Sequence Description Alias PCC hrr AMTR_s00061p00187310 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00061.212 0.9473780179776372 1 AMTR_s00072p00157670 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.PES component evm_27.TU.AmTr_v1.0_scaffold00072.97 0.9380440752582864 3 AMTR_s00027p00217440 evm_27.TU.AmTr_v1.0_scaffold00027.80 0.9225764224779972 11 AMTR_s00058p00127050 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00058.91 0.9222210920691979 7 AMTR_s00095p00023580 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.6 0.9196127083439224 5 AMTR_s00060p00174830 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component evm_27.TU.AmTr_v1.0_scaffold00060.112 0.9185595242761336 6 AMTR_s00061p00211510 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.OLI2 maturation factor evm_27.TU.AmTr_v1.0_scaffold00061.262 0.9150152460768414 7 AMTR_s00101p00134540 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp4 assembly factor evm_27.TU.AmTr_v1.0_scaffold00101.112 0.9144791532000608 13 AMTR_s00066p00162800 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL5 component evm_27.TU.AmTr_v1.0_scaffold00066.175 0.9112809517889677 10 AMTR_s00077p00035710 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS6 component evm_27.TU.AmTr_v1.0_scaffold00077.17 0.9081210991947495 10 AMTR_s00004p00079950 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT8 theta subunit evm_27.TU.AmTr_v1.0_scaffold00004.65 0.9080416412580646 32 AMTR_s00078p00100600 Solute transport.porins.VDAC voltage-gated anion channel evm_27.TU.AmTr_v1.0_scaffold00078.71 0.9070707355859815 20 AMTR_s00022p00215770 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.ITS1 rRNA removal.BRX1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00022.258 0.9062801963690721 13 AMTR_s00049p00209260 evm_27.TU.AmTr_v1.0_scaffold00049.231 0.9061822240599171 14 AMTR_s00069p00092600 Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.57 0.9037727202325072 15 AMTR_s00149p00026500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit evm_27.TU.AmTr_v1.0_scaffold00149.8 0.9033702774302903 37 AMTR_s00155p00078230 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Rrp9/YAO1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00155.51 0.9016147015376326 17 AMTR_s00071p00022960 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.Sdo1 maturation factor evm_27.TU.AmTr_v1.0_scaffold00071.10 0.8988740584399904 18 AMTR_s00113p00140210 RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase evm_27.TU.AmTr_v1.0_scaffold00113.32 0.8954046260600823 25 AMTR_s00006p00254180 RNA biosynthesis.organelle machineries.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP) evm_27.TU.AmTr_v1.0_scaffold00006.176 0.895301287517297 20 AMTR_s00067p00046000 Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.27 0.8930097701153366 21 AMTR_s00061p00213950 RNA processing.RNA modification.rRNA/tRNA methylation.TRM10 tRNA guanosine-methyltransferase evm_27.TU.AmTr_v1.0_scaffold00061.266 0.8926577800890638 22 AMTR_s00002p00269670 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL3 component evm_27.TU.AmTr_v1.0_scaffold00002.554 0.8921789167668195 23 AMTR_s00003p00149890 DNA damage response.DNA repair mechanisms.base excision repair (BER).flap structure-specific endonuclease (FEN1) evm_27.TU.AmTr_v1.0_scaffold00003.122 0.891086096185045 35 AMTR_s00010p00083470 Protein biosynthesis.aminoacyl-tRNA synthetase activities.asparagine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00010.46 0.8901860734096069 25 AMTR_s00095p00019470 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.6 0.8900946788384096 26 AMTR_s00095p00027730 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.8 0.8891429312638915 27 AMTR_s00103p00136100 evm_27.TU.AmTr_v1.0_scaffold00103.88 0.8841400314912714 28 AMTR_s00047p00140090 60S ribosomal protein L7a-1 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00047.62 0.8835393246228613 29 AMTR_s00096p00039880 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Mpp10 assembly factor evm_27.TU.AmTr_v1.0_scaffold00096.17 0.8833990138866663 44 AMTR_s00087p00135370 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3h component evm_27.TU.AmTr_v1.0_scaffold00087.43 0.8826824106377842 32 AMTR_s00048p00053570 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor evm_27.TU.AmTr_v1.0_scaffold00048.18 0.8826623525520536 32 AMTR_s00029p00111280 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL13 component evm_27.TU.AmTr_v1.0_scaffold00029.120 0.8817356472520835 33 AMTR_s00030p00185140 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NSA2 maturation factor evm_27.TU.AmTr_v1.0_scaffold00030.118 0.8812626385479523 34 AMTR_s00102p00062980 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3e component evm_27.TU.AmTr_v1.0_scaffold00102.29 0.8803478266487975 36 AMTR_s00019p00202640 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component evm_27.TU.AmTr_v1.0_scaffold00019.237 0.8801153786342913 37 AMTR_s00009p00218020 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop1/fibrillarin methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00009.155 0.8801135559613645 38 AMTR_s00130p00044920 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.A-class RAB GTPase evm_27.TU.AmTr_v1.0_scaffold00130.16 0.8801085361071033 39 AMTR_s00045p00160070 Protein modification.phosphorylation.TKL kinase superfamily.Extensin kinase evm_27.TU.AmTr_v1.0_scaffold00045.179 0.8780085718073932 62 AMTR_s00105p00023120 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL4 component evm_27.TU.AmTr_v1.0_scaffold00105.4 0.8779568144775804 41 AMTR_s00002p00247340 Chromatin organisation.histone chaperone activities.NAP-type histone chaperone evm_27.TU.AmTr_v1.0_scaffold00002.335 0.8777033114101979 42 AMTR_s00068p00183630 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.large subunit proteome.mtRPL21 component evm_27.TU.AmTr_v1.0_scaffold00068.143 0.8772030071593557 43 AMTR_s00095p00146440 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS27a component evm_27.TU.AmTr_v1.0_scaffold00095.113 0.8764769885006586 44 AMTR_s00030p00241220 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.NOG1 regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00030.211 0.876389850727646 45 AMTR_s00091p00096420 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC2-type golgin evm_27.TU.AmTr_v1.0_scaffold00091.36 0.8763683732062457 46 AMTR_s00129p00082230 DNA damage response.BRCC DNA-damage response complex.RAD51 component evm_27.TU.AmTr_v1.0_scaffold00129.59 0.8755729859502207 47 AMTR_s00002p00271660 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS3a component evm_27.TU.AmTr_v1.0_scaffold00002.635 0.8745031097631446 49 AMTR_s00057p00214920 evm_27.TU.AmTr_v1.0_scaffold00057.271 0.8733942700758616 51 AMTR_s00126p00067580 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP14 assembly factor evm_27.TU.AmTr_v1.0_scaffold00126.26 0.8721306879008087 52 AMTR_s00025p00180550 Protein translocation.mitochondrion.outer mitochondrion membrane SAM insertion system.Metaxin component evm_27.TU.AmTr_v1.0_scaffold00025.217 0.8709231692474074 60 AMTR_s00041p00068660 Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00041.38 0.8696778603562498 55 AMTR_s00039p00202100 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS5 component evm_27.TU.AmTr_v1.0_scaffold00039.167 0.8687788426102822 71 AMTR_s00020p00233960 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.BET3 component evm_27.TU.AmTr_v1.0_scaffold00020.105 0.868545907380202 64 AMTR_s00070p00137140 RNA processing.RNA modification.methylthiolation.tRNA methylthiotransferase evm_27.TU.AmTr_v1.0_scaffold00070.75 0.8681404808560317 61 AMTR_s00010p00163740 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component evm_27.TU.AmTr_v1.0_scaffold00010.126 0.8680297738073139 66 AMTR_s00007p00238780 Cell cycle.mitosis and meiosis.meiotic recombination.DNA strand exchange.RPA presynaptic filament assembly factor complex.RPA2 component evm_27.TU.AmTr_v1.0_scaffold00007.248 0.8678813091141974 61 AMTR_s00047p00229860 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3m component evm_27.TU.AmTr_v1.0_scaffold00047.196 0.8665630860581816 62 AMTR_s00002p00225030 DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.247 0.8664725046901586 63 AMTR_s00036p00219140 evm_27.TU.AmTr_v1.0_scaffold00036.153 0.8658227213238971 64 AMTR_s00010p00244300 U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.320 0.8644389749214627 67 AMTR_s00041p00081370 evm_27.TU.AmTr_v1.0_scaffold00041.48 0.864102250388999 68 AMTR_s00023p00202890 evm_27.TU.AmTr_v1.0_scaffold00023.143 0.8626275346220882 69 AMTR_s00343p00015240 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL18 component evm_27.TU.AmTr_v1.0_scaffold00343.5 0.8625089473560099 70 AMTR_s00066p00092960 Protein modification.phosphorylation.atypical kinase families.RIO kinase evm_27.TU.AmTr_v1.0_scaffold00066.74 0.8621087749875382 71 AMTR_s00058p00122560 Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.84 0.8620716121263932 72 AMTR_s00012p00132130 Ribosome production factor 2 homolog OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00012.68 0.8620546166652765 73 AMTR_s00153p00030600 evm_27.TU.AmTr_v1.0_scaffold00153.10 0.8619148699888761 74 AMTR_s00056p00107780 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL7 component evm_27.TU.AmTr_v1.0_scaffold00056.81 0.861590483252667 75 AMTR_s00009p00218530 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS9 component evm_27.TU.AmTr_v1.0_scaffold00009.156 0.8607745840998097 76 AMTR_s00078p00196190 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUP50 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00078.205 0.8607408793245168 77 AMTR_s00001p00252290 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.GDP1 maturation factor evm_27.TU.AmTr_v1.0_scaffold00001.324 0.8604317647863515 78 AMTR_s00019p00240430 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC9 component evm_27.TU.AmTr_v1.0_scaffold00019.351 0.8601165209161624 79 AMTR_s00082p00120830 Amino acid metabolism.biosynthesis.glutamate family.histidine.histidinol-phosphate phosphatase evm_27.TU.AmTr_v1.0_scaffold00082.25 0.8592468227605873 80 AMTR_s00046p00091860 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.NST nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00046.48 0.8591365931998397 81 AMTR_s00129p00037970 RNA biosynthesis.rRNA biogenesis.APUM23 factor evm_27.TU.AmTr_v1.0_scaffold00129.17 0.8584635013264638 82 AMTR_s00006p00260320 Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.221 0.8577551477105385 83 AMTR_s00091p00066640 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL19 component evm_27.TU.AmTr_v1.0_scaffold00091.17 0.8571376671462956 85 AMTR_s00001p00102800 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL18a component evm_27.TU.AmTr_v1.0_scaffold00001.69 0.8569911530688024 86 AMTR_s00037p00233460 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3m component evm_27.TU.AmTr_v1.0_scaffold00037.150 0.8569790978022923 87 AMTR_s00021p00193930 Coenzyme metabolism.iron-sulfur cluster assembly machineries.mitochondrial ISC system.assembly phase.adrenodoxin component evm_27.TU.AmTr_v1.0_scaffold00021.155 0.8553686674470572 91 AMTR_s00072p00080890 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL10 component evm_27.TU.AmTr_v1.0_scaffold00072.35 0.8553594425930311 92 AMTR_s00077p00121720 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3f component evm_27.TU.AmTr_v1.0_scaffold00077.114 0.8550486398020996 94 AMTR_s00059p00214550 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP58 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00059.254 0.8538505236342981 96 AMTR_s00019p00040900 evm_27.TU.AmTr_v1.0_scaffold00019.21 0.8533714571763218 97 AMTR_s00011p00246950 Cell division control protein 48 homolog D OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00011.147 0.851167409069311 100