Sequence Description Alias PCC hrr Cre02.g142700 0.938193582408 3 Cre03.g189605 RNA biosynthesis.RNA polymerase II-dependent transcription.PAF1C transcription initiation and elongation complex.VIP6/CTR9 component 0.926209562266 3 Cre06.g270600 0.917969550735 3 Cre17.g714229 RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor 0.911758666617 4 Cre17.g715850 0.910925762861 28 Cre17.g729250 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component 0.909286445951 7 Cre03.g174500 Homeobox-DDT domain protein RLT1 OS=Arabidopsis thaliana 0.90910892817 30 Cre03.g190550 0.908725518571 25 Cre03.g151550 0.90652371959 11 Cre06.g309050 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component 0.906099479172 18 Cre17.g711457 0.904648704135 51 Cre12.g547450 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.VPS9 RAB5 guanine nucleotide exchange factor 0.903066442157 12 Cre12.g518150 0.902900219345 22 Cre02.g095045 Protein FORGETTER 1 OS=Arabidopsis thaliana 0.902877693574 86 Cre02.g089200 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Chlamydomonas reinhardtii 0.902002695866 15 Cre01.g015050 0.901015544821 94 Cre16.g675950 0.900832636077 33 Cre12.g506650 0.90037160873 54 Cre09.g403182 Chromatin organisation.histone chaperone activities.SPT6-type histone chaperone 0.899412978743 31 Cre11.g478650 0.899021877422 20 Cre06.g293650 0.898228576769 21 Cre09.g396326 0.897888976351 22 Cre14.g618860 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.PIE1 ATPase component 0.896814307335 83 Cre10.g425501 Transcription initiation factor TFIID subunit 1 OS=Oryza sativa subsp. japonica 0.896405546018 68 Cre07.g328550 Vesicle trafficking.target membrane tethering.HOPS/CORVET membrane tethering complexes.VPS18 component 0.896403151916 51 Cre11.g467751 Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase 0.89528048344 26 Cre07.g313500 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).cytoplasmic filaments.NUP214 nucleoporin 0.895099178107 39 Cre12.g526950 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF5 component 0.894629113938 73 Cre06.g308300 0.894306342559 29 Cre05.g247000 0.894050981167 65 Cre01.g007100 0.893844993838 91 Cre07.g349950 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF6 component 0.893657348327 32 Cre14.g628800 Protein degradation.peptidase families.serine-type peptidase activities.subtilisin-type protease families.SBT6.1 protease 0.89345170148 39 Cre04.g222300 0.892898339452 34 Cre10.g443350 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.Syndetin-like EARP-specific component 0.891469606588 35 Cre03.g199750 0.891397631996 39 Cre11.g482483 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI2 RNA helicase component 0.891184823334 37 Cre12.g522850 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica 0.889826384409 38 Cre16.g686650 Protein degradation.peptide tagging.Ubiquitin-fold-modifier (UFM)-anchor addition.UFM ligase E3 protein 0.889730626569 39 Cre04.g225950 0.889224233883 48 Cre06.g251951 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Pfs2/FY component 0.889195647336 56 Cre01.g018200 RNA biosynthesis.transcriptional activation.PHD finger transcription factor 0.889193572568 59 Cre12.g499750 0.888653701624 43 Cre12.g508250 0.888594148032 44 Cre08.g364050 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component 0.88845021313 45 Cre15.g636650 0.887615283444 46 Cre03.g162150 0.887503704525 47 Cre13.g604600 0.887427090887 48 Cre09.g400664 0.88738617411 49 Cre01.g048100 0.887052201918 60 Cre08.g372750 0.886892026666 51 Cre02.g086887 Nuclear pore complex protein NUP98A OS=Arabidopsis thaliana 0.886186274837 52 Cre09.g398650 Cactin OS=Arabidopsis thaliana 0.886166820361 53 Cre01.g053360 0.885552874732 55 Cre08.g359450 0.884664344849 56 Cre14.g633650 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U5 small nuclear ribonucleoprotein particle (snRNP).PRPF6/PRP1/STA1 protein component 0.883621580882 57 Cre07.g352600 Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3 OS=Chlamydomonas reinhardtii 0.883278965906 58 Cre09.g390319 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase guanyl-nucleotide exchange factor (ARF-GEF) activities.BIG-type ARF-GEF factor 0.883002092788 59 Cre04.g223900 0.882258219684 60 Cre06.g310000 Vesicle trafficking.endomembrane trafficking.vacuolar sorting.AP-4 vacuole cargo adaptor complex.AP4E large epsilon subunit 0.882208323893 61 Cre01.g051100 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.SKIP/MAC6 component 0.88209645337 70 Cre12.g492200 RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.PHD transcription factor 0.88114171149 75 Cre16.g662800 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF4 snRNP component 0.88102760729 64 Cre04.g220600 0.880621747521 74 Cre01.g030450 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease 0.880524997071 69 Cre16.g691050 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana 0.879614923906 96 Cre01.g048900 0.879405535908 69 Cre16.g692400 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.MRG histone H3K4/H3K36 methylation reader 0.879202200859 70 Cre07.g326300 Vesicle trafficking.target membrane tethering.DSL1 (Depends-on-SLY1) complex.MIP1 component 0.878551406462 72 Cre16.g682750 0.877904464517 74 Cre03.g176400 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 112.2) & Serine/threonine-protein kinase STY17 OS=Arabidopsis thaliana 0.87760531918 76 Cre04.g228500 0.877466874739 80 Cre09.g394880 0.877241425825 78 Cre10.g464950 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.TFC4/Tau131 component 0.876762614093 79 Cre12.g493000 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) 0.876227876375 80 Cre17.g741550 0.875624144164 81 Cre14.g632950 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT1 component 0.875350368923 82 Cre08.g378500 0.875093020795 83 Cre06.g278197 Probable ubiquitin-like-specific protease 2B OS=Arabidopsis thaliana 0.875072041787 84 Cre09.g403300 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.TFB2-type subunit 0.87388300478 86 Cre17.g700500 0.873681366999 87 Cre12.g515250 Protein TRANSPARENT TESTA 9 OS=Arabidopsis thaliana 0.873439095375 88 Cre11.g481900 0.873403772566 89 Cre11.g467639 0.873208722604 91 Cre10.g459700 0.872744953652 95 Cre09.g413650 0.872339238613 97