Sequence Description Alias PCC hrr GSVIVT01017821001 0.8744680613759092 2 GSVIVT01012044001 0.8699100680454397 5 GSVIVT01009206001 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase 0.866013497000732 6 GSVIVT01000922001 0.8619359491375629 11 GSVIVT01017820001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor 0.8586020287496449 6 GSVIVT01029442001 RNA biosynthesis.transcriptional activation.TAZ histone acetylase transcription factor 0.8583327025463455 18 GSVIVT01026933001 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component 0.858003628300592 17 GSVIVT01011619001 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component 0.8534355786620099 23 GSVIVT01009695001 0.8528338531186417 23 GSVIVT01018721001 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.8500070317453305 12 GSVIVT01019359001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1) 0.8491000383399796 35 GSVIVT01036698001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin 0.8487715051085799 47 GSVIVT01031879001 Protein modification.phosphorylation.atypical kinase families.PIKK kinase 0.8458672958543858 21 GSVIVT01018154001 0.8442890132691445 14 GSVIVT01034169001 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) 0.8416644616783173 15 GSVIVT01025508001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.NUP214 nucleoporin 0.8405420090497056 16 GSVIVT01007875001 DExH-box ATP-dependent RNA helicase DExH14 OS=Arabidopsis thaliana 0.8377201031429121 17 GSVIVT01034941001 0.8371940466147582 18 GSVIVT01033231001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor 0.836842329014166 44 GSVIVT01007885001 0.836122390130003 42 GSVIVT01010842001 Flowering time control protein FPA OS=Arabidopsis thaliana 0.8347524249242598 21 GSVIVT01025470001 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease 0.8337416976935755 81 GSVIVT01016353001 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component 0.8337303657217716 25 GSVIVT01004716001 0.8331326901353743 41 GSVIVT01029557001 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription termination.helicase (SEN1) 0.8331131858930448 25 GSVIVT01008079001 0.8322718240760395 26 GSVIVT01037040001 Multi-process regulation.TOR signalling pathway.TORC complex.TOR kinase component 0.8319960669227274 27 GSVIVT01024708001 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion.heavy chain 0.8315511388495092 34 GSVIVT01030649001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component 0.8298227069743722 49 GSVIVT01022139001 0.8277053943136771 30 GSVIVT01013247001 RNA processing.RNA decay.Nonsense-Mediated mRNA Decay (NMD).UPF1 effector protein 0.8256261641598883 31 GSVIVT01000874001 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.8231298734887584 32 GSVIVT01016794001 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.REA1 assembly factor (MDN1) 0.8230631785289658 33 GSVIVT01019366001 0.8222933710419015 52 GSVIVT01007806001 0.8219947120282038 35 GSVIVT01008802001 RNA processing.RNA decay.exosome complex.associated co-factors.SOP1 RNA degradation surveillance factor 0.8214266695536493 36 GSVIVT01026952001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Snf2 chromatin remodeling factor 0.8207621236791366 49 GSVIVT01003381001 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALA P4-type ATPase component 0.8203366240913633 38 GSVIVT01020162001 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.VIR regulatory component 0.8202637148805753 39 GSVIVT01023517001 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor 0.8195188360518084 40 GSVIVT01005756001 0.8194469368335304 41 GSVIVT01032923001 0.818006363662806 42 GSVIVT01022256001 0.8167651765220187 43 GSVIVT01005092001 0.8166298773631379 44 GSVIVT01009834001 Lysine-specific histone demethylase 1 homolog 3 OS=Arabidopsis thaliana 0.8166264640324704 45 GSVIVT01000835001 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.MAC7 component 0.8151662630275631 63 GSVIVT01036514001 0.8149585121669795 47 GSVIVT01007917001 0.8129086689612538 56 GSVIVT01025465001 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED13 component 0.8118162951892752 49 GSVIVT01028685001 Chromatin modification-related protein EAF1 A OS=Arabidopsis thaliana 0.8094285367219299 62 GSVIVT01012117001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.8049577252720225 53 GSVIVT01016309001 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.PWR component 0.8032760876423917 54 GSVIVT01007327001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor 0.8021614201416472 55 GSVIVT01022591001 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-III complex-specific components.TRS85 component 0.8021465257391027 56 GSVIVT01034942001 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.HECT E3 monomeric ligase 0.8000250716999063 57 GSVIVT01037235001 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.CHR5 component 0.7991979472911269 58 GSVIVT01012774001 Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana 0.798551516433135 59 GSVIVT01008944001 Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana 0.7985109522440117 60 GSVIVT01037231001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.7983748545933914 61 GSVIVT01022255001 0.7975204449058116 62 GSVIVT01021009001 0.7973634171395056 63 GSVIVT01011680001 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED23 component 0.7972754723448129 64 GSVIVT01025073001 0.7970844406659596 65 GSVIVT01009194001 BEACH domain-containing protein B OS=Arabidopsis thaliana 0.796403737619857 66 GSVIVT01032137001 Protein OBERON 4 OS=Arabidopsis thaliana 0.7959784772259227 67 GSVIVT01008473001 Protein modification.phosphorylation.AGC kinase superfamily.MAST kinase 0.7901386484893056 68 GSVIVT01021781001 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED14 component 0.7889045199986505 69 GSVIVT01027171001 0.7870448712232228 72 GSVIVT01012049001 RNA biosynthesis.transcriptional activation.HUA2 transcription factor 0.7861995335365983 71 GSVIVT01002824001 0.7854514540829731 72 GSVIVT01004707001 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.Sec16 Sar1-GTPase-regulating protein 0.7829449556404785 80 GSVIVT01002823001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor 0.781361205860592 75 GSVIVT01020605001 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HOX-like transcription factor 0.7786914623001179 76 GSVIVT01007911001 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 OS=Arabidopsis thaliana 0.778572958103163 84 GSVIVT01007703001 Protein MODIFIER OF SNC1 1 OS=Arabidopsis thaliana 0.7784357977713777 97 GSVIVT01023952001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.MINIYO regulator protein 0.77757726994853 79 GSVIVT01001448001 Putative disease resistance protein RGA3 OS=Solanum bulbocastanum 0.7766803159412884 80 GSVIVT01015158001 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA3 component 0.7751920301170754 87 GSVIVT01036538001 Phytohormones.auxin.transport.polar auxin transport.BIG regulator protein 0.7750299588971099 83 GSVIVT01025216001 Helicase protein MOM1 OS=Arabidopsis thaliana 0.7746654863647099 84 GSVIVT01033179001 COP1-interactive protein 1 OS=Arabidopsis thaliana 0.7746279316540596 86 GSVIVT01017643001 0.7728146240119669 88 GSVIVT01032627001 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component 0.7727495745569894 89 GSVIVT01029863001 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana 0.7715666796278126 90 GSVIVT01006404001 0.7713500767945859 91 GSVIVT01002731001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor 0.7698294671839023 92 GSVIVT01025700001 Phytohormones.ethylene.perception and signal transduction.EIN2-type signal transducer 0.7694456285405843 93 GSVIVT01000087001 DNA damage response.DNA repair polymerase activities.DNA polymerase zeta complex.REV3 catalytic subunit 0.7691739603343557 95 GSVIVT01033178001 COP1-interactive protein 1 OS=Arabidopsis thaliana 0.7666857051125034 97 GSVIVT01037358001 Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana 0.7653055047297354 98 GSVIVT01030942001 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).LIG6-type DNA ligase 0.7652358916750778 99 GSVIVT01019537001 0.7651297659303979 100