Sequence Description Alias PCC hrr AMTR_s00066p00134410 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.129 0.9394216099465423 1 AMTR_s00058p00125550 evm_27.TU.AmTr_v1.0_scaffold00058.89 0.9095394990055221 2 AMTR_s00155p00028780 Protein PAT1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.12 0.9024187537971815 3 AMTR_s00032p00133570 Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor evm_27.TU.AmTr_v1.0_scaffold00032.93 0.8900511062453281 4 AMTR_s00029p00022290 Transcription factor SRM1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.5 0.889489941523846 5 AMTR_s00089p00089760 evm_27.TU.AmTr_v1.0_scaffold00089.47 0.8868786025881819 14 AMTR_s00060p00138860 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase evm_27.TU.AmTr_v1.0_scaffold00060.78 0.8819732181377415 7 AMTR_s00155p00079840 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF30/Yth1 component evm_27.TU.AmTr_v1.0_scaffold00155.52 0.8785372476736738 17 AMTR_s00002p00195630 RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.178 0.8778243676264743 9 AMTR_s00021p00254700 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Tim17 component evm_27.TU.AmTr_v1.0_scaffold00021.299 0.8745927367999807 10 AMTR_s00060p00187100 F-box protein SKIP28 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00060.123 0.8745350584824823 11 AMTR_s00078p00155240 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor evm_27.TU.AmTr_v1.0_scaffold00078.136 0.8739942826323662 14 AMTR_s00010p00267840 evm_27.TU.AmTr_v1.0_scaffold00010.544 0.8693021940245009 13 AMTR_s00119p00117410 RNA biosynthesis.transcriptional activation.EIL (EIN3-like) transcription factor evm_27.TU.AmTr_v1.0_scaffold00119.91 0.8675843451372096 14 AMTR_s00156p00043680 evm_27.TU.AmTr_v1.0_scaffold00156.20 0.8673660931126795 15 AMTR_s00049p00211440 Vesicle trafficking.autophagosome formation.cargo recruitment.NBR1 autophagic adapter protein evm_27.TU.AmTr_v1.0_scaffold00049.238 0.86582680039927 16 AMTR_s00032p00053220 Phytohormones.ethylene.perception and signal transduction.ETR/ERS-type receptor protein evm_27.TU.AmTr_v1.0_scaffold00032.33 0.8640856684812807 31 AMTR_s00017p00035550 RNA biosynthesis.transcriptional activation.TCP transcription factor evm_27.TU.AmTr_v1.0_scaffold00017.13 0.8634112644798376 18 AMTR_s00004p00109230 RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.Sm-B component evm_27.TU.AmTr_v1.0_scaffold00004.87 0.8623021192420813 19 AMTR_s00006p00266790 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.UAfT nucleotide sugar transporter evm_27.TU.AmTr_v1.0_scaffold00006.292 0.8620978236723532 20 AMTR_s00006p00268060 Enzyme classification.EC_1 oxidoreductases.EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor evm_27.TU.AmTr_v1.0_scaffold00006.309 0.8616892610518534 21 AMTR_s00019p00206980 Calmodulin-binding protein 60 B OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.246 0.8608276030325334 22 AMTR_s00056p00074670 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP35 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00056.54 0.8605024150108128 23 AMTR_s00001p00262160 External stimuli response.biotic stress.systemic acquired resistance (SAR).pipecolic acid biosynthesis.SARD4 cyclodeaminase evm_27.TU.AmTr_v1.0_scaffold00001.383 0.8582779835728483 24 AMTR_s00035p00187610 Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00035.40 0.8574254340718531 25 AMTR_s00142p00104490 evm_27.TU.AmTr_v1.0_scaffold00142.68 0.8537333198279016 26 AMTR_s00022p00176740 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00022.187 0.8536942199969628 27 AMTR_s00177p00046770 Enzyme classification.EC_1 oxidoreductases.EC_1.2 oxidoreductase acting on aldehyde or oxo group of donor evm_27.TU.AmTr_v1.0_scaffold00177.22 0.852787079815561 28 AMTR_s00174p00040410 Protein modification.dephosphorylation.tyrosine protein phosphatase (PTP) superfamily.dual-specificity phosphatase families.MAP-kinase phosphatase evm_27.TU.AmTr_v1.0_scaffold00174.16 0.8509973957303807 29 AMTR_s00072p00117380 Cell division control protein 48 homolog D OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.59 0.8491428003828427 78 AMTR_s00226p00023090 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED4 component evm_27.TU.AmTr_v1.0_scaffold00226.12 0.8489062405938393 31 AMTR_s00142p00054380 RNA processing.RNA quality control Exon Junction complex (EJC).core components.CASC3 component evm_27.TU.AmTr_v1.0_scaffold00142.31 0.8481792211927668 32 AMTR_s00085p00052820 Cell division cycle protein 48 homolog OS=Glycine max evm_27.TU.AmTr_v1.0_scaffold00085.22 0.8473067591657188 96 AMTR_s00045p00185750 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC15 component evm_27.TU.AmTr_v1.0_scaffold00045.231 0.8472869712135221 34 AMTR_s00056p00036030 RNA biosynthesis.transcriptional repression.AFP/NINJA transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00056.20 0.8468040271590508 35 AMTR_s00046p00170580 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).SMG7 protein evm_27.TU.AmTr_v1.0_scaffold00046.93 0.8461216730266822 36 AMTR_s00021p00110500 UBP1-associated protein 2C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.59 0.8453923120921331 37 AMTR_s00147p00043750 Protein translocation.nucleus.nucleocytoplasmic transport.importin alpha adaptor proteins evm_27.TU.AmTr_v1.0_scaffold00147.17 0.845340316624213 40 AMTR_s00088p00141580 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type evm_27.TU.AmTr_v1.0_scaffold00088.108 0.844175573868658 39 AMTR_s00133p00101570 DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.46 0.8424018889857942 96 AMTR_s00004p00045050 FRIGIDA-like protein 4a OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.28 0.842335398333407 41 AMTR_s00013p00198120 Vesicle trafficking.target membrane tethering.Exocyst complex.EXO70 component evm_27.TU.AmTr_v1.0_scaffold00013.132 0.8413892291102583 42 AMTR_s00022p00096260 UPF0496 protein At3g19330 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.76 0.8403517583246078 43 AMTR_s00036p00181640 Protein biosynthesis.translation initiation.mRNA loading.eIF4A mRNA unwinding factor evm_27.TU.AmTr_v1.0_scaffold00036.91 0.8380125087532284 45 AMTR_s00028p00246730 Protein modification.phosphorylation.TKL kinase superfamily.LRR-X kinase families.LRR-Xa kinase evm_27.TU.AmTr_v1.0_scaffold00028.142 0.8376475934542711 46 AMTR_s00069p00195010 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00069.205 0.8375087636300501 47 AMTR_s00069p00158470 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component evm_27.TU.AmTr_v1.0_scaffold00069.131 0.8374676464164925 48 AMTR_s00041p00167350 External stimuli response.temperature.Csd (cold-shock-domain) protein 0.8364733465777344 49 AMTR_s00099p00081960 Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.60 0.8342947922675352 95 AMTR_s00026p00162850 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.KNOX transcription factor evm_27.TU.AmTr_v1.0_scaffold00026.80 0.8338304977291564 51 AMTR_s00153p00065050 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBA-activating E1 protein evm_27.TU.AmTr_v1.0_scaffold00153.31 0.8326066065088156 64 AMTR_s00009p00261830 Phytohormones.brassinosteroid.perception and signal transduction.receptor complex.receptor kinase regulator protein (MSBP) evm_27.TU.AmTr_v1.0_scaffold00009.339 0.8322061759383685 53 AMTR_s00186p00042610 F-box protein At5g39450 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00186.15 0.8316184918920211 54 AMTR_s00024p00250640 Putative AC transposase OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00024.334 0.831046767660262 88 AMTR_s00157p00079360 Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00157.42 0.8304014467237221 56 AMTR_s00049p00205940 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00049.222 0.8289178387618559 57 AMTR_s00002p00206060 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3d component evm_27.TU.AmTr_v1.0_scaffold00002.205 0.8287330225406981 91 AMTR_s00092p00134420 Cell wall.hemicellulose.xyloglucan.modification and degradation.1,6-alpha-xylosidase evm_27.TU.AmTr_v1.0_scaffold00092.100 0.8286530732445967 59 AMTR_s00072p00034700 Universal stress protein PHOS32 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.7 0.8272118884915878 60 AMTR_s00004p00270260 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00004.294 0.8265022508209612 61 AMTR_s00064p00123160 RNA processing.RNA modification.tRNA N6-threonylcarbamoylation.KEOPS/EKC complex.BUD32 component evm_27.TU.AmTr_v1.0_scaffold00064.46 0.8245424467193831 62 AMTR_s00034p00071480 Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00034.17 0.8240789241861622 63 AMTR_s00176p00030330 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.electron input (module N).NQO3 component evm_27.TU.AmTr_v1.0_scaffold00176.9 0.8235038073988594 64 AMTR_s00004p00150000 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.Efl1 elongation-factor-like regulatory GTPase evm_27.TU.AmTr_v1.0_scaffold00004.154 0.8231852937509034 65 AMTR_s00146p00095280 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade A phosphatase evm_27.TU.AmTr_v1.0_scaffold00146.58 0.8226883027627113 66 AMTR_s00017p00253050 Protein modification.phosphorylation.TKL kinase superfamily.RKF3 kinase evm_27.TU.AmTr_v1.0_scaffold00017.262 0.8211300945253458 67 AMTR_s00012p00035940 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.ALY/Tho4 mRNA-binding adaptor component evm_27.TU.AmTr_v1.0_scaffold00012.6 0.8209752959623382 69 AMTR_s00020p00173350 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-arabinose synthesis.UDP-L-arabinose mutase evm_27.TU.AmTr_v1.0_scaffold00020.62 0.8209588693281211 70 AMTR_s00072p00045010 Protein modification.phosphorylation.TKL kinase superfamily.G-Lectin kinase families.SD-2 kinase evm_27.TU.AmTr_v1.0_scaffold00072.15 0.8205040371458114 71 AMTR_s00022p00184250 evm_27.TU.AmTr_v1.0_scaffold00022.196 0.8191172065332184 73 AMTR_s00025p00131080 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component evm_27.TU.AmTr_v1.0_scaffold00025.129 0.8185124799179565 94 AMTR_s00021p00059810 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate (PEP) carboxylase activity.PEP carboxylase evm_27.TU.AmTr_v1.0_scaffold00021.28 0.8172259866453194 76 AMTR_s00006p00265000 Tryptophan synthase beta chain 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.271 0.8161411840548874 77 AMTR_s00044p00145170 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.U-Box E3 ligase activities.PUB-type evm_27.TU.AmTr_v1.0_scaffold00044.147 0.8158087875538677 78 AMTR_s00108p00100120 Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond evm_27.TU.AmTr_v1.0_scaffold00108.17 0.8145351095812144 79 AMTR_s00101p00128190 Transcription factor LUX OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.100 0.8125390003050501 81 AMTR_s00045p00036790 Protein degradation.peptidase families.cysteine-type peptidase activities.papain-type protease evm_27.TU.AmTr_v1.0_scaffold00045.14 0.812474278319909 82 AMTR_s00027p00237390 RNA biosynthesis.transcriptional activation.TUB transcription factor evm_27.TU.AmTr_v1.0_scaffold00027.130 0.8108317124795403 85 AMTR_s00048p00118270 Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein evm_27.TU.AmTr_v1.0_scaffold00048.61 0.8100204971883294 89 AMTR_s00003p00259950 evm_27.TU.AmTr_v1.0_scaffold00003.336 0.8093779822918498 90 AMTR_s00001p00261430 Multi-process regulation.circadian clock.evening element regulation.REVEILLE clock factor evm_27.TU.AmTr_v1.0_scaffold00001.380 0.8085410835113735 91 AMTR_s00185p00053640 Barley B recombinant-like protein D OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00185.22 0.8081932189142619 93 AMTR_s00002p00243900 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.BEL transcription factor evm_27.TU.AmTr_v1.0_scaffold00002.320 0.8080457476251535 94 AMTR_s00004p00073360 evm_27.TU.AmTr_v1.0_scaffold00004.54 0.8062205648793 96 AMTR_s00069p00104060 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN1 component evm_27.TU.AmTr_v1.0_scaffold00069.66 0.8048602273863412 97 AMTR_s00171p00039640 evm_27.TU.AmTr_v1.0_scaffold00171.16 0.8048205029579575 98