Sequence Description Alias PCC hrr AMTR_s00007p00259060 Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.316 0.9535137162741723 1 AMTR_s00131p00040500 Small RNA degrading nuclease 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00131.25 0.9419438245608687 3 AMTR_s00027p00217440 evm_27.TU.AmTr_v1.0_scaffold00027.80 0.9405895795803291 3 AMTR_s00046p00229090 evm_27.TU.AmTr_v1.0_scaffold00046.172 0.9373181124173527 4 AMTR_s00004p00166400 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00004.183 0.9334631300345231 5 AMTR_s00066p00145760 evm_27.TU.AmTr_v1.0_scaffold00066.147 0.9331221767373866 6 AMTR_s00036p00239020 Chromatin organisation.histone modifications.histone arginine methylation.PRMT1 histone methylase evm_27.TU.AmTr_v1.0_scaffold00036.188 0.9300349160378465 7 AMTR_s00059p00212210 evm_27.TU.AmTr_v1.0_scaffold00059.248 0.9293330379838503 8 AMTR_s00062p00113470 DEAD-box ATP-dependent RNA helicase 35 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00062.93 0.9258966598710583 15 AMTR_s00063p00100200 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.17 0.9243785835885036 13 AMTR_s00109p00054710 Solute transport.primary active transport.V-type ATPase complex.peripheral V1 subcomplex.subunit B evm_27.TU.AmTr_v1.0_scaffold00109.40 0.9232262812709541 11 AMTR_s00025p00212870 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00025.284 0.9224639814451457 24 AMTR_s00021p00164610 Solute transport.carrier-mediated transport.CDF superfamily.CaCA family.cation exchanger (NCL/EF-CAX-type) evm_27.TU.AmTr_v1.0_scaffold00021.119 0.9199436037781267 13 AMTR_s00102p00095780 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00102.50 0.9194052768805904 19 AMTR_s00057p00039750 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKD/CDK7 kinase evm_27.TU.AmTr_v1.0_scaffold00057.19 0.919113131782733 15 AMTR_s00149p00026500 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit evm_27.TU.AmTr_v1.0_scaffold00149.8 0.9190888893252356 16 AMTR_s00058p00127050 Protein biosynthesis.aminoacyl-tRNA synthetase activities.proline-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00058.91 0.9186008514729203 17 AMTR_s00109p00071210 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3l component evm_27.TU.AmTr_v1.0_scaffold00109.55 0.9169569836712708 53 AMTR_s00059p00133780 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.DGL1 component evm_27.TU.AmTr_v1.0_scaffold00059.112 0.9154373843442167 47 AMTR_s00009p00247290 Phytohormones.jasmonic acid.synthesis.acyl-CoA thioesterase evm_27.TU.AmTr_v1.0_scaffold00009.243 0.9153322819594731 20 AMTR_s00177p00032620 Probable mitochondrial saccharopine dehydrogenase-like oxidoreductase At5g39410 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.11 0.9151598739507925 21 AMTR_s00209p00023450 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00209.4 0.9151167371243938 27 AMTR_s00142p00013680 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.beta2 subunit evm_27.TU.AmTr_v1.0_scaffold00142.4 0.9150962393483882 23 AMTR_s00029p00106010 Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.107 0.913375307850684 24 AMTR_s00044p00164390 Histone-binding protein MSI1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.179 0.9133644777717658 60 AMTR_s00014p00250090 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit evm_27.TU.AmTr_v1.0_scaffold00014.130 0.9133567861399206 26 AMTR_s00056p00180950 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00056.160 0.9128427779895731 27 AMTR_s00078p00100600 Solute transport.porins.VDAC voltage-gated anion channel evm_27.TU.AmTr_v1.0_scaffold00078.71 0.9108387191194864 28 AMTR_s00072p00157670 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.PES component evm_27.TU.AmTr_v1.0_scaffold00072.97 0.9089614782677031 30 AMTR_s00071p00045940 Vesicle trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.Sec24 component evm_27.TU.AmTr_v1.0_scaffold00071.24 0.9087879259625901 31 AMTR_s00010p00016450 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit evm_27.TU.AmTr_v1.0_scaffold00010.5 0.9086377357842997 38 AMTR_s00109p00121860 evm_27.TU.AmTr_v1.0_scaffold00109.121 0.9081453328497457 33 AMTR_s00106p00013240 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.SWA2/NOC1 assembly factor evm_27.TU.AmTr_v1.0_scaffold00106.3 0.9080165830676871 34 AMTR_s00002p00059110 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00002.23 0.9071390399947907 51 AMTR_s00046p00164820 Protein modification.acetylation.NatC-type N-terminal acetylase complex.NAA35 auxiliary component evm_27.TU.AmTr_v1.0_scaffold00046.88 0.9063139198206329 76 AMTR_s00036p00071330 Developmentally-regulated G-protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00036.25 0.905842663536709 63 AMTR_s00010p00259590 DExH-box ATP-dependent RNA helicase DExH18, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.424 0.905115993384818 38 AMTR_s00065p00185540 Protein modification.N-linked glycosylation.complex N-glycan maturation.class-II glucosidase II complex.subunit alpha evm_27.TU.AmTr_v1.0_scaffold00065.158 0.9045648221129672 39 AMTR_s00019p00255470 Protein biosynthesis.translation elongation.eEF1B eEF1A-GDP-recycling complex.eEF1B-gamma component evm_27.TU.AmTr_v1.0_scaffold00019.442 0.9045569439568616 40 AMTR_s00072p00168660 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS54 GARP-specific component evm_27.TU.AmTr_v1.0_scaffold00072.118 0.9043779711365487 41 AMTR_s00049p00084680 Cell wall.cell wall proteins.hydroxyproline-rich glycoproteins.extensins (EXTs).glycosylation.EXT serine O-alpha-galactosyltransferase evm_27.TU.AmTr_v1.0_scaffold00049.55 0.9036010576417444 48 AMTR_s00119p00124540 Protein translocation.mitochondrion.outer mitochondrion membrane TOM translocation system.Tom40 component evm_27.TU.AmTr_v1.0_scaffold00119.97 0.9034345836166581 43 AMTR_s00061p00180830 Protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.199 0.9032596964350508 44 AMTR_s00006p00256440 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.eIF2-gamma component evm_27.TU.AmTr_v1.0_scaffold00006.192 0.9032264017341962 55 AMTR_s00101p00087960 Nucleotide metabolism.purines.phosphotransfers.guanylate kinase evm_27.TU.AmTr_v1.0_scaffold00101.64 0.903180763295345 46 AMTR_s00040p00226100 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Rad5 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00040.267 0.9028552756283351 71 AMTR_s00029p00094300 RNA processing.RNA quality control Exon Junction complex (EJC).core components.eIF4A3 helicase component evm_27.TU.AmTr_v1.0_scaffold00029.87 0.9014192395306466 48 AMTR_s00062p00159540 DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00062.149 0.9012563261469747 49 AMTR_s00040p00223590 DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.260 0.9008005987126484 50 AMTR_s00033p00216190 Cell cycle.organelle machineries.organelle fission.mitochondrion and peroxisome division.DRP3 dynamin-like protein evm_27.TU.AmTr_v1.0_scaffold00033.191 0.9007071362062161 51 AMTR_s00007p00105480 Protein modification.phosphorylation.CAMK kinase superfamily.CDPK kinase evm_27.TU.AmTr_v1.0_scaffold00007.63 0.9006185994676094 52 AMTR_s00136p00065750 Cellular respiration.glycolysis.cytosolic glycolysis.phosphofructokinase activities.pyrophosphate-dependent phosphofructokinase evm_27.TU.AmTr_v1.0_scaffold00136.32 0.8989527421531778 53 AMTR_s00071p00153630 Ran-binding protein M homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.142 0.8977308500920061 54 AMTR_s00022p00213770 evm_27.TU.AmTr_v1.0_scaffold00022.253 0.8971284486023928 55 AMTR_s00020p00233960 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.BET3 component evm_27.TU.AmTr_v1.0_scaffold00020.105 0.8967750031454333 56 AMTR_s00019p00256050 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3c component evm_27.TU.AmTr_v1.0_scaffold00019.448 0.8959516635257543 58 AMTR_s00022p00154500 RNA biosynthesis.RNA polymerase I-dependent transcription.TFIa/RRN3 basal transcription factor evm_27.TU.AmTr_v1.0_scaffold00022.156 0.8957689246248565 59 AMTR_s00010p00265700 RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.513 0.895349106351441 60 AMTR_s00101p00134540 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp4 assembly factor evm_27.TU.AmTr_v1.0_scaffold00101.112 0.8949583433432374 61 AMTR_s00092p00100450 Coenzyme metabolism.prenylquinone synthesis.plastoquinone synthesis.SPS3 solanesyl diphosphate synthase evm_27.TU.AmTr_v1.0_scaffold00092.58 0.894525017691834 62 AMTR_s00109p00056900 La protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.42 0.8942267852413208 63 AMTR_s00009p00255020 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase evm_27.TU.AmTr_v1.0_scaffold00009.276 0.8940887899825021 64 AMTR_s00029p00205680 DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00029.296 0.8933298022086859 67 AMTR_s00067p00205070 Protein translocation.peroxisome.importomer translocation system.receptor monoubiquitination system.Pex12 component evm_27.TU.AmTr_v1.0_scaffold00067.225 0.8930830618445086 68 AMTR_s00045p00182070 DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.224 0.8929987289155543 69 AMTR_s00019p00231450 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN5 component evm_27.TU.AmTr_v1.0_scaffold00019.317 0.8918244460398752 70 AMTR_s00023p00230220 DNA topoisomerase 6 subunit A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.183 0.890948528231459 74 AMTR_s00103p00063820 Protein AUXIN RESPONSE 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00103.32 0.8908806040188305 75 AMTR_s00061p00067260 High mobility group B protein 15 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.42 0.8908563512462916 76 AMTR_s00022p00104360 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT5 regulatory component evm_27.TU.AmTr_v1.0_scaffold00022.94 0.8908389314448011 77 AMTR_s00156p00017490 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.VPS9 RAB5 guanine nucleotide exchange factor evm_27.TU.AmTr_v1.0_scaffold00156.4 0.8908301621300447 78 AMTR_s00001p00249260 evm_27.TU.AmTr_v1.0_scaffold00001.310 0.8898189133701669 81 AMTR_s00109p00033810 Vesicle trafficking.endomembrane trafficking.vacuolar sorting.AP-4 vacuole cargo adaptor complex.AP4B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00109.22 0.8897323374455306 82 AMTR_s00019p00253350 Protein modification.N-linked glycosylation.complex N-glycan maturation.class-I alpha-mannosidase I evm_27.TU.AmTr_v1.0_scaffold00019.426 0.8894097278473602 83 AMTR_s00024p00115620 Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.65 0.8893177773654241 84 AMTR_s00088p00153240 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP133 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00088.123 0.8890075255741641 86 AMTR_s00088p00077590 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00088.47 0.8889902275782281 87 AMTR_s00303p00010520 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00303.1 0.8888523512268236 89 AMTR_s00064p00050700 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).DDX5 pre-mRNA splicing regulator evm_27.TU.AmTr_v1.0_scaffold00064.11 0.8884066327270983 90 AMTR_s00001p00094700 Protein degradation.peptidase families.metallopeptidase activities.M48 families.STE24 zinc metalloprotease evm_27.TU.AmTr_v1.0_scaffold00001.65 0.8876656616629365 91 AMTR_s00013p00135450 Protein biosynthesis.aminoacyl-tRNA synthetase activities.cysteine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00013.66 0.8875376721818165 92 AMTR_s00045p00223730 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein evm_27.TU.AmTr_v1.0_scaffold00045.315 0.8869588157737556 94 AMTR_s00036p00225190 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.UAP56 helicase component evm_27.TU.AmTr_v1.0_scaffold00036.165 0.8869034031600916 95 AMTR_s00006p00257410 evm_27.TU.AmTr_v1.0_scaffold00006.199 0.8865024528540258 96 AMTR_s00059p00069290 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.gamma subunit evm_27.TU.AmTr_v1.0_scaffold00059.44 0.8860498572967416 98 AMTR_s00001p00273100 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00001.594 0.8857480516459498 99 AMTR_s00066p00182330 Vesicle trafficking.target membrane tethering.Exocyst complex.SEC15 component evm_27.TU.AmTr_v1.0_scaffold00066.227 0.8855786905760501 100