Sequence Description Alias PCC hrr AMTR_s00021p00172560 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00021.126 0.9471812693100439 5 AMTR_s00149p00066780 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade C phosphatase evm_27.TU.AmTr_v1.0_scaffold00149.43 0.9455879841147353 2 AMTR_s00029p00198530 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC3/TTN7 component evm_27.TU.AmTr_v1.0_scaffold00029.274 0.9445722746712094 8 AMTR_s00056p00038090 RNA processing.ribonuclease activities.RNase Z endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00056.21 0.943254177414034 10 AMTR_s00070p00097310 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.transsulfuration pathway.cystathionine beta-lyase evm_27.TU.AmTr_v1.0_scaffold00070.48 0.9414936729815432 5 AMTR_s00003p00144740 evm_27.TU.AmTr_v1.0_scaffold00003.116 0.9411421895711793 6 AMTR_s00049p00011400 Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.2 0.9397583641824134 21 AMTR_s00020p00234520 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00020.106 0.9385246084521855 15 AMTR_s00017p00239150 Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00017.210 0.9372791180830666 17 AMTR_s00197p00040880 Pentatricopeptide repeat-containing protein At2g30780 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00197.21 0.9370479166908653 12 AMTR_s00014p00034060 Cell wall.callose.callose synthase evm_27.TU.AmTr_v1.0_scaffold00014.10 0.9358932057601034 17 AMTR_s00027p00223150 evm_27.TU.AmTr_v1.0_scaffold00027.94 0.933804662630497 12 AMTR_s00025p00149970 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).LIG4-XRCC4 ligase complex.LIG4 DNA ligase component evm_27.TU.AmTr_v1.0_scaffold00025.169 0.93376017590878 13 AMTR_s00017p00192140 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00017.112 0.9335921406058166 40 AMTR_s00080p00074320 Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00080.23 0.9309646439776523 16 AMTR_s00059p00193620 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase evm_27.TU.AmTr_v1.0_scaffold00059.214 0.9303574428350379 47 AMTR_s00491p00000370 5-3 exoribonuclease 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00491.1 0.9298144998409741 17 AMTR_s00025p00212870 Protein biosynthesis.aminoacyl-tRNA synthetase activities.aspartate-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00025.284 0.9295450851144771 18 AMTR_s00044p00033620 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Etl1 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00044.10 0.9293015389626459 19 AMTR_s00059p00150840 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.137 0.9292404172607764 20 AMTR_s00061p00026580 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase evm_27.TU.AmTr_v1.0_scaffold00061.1 0.9290004306889263 21 AMTR_s00009p00247750 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component evm_27.TU.AmTr_v1.0_scaffold00009.244 0.9280144152942794 62 AMTR_s00131p00071060 Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.PDS phytoene desaturase evm_27.TU.AmTr_v1.0_scaffold00131.42 0.9279055075485674 23 AMTR_s00119p00132020 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class IV ARF-GAP protein evm_27.TU.AmTr_v1.0_scaffold00119.107 0.9263845721929649 47 AMTR_s00037p00201510 Lipid metabolism.lipid A synthesis.LpxK tetra-acyl-disaccharide kinase evm_27.TU.AmTr_v1.0_scaffold00037.101 0.9255623205097576 25 AMTR_s00009p00261910 Probable DEAD-box ATP-dependent RNA helicase 48 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.342 0.9252398563114331 26 AMTR_s00003p00101050 evm_27.TU.AmTr_v1.0_scaffold00003.65 0.9250721115389686 43 AMTR_s00086p00165640 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00086.104 0.9247743506649614 64 AMTR_s00067p00078440 evm_27.TU.AmTr_v1.0_scaffold00067.54 0.9245540507455641 29 AMTR_s00071p00100010 Protein biosynthesis.aminoacyl-tRNA synthetase activities.histidine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00071.77 0.9243962472282853 30 AMTR_s00071p00175860 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic40 component evm_27.TU.AmTr_v1.0_scaffold00071.178 0.9241728588834337 31 AMTR_s00052p00118920 Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00052.39 0.9239366438886014 32 AMTR_s00138p00085700 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.CASP-type golgin evm_27.TU.AmTr_v1.0_scaffold00138.45 0.9234422322896818 33 AMTR_s00009p00184050 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) evm_27.TU.AmTr_v1.0_scaffold00009.114 0.92308802907303 46 AMTR_s00142p00022670 evm_27.TU.AmTr_v1.0_scaffold00142.6 0.9217671140085633 35 AMTR_s00045p00176400 Probable glutamyl endopeptidase, chloroplastic OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00045.212 0.9217618227570552 36 AMTR_s00040p00198390 Calmodulin-interacting protein 111 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.199 0.9216249671403329 56 AMTR_s00036p00170130 Nudix hydrolase 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00036.84 0.9215816718303391 38 AMTR_s00016p00241100 ALBINO3-like protein 3, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.254 0.9209511866797243 39 AMTR_s00122p00126300 evm_27.TU.AmTr_v1.0_scaffold00122.63 0.9209306202891581 40 AMTR_s00061p00196410 Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond evm_27.TU.AmTr_v1.0_scaffold00061.230 0.9209166197725304 41 AMTR_s00057p00185220 Probable serine/threonine-protein phosphatase 2A regulatory subunit B subunit TON2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00057.200 0.9205953016225292 42 AMTR_s00007p00157660 Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU processome component.PES-BOP1-WDR12 (PeBoW) complex.BOP1 component evm_27.TU.AmTr_v1.0_scaffold00007.120 0.9201656060829918 43 AMTR_s00007p00224640 GTP-binding protein At2g22870 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.219 0.9199347470530893 81 AMTR_s00092p00123760 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS53/HIT1 component evm_27.TU.AmTr_v1.0_scaffold00092.88 0.9194324211898957 46 AMTR_s00101p00092140 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ALADIN scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00101.69 0.9190993005557222 46 AMTR_s00013p00258230 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.RAD50 component evm_27.TU.AmTr_v1.0_scaffold00013.257 0.9183104109469371 47 AMTR_s00058p00198540 Protein modification.phosphorylation.STE kinase superfamily.MAP4K kinase evm_27.TU.AmTr_v1.0_scaffold00058.200 0.9181307345508007 48 AMTR_s00022p00221290 Clustered mitochondria protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.278 0.9178835099024634 69 AMTR_s00066p00184190 Putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.231 0.9174699176757172 50 AMTR_s00110p00154620 Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.130 0.9174088029086327 87 AMTR_s00053p00190690 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Swr1-like group.Ino80 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00053.139 0.9171175548459304 52 AMTR_s00022p00197640 Protein SINE1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.227 0.9169922607876785 53 AMTR_s00104p00134460 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.nuclear import and assembly regulation.MINIYO regulator protein evm_27.TU.AmTr_v1.0_scaffold00104.64 0.9161402177583627 55 AMTR_s00033p00106440 RNA processing.RNA modification.rRNA/tRNA methylation.TRM61-TRM6 tRNA adenosine-methyltransferase complex.TRM6 component evm_27.TU.AmTr_v1.0_scaffold00033.50 0.9158686078471466 57 AMTR_s00056p00218850 External stimuli response.biotic stress.pathogen effector.NLR effector receptor 0.9153333461325299 58 AMTR_s00045p00076020 RNA biosynthesis.transcriptional activation.SBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00045.66 0.9152743750939987 59 AMTR_s00029p00113670 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC3 promotor-binding component evm_27.TU.AmTr_v1.0_scaffold00029.124 0.9150137175807873 85 AMTR_s00004p00140970 Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.137 0.9149780740178282 62 AMTR_s00056p00172610 Endoribonuclease YBEY, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00056.150 0.9147837881192087 62 AMTR_s00063p00142620 evm_27.TU.AmTr_v1.0_scaffold00063.36 0.9145176984742266 63 AMTR_s00029p00198810 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC3/TTN7 component evm_27.TU.AmTr_v1.0_scaffold00029.275 0.9145137900881345 64 AMTR_s00012p00082490 RNA biosynthesis.RNA polymerase II-dependent transcription.ELONGATOR transcription elongation complex.ELP1 component evm_27.TU.AmTr_v1.0_scaffold00012.37 0.913457928145683 65 AMTR_s00140p00082700 evm_27.TU.AmTr_v1.0_scaffold00140.38 0.9133240055778256 66 AMTR_s00012p00097440 evm_27.TU.AmTr_v1.0_scaffold00012.51 0.9131630263607942 67 AMTR_s01214p00000780 DNA repair endonuclease UVH1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold01214.1 0.91263309616749 70 AMTR_s00155p00053970 WPP domain-associated protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00155.28 0.9124243131369317 71 AMTR_s00003p00052150 evm_27.TU.AmTr_v1.0_scaffold00003.32 0.912170526528378 97 AMTR_s00020p00246930 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol III catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00020.118 0.9121131409284149 73 AMTR_s00177p00048180 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.25 0.9119758725564181 74 AMTR_s00155p00075220 evm_27.TU.AmTr_v1.0_scaffold00155.49 0.9117173831211699 90 AMTR_s00078p00149090 RNA cytidine acetyltransferase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00078.125 0.9115541938409951 76 AMTR_s00106p00107190 evm_27.TU.AmTr_v1.0_scaffold00106.78 0.9108239059738104 94 AMTR_s00028p00237040 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00028.124 0.9105499517275129 79 AMTR_s00190p00029950 Disease resistance protein RPM1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00190.11 0.9103331184883972 80 AMTR_s00126p00036560 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00126.8 0.9096999977626148 82 AMTR_s00045p00168580 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class I/Ez histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00045.200 0.9092878688425603 85 AMTR_s00045p00213360 DNA damage response.DNA repair mechanisms.mismatch repair (MMR).MLH1-PMS1 heterodimer.PMS1 component evm_27.TU.AmTr_v1.0_scaffold00045.296 0.9090693107431912 86 AMTR_s00100p00112150 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS8 CORVET-specific component evm_27.TU.AmTr_v1.0_scaffold00100.35 0.9087511796580195 87 AMTR_s00030p00238130 evm_27.TU.AmTr_v1.0_scaffold00030.204 0.908526612869716 88 AMTR_s00024p00204830 Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.187 0.9083577608155041 89 AMTR_s00155p00036470 evm_27.TU.AmTr_v1.0_scaffold00155.17 0.9081425215811952 91 AMTR_s00148p00056840 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.OST1 component evm_27.TU.AmTr_v1.0_scaffold00148.31 0.9080797196195504 92 AMTR_s00104p00047630 Disease resistance protein RPS2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.12 0.9080668497280405 93 AMTR_s00058p00059520 Solute transport.channels.OSCA calcium-permeable channel evm_27.TU.AmTr_v1.0_scaffold00058.28 0.9075672162105424 95 AMTR_s00046p00164820 Protein modification.acetylation.NatC-type N-terminal acetylase complex.NAA35 auxiliary component evm_27.TU.AmTr_v1.0_scaffold00046.88 0.9070821512301166 97 AMTR_s00004p00110090 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VI kinase families.LRR-VI-1 kinase evm_27.TU.AmTr_v1.0_scaffold00004.89 0.9070231880965001 98 AMTR_s00005p00204930 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SCC1 mitotic-specific Kleisin-type component evm_27.TU.AmTr_v1.0_scaffold00005.82 0.907001841021385 99 AMTR_s00003p00212560 evm_27.TU.AmTr_v1.0_scaffold00003.204 0.906998614726854 100