191p00008430 evm_27.TU.AmTr_v1.0_scaffold02191.1 0.8659111211125157 78 AMTR_s00002p00253550 Protein modification.phosphorylation.CMGC kinase superfamily.SRPK kinase evm_27.TU.AmTr_v1.0_scaffold00002.376 0.8652000937820981 81 AMTR_s00157p00058990 evm_27.TU.AmTr_v1.0_scaffold00157.24 0.8651379304569994 82 AMTR_s00024p00181230 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00024.143 0.8650872003102978 83 AMTR_s00002p00252610 Transcriptional repressor ILP1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.371 0.8635876383280913 86 AMTR_s00009p00216420 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00009.153 0.8633077930074077 89 AMTR_s00029p00103360 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40C pre-mRNA-processing protein evm_27.TU.AmTr_v1.0_scaffold00029.100 0.8629396372282111 90 AMTR_s00024p00180690 Splicing factor-like protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.141 0.8596049795077392 100