Sequence Description Alias PCC hrr GSVIVT01028685001 Chromatin modification-related protein EAF1 A OS=Arabidopsis thaliana 0.8909043610981788 5 GSVIVT01007885001 0.8901104554513172 9 GSVIVT01017346001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component 0.8888768136509987 21 GSVIVT01030649001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component 0.8713436363620184 13 GSVIVT01033511001 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana 0.8655412086512749 36 GSVIVT01019359001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1) 0.8645806338553955 13 GSVIVT01000835001 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.MAC7 component 0.8638074278004342 12 GSVIVT01009695001 0.8608477485297309 17 GSVIVT01025470001 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease 0.8604678752005729 47 GSVIVT01033231001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor 0.8515878225858969 30 GSVIVT01019046001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component 0.8501251074967934 11 GSVIVT01026933001 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component 0.8488205928821847 25 GSVIVT01000922001 0.8466911269336103 15 GSVIVT01036698001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin 0.8466104290868511 50 GSVIVT01011619001 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component 0.8431503834841105 33 GSVIVT01007917001 0.8419816564988845 22 GSVIVT01001899001 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.8405765745992586 17 GSVIVT01038603001 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP2 component 0.8393243503054919 43 GSVIVT01020920001 0.83838899277622 41 GSVIVT01000234001 Solute transport.primary active transport.P-type ATPase superfamily.P5 family.MIA P5-type cation-transporting ATPase 0.8376705624365635 20 GSVIVT01012049001 RNA biosynthesis.transcriptional activation.HUA2 transcription factor 0.8356782457499518 21 GSVIVT01011100001 RNA biosynthesis.transcriptional activation.HUA2 transcription factor 0.8353694709540628 22 GSVIVT01026952001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor 0.834857815745884 34 GSVIVT01025465001 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED13 component 0.833117950993781 24 GSVIVT01024104001 0.8326503185167345 49 GSVIVT01010209001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40C pre-mRNA-processing protein 0.8324277634678735 92 GSVIVT01024708001 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion.heavy chain 0.8323066316320595 32 GSVIVT01033327001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 1 0.8295044747168812 81 GSVIVT01035014001 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.8288234605254304 33 GSVIVT01012117001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.8287634041153515 31 GSVIVT01009365001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF4 component 0.8277155020241599 32 GSVIVT01031879001 Protein modification.phosphorylation.atypical kinase families.PIKK kinase 0.8262280065980621 56 GSVIVT01014783001 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA decapping complex.VCS scaffold component 0.8230509302522662 35 GSVIVT01008805001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class II/ASH1 histone methyltransferase component 0.8224380502895055 36 GSVIVT01018154001 0.8216263938425652 37 GSVIVT01018783001 Protein modification.phosphorylation.atypical kinase families.PIKK kinase 0.8202637148805753 39 GSVIVT01010769001 DExH-box ATP-dependent RNA helicase DExH12 OS=Arabidopsis thaliana 0.8195296084155749 42 GSVIVT01030107001 Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana 0.8175548346242489 40 GSVIVT01031411001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.8160586758837157 42 GSVIVT01016794001 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.REA1 assembly factor (MDN1) 0.8146467656069961 43 GSVIVT01022300001 RNA processing.RNA decay.exosome complex.associated co-factors.Dis3/RRP44 exoribonuclease 0.8146108852595537 52 GSVIVT01029442001 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor 0.814604406271918 53 GSVIVT01009302001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40A pre-mRNA-processing protein 0.8137221093796816 46 GSVIVT01026496001 Phosphatidylinositol 4-kinase beta 1 OS=Arabidopsis thaliana 0.8121276908947644 47 GSVIVT01024418001 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO1 export karyopherin 0.8100337406945578 77 GSVIVT01011388001 RNA processing.RNA modification.rRNA/tRNA methylation.TRM7-TRM732/TRM734 tRNA cytidine/guanosine-methyltransferase complex.TRM732 component 0.8083967953518227 49 GSVIVT01010035001 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor 0.8058893134178475 80 GSVIVT01009834001 Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana 0.8056387090919809 53 GSVIVT01013976001 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP10 assembly factor 0.8034877709185508 99 GSVIVT01013627001 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS3 CORVET-specific component 0.8027487663297798 74 GSVIVT01022139001 0.8025231957895483 57 GSVIVT01035354001 0.8023575639048631 58 GSVIVT01013247001 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).UPF1 effector protein 0.8006898570351626 60 GSVIVT01007911001 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana 0.8006743550850878 61 GSVIVT01035878001 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana 0.7985857158172829 63 GSVIVT01008977001 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.ACINUS component 0.7980559122990654 64 GSVIVT01032923001 0.7973355835529 65 GSVIVT01018721001 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.7965413388747679 66 GSVIVT01007806001 0.7936674384054312 68 GSVIVT01019761001 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor 0.7926021388129117 89 GSVIVT01036918001 Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana 0.7918503536481728 70 GSVIVT01016353001 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component 0.7918082061493698 77 GSVIVT01006448001 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.CPL1/2 phosphatase 0.7913012007222539 72 GSVIVT01010842001 Flowering time control protein FPA OS=Arabidopsis thaliana 0.7911301192225146 73 GSVIVT01035592001 0.7898765951654264 74 GSVIVT01037437001 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase 0.789291232462261 76 GSVIVT01003381001 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALA P4-type ATPase component 0.7885082932420725 85 GSVIVT01007875001 DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana 0.7884238432891879 79 GSVIVT01025725001 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.787745503307569 80 GSVIVT01024062001 Protein translocation.chloroplast.outer envelope TOC translocation system.Toc90/Toc120/Toc132/Toc159 component 0.7857217520903441 82 GSVIVT01016889001 0.7836277932058687 88 GSVIVT01037231001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.7835924371503211 89 GSVIVT01023517001 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor 0.7823224549395944 92 GSVIVT01015815001 Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana 0.7809647965391108 93 GSVIVT01035813001 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.7775841618754771 94 GSVIVT01036378001 0.7775197949017195 95 GSVIVT01000874001 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.7773764283846977 97