Sequence Description Alias PCC hrr GSVIVT01017346001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF8/SUS2 protein component 0.9081107224097698 5 GSVIVT01035479001 Cytoskeleton.microfilament network.myosin microfilament-based motor protein activities.class XI myosin 0.8989027693904657 7 GSVIVT01023393001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad54-like group.ATRX chromatin remodeling factor 0.8951355495672039 6 GSVIVT01037513001 Protein modification.phosphorylation.TSL/TOUSLED kinase 0.8869592668785794 4 GSVIVT01015912001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP160 scaffold nucleoporin 0.8845529024759654 13 GSVIVT01012030001 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase 0.8789198686658285 6 GSVIVT01005813001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.ELYS scaffold nucleoporin 0.8774623252572288 7 GSVIVT01036698001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).nuclear basket.NUA nucleoporin 0.8761921685622842 13 GSVIVT01032195001 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.SMC5 component 0.8753864989712624 40 GSVIVT01011157001 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Symplekin/Pta1 component 0.8737008751463642 23 GSVIVT01033327001 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 1 0.8736484646756667 12 GSVIVT01025195001 0.8736110716015635 12 GSVIVT01030051001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.NUP133 scaffold nucleoporin 0.8707869346908512 19 GSVIVT01024075001 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP188 scaffold nucleoporin 0.8696567066428008 50 GSVIVT01035648001 0.8695702960137639 15 GSVIVT01021523001 KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.8685406688748275 16 GSVIVT01035901001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor 0.868414773088053 47 GSVIVT01019950001 0.8678345303066823 18 GSVIVT01036136001 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA3 component 0.8654411762262886 52 GSVIVT01005970001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B3 component 0.8647452312539511 21 GSVIVT01025178001 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor 0.862689140171853 22 GSVIVT01013494001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor 0.8616567768700536 35 GSVIVT01032255001 RNA processing.RNA decay.exosome complex.associated co-factors.Nuclear Exosome Targeting (NEXT) activation complex.MTR4/HEN2 ATP-dependent RNA helicase 0.8612866398144069 99 GSVIVT01029314001 DNA damage response.DNA repair mechanisms.nonhomologous end-joining repair (NHEJ).LIG4-XRCC4 ligase complex.LIG4 DNA ligase component 0.8601761178154532 25 GSVIVT01017686001 0.8600747504472652 26 GSVIVT01025470001 Protein degradation.peptidase families.cysteine-type peptidase activities.Phytocalpain calcium-activated protease 0.859928565833448 48 GSVIVT01008114001 Zinc finger CCCH domain-containing protein 38 OS=Arabidopsis thaliana 0.859555708976678 29 GSVIVT01001079001 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class I ARF-GAP protein 0.8591278145612782 30 GSVIVT01008876001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor 0.8591150809507256 37 GSVIVT01035791001 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor 0.8589478811926097 32 GSVIVT01013976001 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.UTP10 assembly factor 0.8583191820966019 33 GSVIVT01022440001 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.8579899524681792 47 GSVIVT01035415001 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst 0.8573938628309505 35 GSVIVT01024440001 RNA biosynthesis.transcriptional repression.TPL/TPR transcriptional co-repressor 0.8566319570132077 36 GSVIVT01027871001 Splicing factor U2af large subunit A OS=Arabidopsis thaliana 0.8561827850287155 37 GSVIVT01009302001 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40A pre-mRNA-processing protein 0.8553335106036805 38 GSVIVT01003688001 RNA processing.RNA modification.rRNA/tRNA methylation.TRM3 tRNA guanosine-methyltransferase 0.853724620109422 39 GSVIVT01033511001 Protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 OS=Arabidopsis thaliana 0.8528853422713809 45 GSVIVT01024634001 Protein modification.acetylation.NatB-type N-terminal acetylase complex.NAA25 auxiliary component 0.8513861779536733 41 GSVIVT01014219001 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.8512774436052443 42 GSVIVT01026206001 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN2 regulatory component 0.851082624283033 43 GSVIVT01022300001 RNA processing.RNA decay.exosome complex.associated co-factors.Dis3/RRP44 exoribonuclease 0.8505066057492316 45 GSVIVT01011753001 Cell cycle.organelle machineries.DNA replication.genome stability maintenance.RecG-type DNA translocase 0.8503795664713252 46 GSVIVT01032944001 0.8500573759783956 47 GSVIVT01038708001 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component 0.8492945070028625 86 GSVIVT01034254001 0.8488795086308156 49 GSVIVT01013627001 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS3 CORVET-specific component 0.8485209391315096 50 GSVIVT01000696001 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.8482980802743155 51 GSVIVT01001899001 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.8465601803948251 53 GSVIVT01024552001 DEAD-box ATP-dependent RNA helicase 52A OS=Oryza sativa subsp. japonica 0.8459036196205049 54 GSVIVT01020924001 Protein biosynthesis.aminoacyl-tRNA synthetase activities.methionine-tRNA ligase 0.8458421986110992 55 GSVIVT01010632001 Protein biosynthesis.aminoacyl-tRNA synthetase activities.valine-tRNA ligase 0.8458109078024462 56 GSVIVT01019707001 0.8449954676751681 57 GSVIVT01019761001 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor 0.8449411191064573 58 GSVIVT01027630001 0.844853927706491 59 GSVIVT01017770001 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor 0.844568482774955 60 GSVIVT01028893001 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.MTB component 0.8441898642037446 61 GSVIVT01038082001 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.8425065486358989 62 GSVIVT01020301001 Cell cycle.interphase.DNA replication.preinitiation.TOP1 DNA topoisomerase 0.8413876870134944 64 GSVIVT01009725001 Protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial OS=Arabidopsis thaliana 0.8404194743693375 65 GSVIVT01033181001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC3/TTN7 component 0.8397668850196544 67 GSVIVT01032418001 Protein RST1 OS=Arabidopsis thaliana 0.8395246231044985 68 GSVIVT01030267001 Protein translocation.plasmodesmata intercellular trafficking.SIEL regulator protein 0.8392519750798937 69 GSVIVT01035014001 Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii 0.8390122080288835 70 GSVIVT01037396001 Nucleolar complex protein 2 homolog OS=Arabidopsis thaliana 0.8387545356165048 71 GSVIVT01028343001 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component 0.8387479966158806 72 GSVIVT01030782001 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).DNA repair protein (RAD4) 0.8385468026533075 73 GSVIVT01012107001 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase 0.8382123165688721 75 GSVIVT01017791001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Iswi chromatin remodeling factor 0.8375666701471955 76 GSVIVT01001478001 0.8367953889695005 78 GSVIVT01001911001 0.8367764323994599 79 GSVIVT01008639001 RNA biosynthesis.transcriptional activation.B3 superfamily.ARF transcription factor 0.8360224926608459 80 GSVIVT01024104001 0.8346764744557377 82 GSVIVT01031410001 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Rad5/16-like group.Rad5 chromatin remodeling factor 0.8346562053737223 83 GSVIVT01014607001 Pentatricopeptide repeat-containing protein At4g04790, mitochondrial OS=Arabidopsis thaliana 0.8342017692023737 85 GSVIVT01029383001 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.AGO siRNA-integrating factor 0.8341181999379934 86 GSVIVT01000253001 Chromatin organisation.histone modifications.histone deacetylation.histone deacetylase machineries.HDC1/Rxt3 associated component 0.8340112724980274 87 GSVIVT01009251001 RNA processing.RNA splicing.DBR1 intron-lariat-RNA degrading enzyme 0.8335359704067367 88 GSVIVT01012004001 RNA processing.organelle machineries.RNA modification.tRNA adenine deamination.chloroplast-tRNA adenosine deaminase 0.8327924535543488 89 GSVIVT01028157001 DUF724 domain-containing protein 3 OS=Arabidopsis thaliana 0.83279215292001 90 GSVIVT01026995001 0.8327102548570875 91 GSVIVT01020162001 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.VIR regulatory component 0.8324277634678735 92 GSVIVT01003416001 RNA processing.RNA modification.rRNA/tRNA methylation.TRM4 tRNA cytidine-methyltransferase 0.8322983470247157 93 GSVIVT01019359001 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TATA box-binding protein (TBP) regulation.TBP-associated factor (MOT1) 0.8319640325211538 94 GSVIVT01008242001 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase 0.8308353666599064 97 GSVIVT01012726001 tRNA wybutosine-synthesizing protein 2/3/4 OS=Arabidopsis thaliana 0.8301155711371453 99