Sequence Description Alias PCC hrr GSVIVT01035878001 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.881816988008106 1 GSVIVT01033327001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 1 0.8656344487738565 22 GSVIVT01011619001 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component 0.8647805040100985 13 GSVIVT01032046001 Clustered mitochondria protein OS=Arabidopsis thaliana 0.8582245474001501 4 GSVIVT01000835001 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.MAC7 component 0.8550744748258997 16 GSVIVT01003914001 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component 0.8520419474585252 6 GSVIVT01010197001 0.850795002112305 7 GSVIVT01001899001 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.8498672929101295 9 GSVIVT01018331001 Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana 0.8464796008534383 9 GSVIVT01006448001 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.CPL1/2 phosphatase 0.8421397153300523 10 GSVIVT01032627001 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component 0.8398179988188282 11 GSVIVT01030051001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP133 scaffold nucleoporin 0.8389992088599626 64 GSVIVT01020162001 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.VIR regulatory component 0.8376705624365635 20 GSVIVT01026496001 Phosphatidylinositol 4-kinase beta 1 OS=Arabidopsis thaliana 0.8374018413024921 14 GSVIVT01014783001 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.VCS scaffold component 0.8369573581903026 15 GSVIVT01038520001 0.8335010053507076 16 GSVIVT01010035001 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor 0.8327833413589413 42 GSVIVT01020543001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 0.8315692713623682 18 GSVIVT01035731001 0.8305859030816508 27 GSVIVT01022139001 0.8291173218175739 20 GSVIVT01035592001 0.824974898586646 21 GSVIVT01019046001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component 0.8231637342817717 23 GSVIVT01024708001 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion.heavy chain 0.8228446394623679 51 GSVIVT01008805001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class II/ASH1 histone methyltransferase component 0.8219408364816799 24 GSVIVT01016742001 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO3/XPOT export karyopherin 0.8210727190620768 25 GSVIVT01030649001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component 0.8206361679527532 65 GSVIVT01004707001 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein 0.8196191305227635 33 GSVIVT01007917001 0.8184841530754582 46 GSVIVT01012117001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.817028326492533 29 GSVIVT01009302001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40A pre-mRNA-processing protein 0.8164370646877851 37 GSVIVT01003381001 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALA P4-type ATPase component 0.8152591125868336 38 GSVIVT01016344001 Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.8151107484370782 61 GSVIVT01007885001 0.8138780425204382 76 GSVIVT01012049001 RNA biosynthesis.transcriptional activation.HUA2 transcription factor 0.8138215690261326 35 GSVIVT01009695001 0.8133213397506784 83 GSVIVT01018154001 0.8127594265307071 37 GSVIVT01021009001 0.8123262389259588 38 GSVIVT01021587001 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP10-DET1 (CDD) subcomplex.DDB1 core adaptor component 0.8121044973052554 39 GSVIVT01009206001 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase 0.8099007720248284 40 GSVIVT01024104001 0.808494705717241 84 GSVIVT01037455001 RNA biosynthesis.transcriptional activation.FAR1 transcription factor 0.8070061802220672 42 GSVIVT01023222001 Enzyme classification.EC_6 ligases.EC_6.1 ligase forming carbon-oxygen bond(50.6.1 : 621.9) & Leucine--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana 0.8061439463430531 43 GSVIVT01034603001 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.8051033531201617 49 GSVIVT01033178001 COP1-interactive protein 1 OS=Arabidopsis thaliana 0.8050648306410454 45 GSVIVT01021122001 0.8050051833194378 46 GSVIVT01034254001 0.8049122072372514 100 GSVIVT01034601001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUP1/NUP136 nucleoporin 0.8042909715621299 48 GSVIVT01012532001 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.DRP3 dynamin-like protein 0.8040487657235379 49 GSVIVT01037437001 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase 0.8036542326923167 51 GSVIVT01013204001 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.8032255159100489 52 GSVIVT01035985001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SR140 snRNP-associated protein 0.8020224588441887 54 GSVIVT01018223001 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase 0.8014973043678698 62 GSVIVT01001441001 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec31 scaffolding component 0.8011613237612518 56 GSVIVT01023854001 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor 0.8002260694425967 57 GSVIVT01023517001 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor 0.7990957540388399 58 GSVIVT01010343001 Cell division control protein 48 homolog C OS=Arabidopsis thaliana 0.7974129386069653 61 GSVIVT01037632001 0.7974126919113451 62 GSVIVT01007703001 Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana 0.7973957748281879 67 GSVIVT01013109001 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.GBF-type ARF-GEF factor 0.7970809510264507 64 GSVIVT01012038001 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana 0.7963610381890959 65 GSVIVT01031413001 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP2A large alpha subunit 0.7962973240624938 66 GSVIVT01034370001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Ris1 chromatin remodeling factor 0.7929787712691342 69 GSVIVT01016980001 Coenzyme metabolism.iron-sulfur cluster assembly machineries.cytosolic CIA system.transfer phase.MMS19 component 0.7922948853589776 99 GSVIVT01033442001 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.CCR4 deadenylase component 0.7921317009771476 73 GSVIVT01015338001 Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein OS=Arabidopsis thaliana 0.7920120643741773 74 GSVIVT01023952001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.MINIYO regulator protein 0.7904128963328887 75 GSVIVT01031411001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.7901231964343393 76 GSVIVT01011100001 RNA biosynthesis.transcriptional activation.HUA2 transcription factor 0.7898213214473913 77 GSVIVT01008079001 0.7896160155469729 78 GSVIVT01029687001 0.789598800591087 79 GSVIVT01022250001 RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana 0.789575770250509 80 GSVIVT01022591001 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-III complex-specific components.TRS85 component 0.7886144437640185 82 GSVIVT01029563001 Solute transport.primary active transport.VHP PPase family.VHP2 proton-translocating pyrophosphatase 0.7873607481986342 83 GSVIVT01005756001 0.7821779495385387 88 GSVIVT01034169001 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) 0.7817735894066676 89 GSVIVT01025073001 0.780683921304247 91 GSVIVT01022289001 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TASH3 component 0.7805583794462134 92 GSVIVT01016885001 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B-type regulatory component 0.7805488536802996 93 GSVIVT01038738001 Potassium transporter 7 OS=Arabidopsis thaliana 0.7790894501836693 95 GSVIVT01025079001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol III catalytic subunits.subunit 1 0.7789882461489193 96 GSVIVT01030782001 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).DNA repair protein (RAD4) 0.7787110889447653 97 GSVIVT01031913001 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.7776576575834304 99