Sequence Description Alias PCC hrr GSVIVT01034015001 RNA processing.RNA 5-end cap adding.mRNA capping enzyme 0.9065623633591127 1 GSVIVT01019359001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1) 0.8809333446690075 5 GSVIVT01033327001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 1 0.8719836060447208 13 GSVIVT01033231001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor 0.8576024027751082 25 GSVIVT01011125001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.XPD-type subunit 0.8575973871583181 5 GSVIVT01023097001 0.8516311063391492 6 GSVIVT01010209001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40C pre-mRNA-processing protein 0.8505066057492316 45 GSVIVT01024418001 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO1 export karyopherin 0.8478743263850025 21 GSVIVT01026995001 0.8468237040343941 14 GSVIVT01003951001 Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial OS=Arabidopsis thaliana 0.8449695100675807 10 GSVIVT01009695001 0.8447686891535925 29 GSVIVT01001899001 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.8424715546070943 12 GSVIVT01012004001 RNA processing.organelle machineries.RNA modification.tRNA adenine deamination.chloroplast-tRNA adenosine deaminase 0.840206217901331 13 GSVIVT01003381001 Solute transport.primary active transport.P-type ATPase superfamily.P4 family.phospholipid flippase complex.ALA P4-type ATPase component 0.8382658639388844 19 GSVIVT01036698001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin 0.8370630361295911 60 GSVIVT01030051001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP133 scaffold nucleoporin 0.8345387020822874 74 GSVIVT01018223001 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCa-type E3 ligase 0.8344943747097363 20 GSVIVT01024104001 0.8335898013063592 46 GSVIVT01013627001 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS3 CORVET-specific component 0.8323766381468494 22 GSVIVT01033511001 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana 0.8321450907299436 78 GSVIVT01003416001 RNA processing.RNA modification.rRNA/tRNA methylation.TRM4 tRNA cytidine-methyltransferase 0.8319358809304378 21 GSVIVT01013976001 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP10 assembly factor 0.8306578684898591 51 GSVIVT01011157001 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component 0.8305817383606188 86 GSVIVT01025470001 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease 0.8303680697554527 88 GSVIVT01009948001 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS35 component 0.8303579231487772 25 GSVIVT01038082001 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.8291073538075604 27 GSVIVT01014679001 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.8279929371682058 28 GSVIVT01011024001 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.NDX transcription factor 0.8279364219608122 29 GSVIVT01010035001 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor 0.8274019981157774 48 GSVIVT01036518001 RNA biosynthesis.organelle machineries.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP) 0.827022083281625 31 GSVIVT01010750001 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana 0.826386929183612 32 GSVIVT01008230001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF2 component 0.8259571395032571 33 GSVIVT01019537001 0.8241249403878927 34 GSVIVT01033442001 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.CCR4 deadenylase component 0.8236039768949827 36 GSVIVT01011619001 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component 0.823348155799754 54 GSVIVT01020543001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 0.8230968337432671 38 GSVIVT01035014001 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.8230351099091673 39 GSVIVT01019046001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component 0.8227225125933241 40 GSVIVT01000835001 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.MAC7 component 0.8215201228942293 52 GSVIVT01017791001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Iswi chromatin remodeling factor 0.8198544478912142 42 GSVIVT01034996001 FIP1[V]-like protein OS=Arabidopsis thaliana 0.8193302150208988 43 GSVIVT01009302001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40A pre-mRNA-processing protein 0.8188618852525342 44 GSVIVT01032944001 0.8174845874325717 45 GSVIVT01000874001 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.8169278666373657 46 GSVIVT01001478001 0.8164455001261787 78 GSVIVT01005813001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ELYS scaffold nucleoporin 0.8161721747873556 88 GSVIVT01000649001 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC6-type golgin 0.816003801927636 49 GSVIVT01015005001 RNA biosynthesis.transcriptional activation.ARID transcription factor 0.8159093139365668 50 GSVIVT01006448001 Protein modification.dephosphorylation.aspartate-based protein phosphatase superfamily.FCP phosphatase families.CPL1/2 phosphatase 0.8156222837953914 51 GSVIVT01020162001 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.VIR regulatory component 0.8146108852595537 52 GSVIVT01021163001 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 OS=Arabidopsis thaliana 0.8144464192525919 53 GSVIVT01000572001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.GLE1 scaffold nucleoporin 0.814058342970555 54 GSVIVT01016980001 Coenzyme metabolism.iron-sulfur cluster assembly machineries.cytosolic CIA system.transfer phase.MMS19 component 0.813362728291562 55 GSVIVT01035985001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).SR140 snRNP-associated protein 0.8126123040586909 56 GSVIVT01016590001 RNA biosynthesis.RNA polymerase II-dependent transcription.ELONGATOR transcription elongation complex.ELP1 component 0.812437439757009 63 GSVIVT01017686001 0.8120888473135482 100 GSVIVT01012163001 Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.8115495310449474 59 GSVIVT01016885001 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B-type regulatory component 0.8098452576228969 60 GSVIVT01026496001 Phosphatidylinositol 4-kinase beta 1 OS=Arabidopsis thaliana 0.8086805781730381 64 GSVIVT01009365001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIId basal transcription regulation complex.TAF4 component 0.8078950329194828 65 GSVIVT01020844001 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS16/VCL1 component 0.8078599357840535 66 GSVIVT01019761001 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor 0.8074911800786635 67 GSVIVT01030649001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component 0.8074054345629366 87 GSVIVT01036797001 0.8065415283666335 69 GSVIVT01028366001 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B2-type regulatory component 0.8057173283586839 70 GSVIVT01035873001 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.EREX canonical RAB5 effector 0.8054190138923378 71 GSVIVT01033430001 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.RRP5 assembly factor 0.8049474247779046 72 GSVIVT01017770001 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.8049413754732424 87 GSVIVT01012038001 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana 0.8048141433323341 74 GSVIVT01034169001 Protein degradation.N-end rule pathway of targeted proteolysis.N-recognin-mediated ubiquitination.type-I-residues E3 ubiquitin ligase (PRT6) 0.8036041861879163 76 GSVIVT01013767001 Vesicle trafficking.endomembrane trafficking.PI3-kinase vesicle nucleation complex I/II.VPS34/PI3K phosphatidylinositol 3-kinase component 0.8028117109706415 77 GSVIVT01028153001 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 OS=Arabidopsis thaliana 0.8026340071510188 78 GSVIVT01016742001 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.XPO3/XPOT export karyopherin 0.8024344150723509 79 GSVIVT01017767001 Multi-process regulation.SnRK1 metabolic regulator system.SnRK1 kinase complex.betagamma regulatory subunit 0.802183949551563 80 GSVIVT01029697001 0.8018839819819725 82 GSVIVT01037455001 RNA biosynthesis.transcriptional activation.FAR1 transcription factor 0.8010089500343246 83 GSVIVT01025725001 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.8006572363377061 84 GSVIVT01028150001 0.7996878642411841 85 GSVIVT01020281001 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.7986098385952389 86 GSVIVT01038091001 0.7978480592442913 87 GSVIVT01016353001 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component 0.7971111139789561 88 GSVIVT01013204001 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana 0.7969470162545826 89 GSVIVT01000025001 L10-interacting MYB domain-containing protein OS=Arabidopsis thaliana 0.7959316130729259 92 GSVIVT01028685001 Chromatin modification-related protein EAF1 A OS=Arabidopsis thaliana 0.7955879391381281 93 GSVIVT01025385001 Protein modification.phosphorylation.CK kinase superfamily.MLK protein kinase 0.7955159003398504 94 GSVIVT01019063001 0.795331131979896 96 GSVIVT01025465001 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.kinase module.MED13 component 0.7952439629723573 97 GSVIVT01021379001 Protein MEI2-like 2 OS=Oryza sativa subsp. japonica 0.7941207703539499 99