Sequence Description Alias PCC hrr AMTR_s00033p00195130 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00033.156 0.9538817568294489 1 AMTR_s00002p00236530 CDK5RAP1-like protein OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.279 0.9523403643911805 2 AMTR_s00001p00253330 evm_27.TU.AmTr_v1.0_scaffold00001.328 0.9476569983109926 3 AMTR_s00066p00041260 Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.18 0.9393954084055768 18 AMTR_s00048p00132040 RAN GTPase-activating protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.77 0.9377827516198632 14 AMTR_s00015p00199070 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL/KDM1 lysine-specific demethylase evm_27.TU.AmTr_v1.0_scaffold00015.53 0.9348306451859292 6 AMTR_s00001p00173820 Pentatricopeptide repeat-containing protein At2g17033 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.164 0.9346531974153731 7 AMTR_s00057p00157250 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-14 motor protein evm_27.TU.AmTr_v1.0_scaffold00057.145 0.9345698596763249 8 AMTR_s00048p00073770 evm_27.TU.AmTr_v1.0_scaffold00048.33 0.9345125148637046 20 AMTR_s00005p00062400 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.PRDA1 FSD2-interacting factor evm_27.TU.AmTr_v1.0_scaffold00005.9 0.9342800773205462 10 AMTR_s00001p00220750 evm_27.TU.AmTr_v1.0_scaffold00001.229 0.9338622921793118 16 AMTR_s00025p00142780 Pentatricopeptide repeat-containing protein CRP1, chloroplastic OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00025.155 0.9337039225379815 17 AMTR_s00002p00251730 Pentatricopeptide repeat-containing protein At5g65560 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.362 0.9331672257515653 34 AMTR_s00007p00031450 evm_27.TU.AmTr_v1.0_scaffold00007.11 0.9331401461685398 14 AMTR_s00027p00142670 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00027.43 0.9330673462190676 15 AMTR_s00025p00188660 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.helicase (SEN1) evm_27.TU.AmTr_v1.0_scaffold00025.230 0.9306355358698507 39 AMTR_s00010p00259870 evm_27.TU.AmTr_v1.0_scaffold00010.430 0.9294846402760033 17 AMTR_s00029p00240470 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.410 0.9292483162109219 18 AMTR_s00008p00202090 RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00008.120 0.928824882571511 19 AMTR_s00066p00141740 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.acetolactate synthase complex.regulatory subunit evm_27.TU.AmTr_v1.0_scaffold00066.141 0.9279398527809962 20 AMTR_s00024p00237090 evm_27.TU.AmTr_v1.0_scaffold00024.265 0.9274279237690431 21 AMTR_s00068p00029180 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.ZDS zeta-carotene desaturase evm_27.TU.AmTr_v1.0_scaffold00068.6 0.9261737871980958 22 AMTR_s00068p00160530 evm_27.TU.AmTr_v1.0_scaffold00068.112 0.9257832752387556 31 AMTR_s00148p00069790 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-VIII kinase families.RLCK-VIII-sis kinase evm_27.TU.AmTr_v1.0_scaffold00148.43 0.9254572143198789 24 AMTR_s00131p00054800 evm_27.TU.AmTr_v1.0_scaffold00131.33 0.9252623180469823 25 AMTR_s00001p00080980 Amino acid metabolism.biosynthesis.glutamate family.histidine.ATP phosphoribosyl transferase evm_27.TU.AmTr_v1.0_scaffold00001.55 0.9248235326818807 26 AMTR_s00081p00136350 Protein biosynthesis.organelle translation machineries.peptide deformylation.PDF formylmethionine deformylase evm_27.TU.AmTr_v1.0_scaffold00081.52 0.9245210554943548 27 AMTR_s00048p00223180 Protein biosynthesis.aminoacyl-tRNA synthetase activities.serine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00048.210 0.924013343728144 28 AMTR_s00047p00218860 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.FLN2 regulatory factor evm_27.TU.AmTr_v1.0_scaffold00047.167 0.9239089821836048 29 AMTR_s00010p00251120 evm_27.TU.AmTr_v1.0_scaffold00010.357 0.9237462536175528 30 AMTR_s00106p00104330 Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group evm_27.TU.AmTr_v1.0_scaffold00106.74 0.9230927118996806 31 AMTR_s00065p00038950 evm_27.TU.AmTr_v1.0_scaffold00065.17 0.9229693921336726 32 AMTR_s00111p00138070 Protein biosynthesis.aminoacyl-tRNA synthetase activities.glycine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00111.118 0.921608159322753 44 AMTR_s00029p00193780 Fructokinase-like 1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.262 0.9208657891486222 35 AMTR_s00023p00012750 Solute transport.carrier-mediated transport.MOP superfamily.MATE family.metal-citrate complex transporter (FRD-type) evm_27.TU.AmTr_v1.0_scaffold00023.3 0.9206109302055429 36 AMTR_s00019p00219410 evm_27.TU.AmTr_v1.0_scaffold00019.273 0.9199258201011273 37 AMTR_s00136p00085920 Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00136.44 0.9193543675975493 38 AMTR_s00022p00251260 RNA processing.organelle machineries.RNA modification.tRNA thiolation.MnmA pathway.tRNA thiouridylase evm_27.TU.AmTr_v1.0_scaffold00022.388 0.918981670728404 41 AMTR_s00224p00011500 Pentatricopeptide repeat-containing protein MRL1, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00224.3 0.918945415265228 40 AMTR_s00009p00266540 Plant intracellular Ras-group-related LRR protein 6 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00009.396 0.9179845655862997 57 AMTR_s00182p00037730 Cell cycle.organelle machineries.organelle fission.plastid division.ARC6 FtsZ assembly regulator evm_27.TU.AmTr_v1.0_scaffold00182.17 0.9168414638249939 58 AMTR_s00096p00107320 Coenzyme metabolism.phylloquinone synthesis.1,4-dihydroxy-2-naphthoyl-CoA synthase evm_27.TU.AmTr_v1.0_scaffold00096.66 0.9168296983374493 44 AMTR_s00058p00101170 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00058.56 0.9158968902496398 45 AMTR_s00009p00264940 Choline transporter protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.378 0.9155820230431487 46 AMTR_s00089p00093330 Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00089.48 0.9150845069769231 47 AMTR_s00002p00262620 evm_27.TU.AmTr_v1.0_scaffold00002.463 0.9149958741475828 48 AMTR_s00040p00213060 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic100 component evm_27.TU.AmTr_v1.0_scaffold00040.228 0.9148724501100773 55 AMTR_s00002p00198580 Uncharacterized protein At4g17910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.186 0.9147483017296332 50 AMTR_s00005p00212300 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VI kinase families.LRR-VI-1 kinase evm_27.TU.AmTr_v1.0_scaffold00005.91 0.9141523327055807 51 AMTR_s00076p00181180 Protein PTST homolog 3, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00076.69 0.913552269071874 52 AMTR_s00041p00193510 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.KVAG phosphometabolite transporter evm_27.TU.AmTr_v1.0_scaffold00041.168 0.912537345726633 55 AMTR_s00032p00018130 Obg-like ATPase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.3 0.9124955261739612 56 AMTR_s00077p00167440 evm_27.TU.AmTr_v1.0_scaffold00077.179 0.9124811007136374 57 AMTR_s00033p00135980 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00033.71 0.9117357538383499 80 AMTR_s00029p00114850 evm_27.TU.AmTr_v1.0_scaffold00029.125 0.9116501995812466 59 AMTR_s00003p00263110 Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana 0.9115977936275088 60 AMTR_s00017p00132450 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic110 component evm_27.TU.AmTr_v1.0_scaffold00017.54 0.911460336898164 62 AMTR_s00041p00073060 Amino acid metabolism.biosynthesis.glutamate family.histidine.histidinol dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00041.43 0.9099780758652183 81 AMTR_s00008p00241920 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.90978787291235 66 AMTR_s00180p00043090 Amino acid metabolism.biosynthesis.glutamate family.histidine.histidinol-phosphate aminotransferase evm_27.TU.AmTr_v1.0_scaffold00180.22 0.9095474483044159 67 AMTR_s00050p00221590 Protein modification.peptide maturation.plastid.CtpA carboxy-terminal processing peptidase evm_27.TU.AmTr_v1.0_scaffold00050.87 0.9090684067518171 69 AMTR_s00175p00037000 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00175.11 0.9087962813991117 70 AMTR_s00004p00143390 Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00004.140 0.9087459479014817 71 AMTR_s00041p00037520 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF160/Yhh1 component evm_27.TU.AmTr_v1.0_scaffold00041.17 0.9083572689504477 78 AMTR_s00053p00158610 Coenzyme metabolism.tetrahydrofolate synthesis.folyl-polyglutamate synthetase evm_27.TU.AmTr_v1.0_scaffold00053.107 0.9080043178378167 73 AMTR_s00028p00245370 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.CFM2-type splicing factor evm_27.TU.AmTr_v1.0_scaffold00028.138 0.9073683237108695 74 AMTR_s00005p00266220 evm_27.TU.AmTr_v1.0_scaffold00005.229 0.9070440545642605 76 AMTR_s00031p00061040 Uncharacterized protein At5g03900, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00031.26 0.9069682213637751 77 AMTR_s00056p00185560 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.ECB2/VAC1 RNA editing factor 0.9062532947748729 78 AMTR_s00057p00193080 Protein biosynthesis.organelle translation machineries.translation termination.PrfA-type peptide chain release factor evm_27.TU.AmTr_v1.0_scaffold00057.217 0.9056730089237844 81 AMTR_s00077p00156540 Serotonin N-acetyltransferase 1, chloroplastic OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00077.160 0.9053349240125336 82 AMTR_s00022p00248380 Probable glucuronoxylan glucuronosyltransferase F8H OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.375 0.9052563784497196 83 AMTR_s00077p00182530 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.207 0.9051855638559848 84 AMTR_s00057p00151990 Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.138 0.9043407925640192 86 AMTR_s00002p00263670 evm_27.TU.AmTr_v1.0_scaffold00002.481 0.9040439635582496 89 AMTR_s00001p00269990 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT3 protease evm_27.TU.AmTr_v1.0_scaffold00001.453 0.9040265956589149 90 AMTR_s00038p00234220 Haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00038.234 0.9038716730591398 91 AMTR_s00016p00219550 evm_27.TU.AmTr_v1.0_scaffold00016.199 0.9027350576302465 93 AMTR_s00025p00237300 Protein translocation.chloroplast.inner envelope Sec2 post-import insertion system.SecY2 component evm_27.TU.AmTr_v1.0_scaffold00025.355 0.9013203544314272 97 AMTR_s00022p00098570 Solute transport.carrier-mediated transport.MC-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00022.81 0.9011823765971738 98 AMTR_s00049p00169350 Protein STICHEL-like 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.158 0.9008764863852162 99