Sequence Description Alias PCC hrr AMTR_s00002p00065920 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.IBA57 component evm_27.TU.AmTr_v1.0_scaffold00002.29 0.8621644599534466 29 AMTR_s00187p00015520 evm_27.TU.AmTr_v1.0_scaffold00187.1 0.8587229968742285 15 AMTR_s00068p00205920 Phytohormones.brassinosteroid.perception and signal transduction.receptor complex.receptor kinase regulator protein (MSBP) evm_27.TU.AmTr_v1.0_scaffold00068.184 0.8456781568899718 52 AMTR_s00041p00201270 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00041.182 0.8429230975631157 22 AMTR_s00069p00167010 Protein degradation.peptide tagging.Ubiquitin-related-modifier (URM)-anchor addition.URM ubiquitin-fold protein evm_27.TU.AmTr_v1.0_scaffold00069.142 0.8414933255856636 5 AMTR_s00037p00237830 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00037.160 0.8368568134588253 64 AMTR_s00010p00258750 Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.418 0.8313366623871687 18 AMTR_s00044p00064950 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG12-ATG5 ATG8-PE-ligase E3 dimer.ATG5 component evm_27.TU.AmTr_v1.0_scaffold00044.36 0.8271784260989108 44 AMTR_s00025p00178360 evm_27.TU.AmTr_v1.0_scaffold00025.214 0.8252960024622455 20 AMTR_s00002p00265350 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 7 evm_27.TU.AmTr_v1.0_scaffold00002.496 0.8244640006337747 13 AMTR_s00016p00175490 Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.134 0.8240646579517541 17 AMTR_s00010p00178800 Cellular respiration.oxidative phosphorylation.cytochrome c oxidase complex.assembly.HCC/SCO1 component evm_27.TU.AmTr_v1.0_scaffold00010.145 0.8202731926407638 53 AMTR_s00111p00036140 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00111.18 0.8160295618698749 78 AMTR_s00143p00029240 evm_27.TU.AmTr_v1.0_scaffold00143.4 0.8140181620197401 80 AMTR_s00011p00235260 Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris evm_27.TU.AmTr_v1.0_scaffold00011.124 0.8122504764341545 21 AMTR_s00001p00257570 Protein modification.phosphorylation.IRE bifunctional protein kinase and mRNA endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00001.350 0.8108856160826178 23 AMTR_s00051p00118520 evm_27.TU.AmTr_v1.0_scaffold00051.46 0.8105871350700175 19 AMTR_s00022p00235920 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm7 component evm_27.TU.AmTr_v1.0_scaffold00022.326 0.8061292218356518 50 AMTR_s00037p00082560 Reactive Intermediate Deaminase A, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00037.29 0.8056172626696626 22 AMTR_s00110p00061160 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIf transcription factor complex.small subunit evm_27.TU.AmTr_v1.0_scaffold00110.27 0.8001220998310963 88 AMTR_s00037p00235640 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3b component evm_27.TU.AmTr_v1.0_scaffold00037.156 0.7999479995882423 34 AMTR_s00049p00131010 DEAD-box ATP-dependent RNA helicase 41 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00049.108 0.7990229158944722 46 AMTR_s00028p00084470 evm_27.TU.AmTr_v1.0_scaffold00028.22 0.7983809059136586 27 AMTR_s00002p00250530 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B1-type regulatory component evm_27.TU.AmTr_v1.0_scaffold00002.354 0.7962722693709904 95 AMTR_s00110p00036260 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.EDL component evm_27.TU.AmTr_v1.0_scaffold00110.10 0.7932378674479788 46 AMTR_s00010p00170700 evm_27.TU.AmTr_v1.0_scaffold00010.136 0.7899442277761314 82 AMTR_s00056p00094740 Phytohormones.gibberellin.synthesis.ent-kaurenoic acid oxidase evm_27.TU.AmTr_v1.0_scaffold00056.69 0.7891132225631772 34 AMTR_s00069p00071970 Protein translocation.chloroplast.thylakoid membrane SRP insertion system.cpFtsY component evm_27.TU.AmTr_v1.0_scaffold00069.43 0.7878738261070012 33 AMTR_s00041p00203840 Translocon-associated protein subunit alpha OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00041.187 0.7826479611190221 44 AMTR_s00146p00086180 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.NSR splicing regulator evm_27.TU.AmTr_v1.0_scaffold00146.52 0.7822134792763907 37 AMTR_s00025p00196500 Methyl-CpG-binding domain-containing protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00025.248 0.7799911781373101 61 AMTR_s00047p00072890 Protein modification.N-linked glycosylation.complex N-glycan maturation.GnT-II-type N-acetylglucosaminyltransferase evm_27.TU.AmTr_v1.0_scaffold00047.16 0.7754298170722334 63 AMTR_s00033p00241730 evm_27.TU.AmTr_v1.0_scaffold00033.260 0.7749830186724622 59 AMTR_s00066p00161620 External stimuli response.biotic stress.symbiont-associated response.symbiosis signalling pathway.DMI1/Pollux/Castor calcium cation channel evm_27.TU.AmTr_v1.0_scaffold00066.172 0.7742119106366634 78 AMTR_s00055p00152980 evm_27.TU.AmTr_v1.0_scaffold00055.69 0.7733749436196484 64 AMTR_s00053p00051430 evm_27.TU.AmTr_v1.0_scaffold00053.27 0.7731834174424433 48 AMTR_s00049p00146760 RNA processing.RNA 3-end polyadenylation.Cleavage Factor I (CF-Im) complex.CPFS6/CFIm68 component evm_27.TU.AmTr_v1.0_scaffold00049.127 0.771152737961609 48 AMTR_s00019p00237960 Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris evm_27.TU.AmTr_v1.0_scaffold00019.339 0.7687125553375006 73 AMTR_s00058p00045920 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.LPA2 protein evm_27.TU.AmTr_v1.0_scaffold00058.17 0.7684510167332512 50 AMTR_s00038p00202410 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE3 component evm_27.TU.AmTr_v1.0_scaffold00038.151 0.7681471923456893 70 AMTR_s00076p00102070 Putative pentatricopeptide repeat-containing protein At5g08490 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00076.28 0.7676680314168377 52 AMTR_s00106p00065610 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00106.41 0.7639924682723775 83 AMTR_s00015p00192230 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.salvage pathway.methylthioribose kinase evm_27.TU.AmTr_v1.0_scaffold00015.49 0.7627214260091082 56 AMTR_s00069p00134710 Amino acid metabolism.biosynthesis.shikimate family.phenylalanine and tyrosine.Tyr-sensitive arogenate dehydrogenase (ADH) evm_27.TU.AmTr_v1.0_scaffold00069.98 0.7616265415057305 58 AMTR_s00135p00092810 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.N-succinyl 5-aminoimidazole-4-carboxamide RN synthase evm_27.TU.AmTr_v1.0_scaffold00135.51 0.7615205624020733 70 AMTR_s00010p00227020 evm_27.TU.AmTr_v1.0_scaffold00010.254 0.7613760655499926 64 AMTR_s00004p00261790 Protein yippee-like At5g53940 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.257 0.7612445719078729 61 AMTR_s00002p00270380 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.OTP86 RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00002.581 0.7603609052418658 63 AMTR_s00010p00055380 Coenzyme metabolism.iron-sulfur cluster assembly machineries.cytosolic CIA system.assembly phase.TAH18 component evm_27.TU.AmTr_v1.0_scaffold00010.28 0.7598516520299986 64 AMTR_s00088p00156860 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-2 component evm_27.TU.AmTr_v1.0_scaffold00088.126 0.7595923912625686 65 AMTR_s00045p00196960 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade C phosphatase evm_27.TU.AmTr_v1.0_scaffold00045.253 0.7592666884342469 66 AMTR_s00056p00104010 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase evm_27.TU.AmTr_v1.0_scaffold00056.76 0.7575031299011551 83 AMTR_s00048p00097960 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN9 regulatory component evm_27.TU.AmTr_v1.0_scaffold00048.49 0.7572424113569342 72 AMTR_s00146p00039020 Cytoskeleton.cp-actin-dependent plastid movement.PMIR cp-actin stability co-factor evm_27.TU.AmTr_v1.0_scaffold00146.19 0.7542807262938435 73 AMTR_s00119p00084090 evm_27.TU.AmTr_v1.0_scaffold00119.60 0.7516838737663066 75 AMTR_s00016p00257910 evm_27.TU.AmTr_v1.0_scaffold00016.352 0.7443252782254736 79 AMTR_s00031p00170040 evm_27.TU.AmTr_v1.0_scaffold00031.78 0.7383630036208678 87 AMTR_s00029p00122290 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC1/HPR1 component evm_27.TU.AmTr_v1.0_scaffold00029.136 0.7375291466828828 90 AMTR_s00019p00249840 evm_27.TU.AmTr_v1.0_scaffold00019.404 0.7373804894746919 91 AMTR_s00029p00240750 High mobility group B protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.412 0.7359033048238699 93 AMTR_s00022p00198640 evm_27.TU.AmTr_v1.0_scaffold00022.229 0.7350790524920243 94 AMTR_s00166p00033330 Putative pentatricopeptide repeat-containing protein At5g37570 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00166.15 0.7295561164406943 99