Sequence Description Alias PCC hrr AMTR_s00002p00140630 Protein biosynthesis.translation initiation.mRNA loading.eIF4F mRNA unwinding complex.eIF4G component evm_27.TU.AmTr_v1.0_scaffold00002.103 0.9305370844585045 1 AMTR_s00133p00101570 DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.46 0.9232654501375145 3 AMTR_s00099p00081960 Pentatricopeptide repeat-containing protein At1g10270 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.60 0.9139521920522249 3 AMTR_s00056p00074670 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).central subcomplex.NUP35 nucleoporin evm_27.TU.AmTr_v1.0_scaffold00056.54 0.9135677939749477 4 AMTR_s00049p00198350 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VIII kinase evm_27.TU.AmTr_v1.0_scaffold00049.210 0.9131550386170688 5 AMTR_s00001p00220200 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00001.228 0.9107669833092181 6 AMTR_s00002p00269760 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00002.558 0.91012217952442 7 AMTR_s00077p00082680 RNA biosynthesis.transcriptional activation.B3 superfamily.LAV-VAL transcription factor evm_27.TU.AmTr_v1.0_scaffold00077.66 0.9095672470082868 12 AMTR_s00082p00053170 evm_27.TU.AmTr_v1.0_scaffold00082.2 0.9048032948562283 9 AMTR_s00012p00251030 Pumilio homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.251 0.8967122434235953 12 AMTR_s00089p00034850 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component evm_27.TU.AmTr_v1.0_scaffold00089.9 0.8947675822634455 26 AMTR_s00021p00254700 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Tim17 component evm_27.TU.AmTr_v1.0_scaffold00021.299 0.8945726992845412 12 AMTR_s00021p00059810 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate (PEP) carboxylase activity.PEP carboxylase evm_27.TU.AmTr_v1.0_scaffold00021.28 0.8937442693417472 13 AMTR_s00032p00133570 Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor evm_27.TU.AmTr_v1.0_scaffold00032.93 0.8913037274106627 14 AMTR_s00051p00079490 RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00051.29 0.8894629488153626 16 AMTR_s00089p00089760 evm_27.TU.AmTr_v1.0_scaffold00089.47 0.8885083770886092 17 AMTR_s00004p00023800 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00004.8 0.8878171331208434 47 AMTR_s00024p00250640 Putative AC transposase OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00024.334 0.8872509625618221 19 AMTR_s00085p00052820 Cell division cycle protein 48 homolog OS=Glycine max evm_27.TU.AmTr_v1.0_scaffold00085.22 0.8862345719119497 20 AMTR_s00001p00273090 Pentatricopeptide repeat-containing protein At1g74750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00001.593 0.8860527504337234 21 AMTR_s00032p00053220 Phytohormones.ethylene.perception and signal transduction.ETR/ERS-type receptor protein evm_27.TU.AmTr_v1.0_scaffold00032.33 0.8838388294675085 22 AMTR_s00155p00028780 Protein PAT1 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.12 0.8834563214445551 23 AMTR_s00101p00033020 UBP1-associated protein 2A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.8 0.8815896646589636 24 AMTR_s00001p00229590 Protein translocation.nucleus.nucleocytoplasmic transport.Ran-GAP GTPase activating component evm_27.TU.AmTr_v1.0_scaffold00001.241 0.8789911326506445 25 AMTR_s00069p00127620 evm_27.TU.AmTr_v1.0_scaffold00069.88 0.8769264101380151 44 AMTR_s00155p00079840 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF30/Yth1 component evm_27.TU.AmTr_v1.0_scaffold00155.52 0.8765364314358531 27 AMTR_s00092p00127820 RNA processing.organelle machineries.RNA splicing.mitochondrial RNA splicing.group-II intron splicing.PMH RNA helicase evm_27.TU.AmTr_v1.0_scaffold00092.91 0.8753606487842412 61 AMTR_s00010p00228130 UBP1-associated protein 2A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.256 0.8751864621037518 29 AMTR_s00303p00010520 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00303.1 0.8715279898575037 72 AMTR_s00078p00190750 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp70 family.Hsp110 protein evm_27.TU.AmTr_v1.0_scaffold00078.198 0.8711945261762323 89 AMTR_s00066p00134410 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.129 0.8675385468425476 32 AMTR_s00048p00020720 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC10 component evm_27.TU.AmTr_v1.0_scaffold00048.3 0.8674121144413014 53 AMTR_s00016p00233120 Cell wall.sporopollenin.exine wall formation.NEF1 exine patterning factor evm_27.TU.AmTr_v1.0_scaffold00016.232 0.8671337815225262 47 AMTR_s00066p00174270 evm_27.TU.AmTr_v1.0_scaffold00066.204 0.8665520793478443 35 AMTR_s00106p00091710 evm_27.TU.AmTr_v1.0_scaffold00106.60 0.866472041736222 75 AMTR_s00023p00015970 RNA biosynthesis.transcriptional activation.FAR1 transcription factor evm_27.TU.AmTr_v1.0_scaffold00023.4 0.8657344820200158 46 AMTR_s00009p00232070 Protein modification.peptide maturation.endomembrane system.SPP signal peptidase evm_27.TU.AmTr_v1.0_scaffold00009.185 0.8650787342282894 95 AMTR_s00176p00030330 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.electron input (module N).NQO3 component evm_27.TU.AmTr_v1.0_scaffold00176.9 0.8639406596885679 41 AMTR_s00104p00076850 Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.arabinogalactan proteins (AGPs).glycosylation.AGP beta-1,6-glucuronosyltransferase evm_27.TU.AmTr_v1.0_scaffold00104.27 0.8638670952762025 42 AMTR_s00035p00187610 Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00035.40 0.8634782290703288 43 AMTR_s00059p00117370 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B4 component evm_27.TU.AmTr_v1.0_scaffold00059.91 0.8633794051298298 44 AMTR_s00024p00176520 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase evm_27.TU.AmTr_v1.0_scaffold00024.135 0.8632482354224633 45 AMTR_s00010p00265700 RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.513 0.8615353739722957 47 AMTR_s00029p00021500 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.4 0.8613762744430111 48 AMTR_s00025p00131080 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component evm_27.TU.AmTr_v1.0_scaffold00025.129 0.8613128931093081 49 AMTR_s00061p00036160 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.Hsp90 protein 0.8611158014812599 50 AMTR_s00066p00190730 RNA biosynthesis.transcriptional activation.bZIP superfamily.bZIP transcription factor evm_27.TU.AmTr_v1.0_scaffold00066.242 0.8609485130637452 76 AMTR_s00049p00131180 evm_27.TU.AmTr_v1.0_scaffold00049.109 0.8593229271335114 53 AMTR_s00023p00230220 DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.183 0.8591663372475923 59 AMTR_s00038p00121420 Phytohormones.abscisic acid.perception and signalling.signal transducer (KEG) evm_27.TU.AmTr_v1.0_scaffold00038.67 0.8591214942139461 63 AMTR_s00163p00018060 Coenzyme metabolism.molybdenum cofactor synthesis.molybdenum ion insertion.bifunctional molybdopterin adenylyltransferase and molybdenumtransferase (CNX1) evm_27.TU.AmTr_v1.0_scaffold00163.5 0.8582489433518441 72 AMTR_s00001p00252660 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.ELF7/PAF1 component evm_27.TU.AmTr_v1.0_scaffold00001.325 0.8579966295280336 58 AMTR_s00078p00155240 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SF1 pre-mRNA splicing factor evm_27.TU.AmTr_v1.0_scaffold00078.136 0.8563322067795007 60 AMTR_s00016p00205550 evm_27.TU.AmTr_v1.0_scaffold00016.172 0.8544455827437604 64 AMTR_s00038p00018470 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIb basal transcription factor evm_27.TU.AmTr_v1.0_scaffold00038.3 0.8515637186808407 67 AMTR_s00153p00050640 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00153.22 0.85143223725165 68 AMTR_s00022p00108690 RNA processing.RNA modification.mRNA methylation.HAKAI E3 ubiquitin ligase evm_27.TU.AmTr_v1.0_scaffold00022.96 0.8512166716198617 69 AMTR_s00061p00194250 evm_27.TU.AmTr_v1.0_scaffold00061.226 0.8508504427129241 91 AMTR_s00033p00020260 Protein RMD5 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.5 0.8507266931147838 71 AMTR_s00019p00238830 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA1 component evm_27.TU.AmTr_v1.0_scaffold00019.346 0.8502699328457944 73 AMTR_s00007p00182220 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX-2 mRNP trafficking complex.GANP/SAC3 scaffold component evm_27.TU.AmTr_v1.0_scaffold00007.146 0.8502496288713045 74 AMTR_s00036p00181640 Protein biosynthesis.translation initiation.mRNA loading.eIF4A mRNA unwinding factor evm_27.TU.AmTr_v1.0_scaffold00036.91 0.8493068233435317 76 AMTR_s00025p00215680 Protein modification.phosphorylation.TKL kinase superfamily.MAP3K-RAF kinase evm_27.TU.AmTr_v1.0_scaffold00025.292 0.8491428003828427 78 AMTR_s00015p00209030 Solute transport.carrier-mediated transport.MC-type solute transporter evm_27.TU.AmTr_v1.0_scaffold00015.56 0.8480725645417205 81 AMTR_s00108p00114900 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.PWR component evm_27.TU.AmTr_v1.0_scaffold00108.27 0.8479207888500294 82 AMTR_s00153p00065050 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBA-activating E1 protein evm_27.TU.AmTr_v1.0_scaffold00153.31 0.8472666552323377 83 AMTR_s00046p00133890 evm_27.TU.AmTr_v1.0_scaffold00046.67 0.8472150841907603 84 AMTR_s00002p00175460 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.148 0.8465093159920051 87 AMTR_s00021p00110500 UBP1-associated protein 2C OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00021.59 0.845859706736192 90 AMTR_s00084p00172920 evm_27.TU.AmTr_v1.0_scaffold00084.45 0.8451505276279423 92 AMTR_s00001p00269200 RNA processing.RNA modification.uridylation.URT1 uridylyltransferase evm_27.TU.AmTr_v1.0_scaffold00001.433 0.8448703841045185 94 AMTR_s00101p00094580 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B1 component evm_27.TU.AmTr_v1.0_scaffold00101.72 0.844415224802322 95 AMTR_s00153p00079500 Pentatricopeptide repeat-containing protein At3g56030, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00153.43 0.8443961725586387 96 AMTR_s00009p00238900 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED12 component evm_27.TU.AmTr_v1.0_scaffold00009.205 0.8440658566920481 98 AMTR_s00065p00122030 Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00065.72 0.8440049445632613 99