Sequence Description Alias PCC hrr AMTR_s00081p00063880 Protein modification.phosphorylation.AGC kinase superfamily.AGC-VIII kinase evm_27.TU.AmTr_v1.0_scaffold00081.20 0.9476511057216401 1 AMTR_s00010p00265990 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.PnsL2/PQL1 component evm_27.TU.AmTr_v1.0_scaffold00010.518 0.9339632209034094 5 AMTR_s00065p00210500 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.subcomplex B.PnsB1/NDF1 component evm_27.TU.AmTr_v1.0_scaffold00065.208 0.9245619662627692 12 AMTR_s00025p00126870 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb32 protein evm_27.TU.AmTr_v1.0_scaffold00025.118 0.9219953373349479 32 AMTR_s00016p00108610 Photosynthesis.photophosphorylation.linear electron flow.ferredoxin-NADP reductase (FNR) activity.ferredoxin-NADP oxidoreductase evm_27.TU.AmTr_v1.0_scaffold00016.69 0.9194220237453119 50 AMTR_s00058p00182650 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor evm_27.TU.AmTr_v1.0_scaffold00058.174 0.9168474673230484 18 AMTR_s00079p00061090 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo dimer.small subunit evm_27.TU.AmTr_v1.0_scaffold00079.19 0.9122037515804462 36 AMTR_s00060p00116070 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamine synthetase evm_27.TU.AmTr_v1.0_scaffold00060.55 0.9115473093715736 22 AMTR_s00046p00219150 Photosynthesis.photorespiration.serine hydroxymethyltransferase evm_27.TU.AmTr_v1.0_scaffold00046.151 0.9086160878178917 10 AMTR_s00046p00146170 evm_27.TU.AmTr_v1.0_scaffold00046.79 0.9068177224145352 52 AMTR_s00001p00191890 Photosynthesis.photophosphorylation.cyclic electron flow.PGR5/PGRL1 complex.PGRL1-like component evm_27.TU.AmTr_v1.0_scaffold00001.191 0.9035258594620342 40 AMTR_s00029p00239610 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb4-type component evm_27.TU.AmTr_v1.0_scaffold00029.405 0.9031767073666814 53 AMTR_s00012p00257120 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.regulatory co-factors.TAC16 component evm_27.TU.AmTr_v1.0_scaffold00012.301 0.9030109914476218 71 AMTR_s00088p00153020 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb1/2/3-type component evm_27.TU.AmTr_v1.0_scaffold00088.122 0.9022322939117713 38 AMTR_s00025p00041760 Carbohydrate metabolism.starch metabolism.synthesis.ADP-glucose pyrophosphorylase evm_27.TU.AmTr_v1.0_scaffold00025.20 0.9021686911949529 38 AMTR_s00025p00156240 RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor evm_27.TU.AmTr_v1.0_scaffold00025.176 0.9015580103350159 16 AMTR_s00049p00052690 Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll metabolism.magnesium-chelatase complex.GUN4 cofactor evm_27.TU.AmTr_v1.0_scaffold00049.26 0.9011118648940967 21 AMTR_s00061p00065790 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaG evm_27.TU.AmTr_v1.0_scaffold00061.40 0.900012844881489 42 AMTR_s00062p00189550 Cellular respiration.glycolysis.plastidial glycolysis.phosphoglycerate kinase evm_27.TU.AmTr_v1.0_scaffold00062.192 0.89873021643434 60 AMTR_s00054p00125650 Protein biosynthesis.organelle translation machineries.plastidial ribosome.large subunit proteome.psRPL21 component evm_27.TU.AmTr_v1.0_scaffold00054.40 0.8965154302387848 37 AMTR_s00010p00264770 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.LHCa4-type component evm_27.TU.AmTr_v1.0_scaffold00010.505 0.8961771570646858 40 AMTR_s00024p00220440 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.electron donor-binding subcomplex E.NdhU component evm_27.TU.AmTr_v1.0_scaffold00024.215 0.8947357308568582 28 AMTR_s00049p00157390 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbY evm_27.TU.AmTr_v1.0_scaffold00049.142 0.8943184414179228 62 AMTR_s00103p00041210 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaD evm_27.TU.AmTr_v1.0_scaffold00103.18 0.8923697598638467 48 AMTR_s00048p00229560 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.TPT phosphometabolite transporter evm_27.TU.AmTr_v1.0_scaffold00048.224 0.8917582093356394 26 AMTR_s00099p00139960 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb5-type component evm_27.TU.AmTr_v1.0_scaffold00099.124 0.8917142754057734 53 AMTR_s00016p00251680 Photosynthesis.calvin cycle.glyceraldehyde 3-phosphate dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00016.302 0.8887064438321989 66 AMTR_s00099p00163300 RNA biosynthesis.transcriptional activation.NAC transcription factor evm_27.TU.AmTr_v1.0_scaffold00099.164 0.8877812661591038 52 AMTR_s00012p00254690 Protein modification.phosphorylation.TKL kinase superfamily.L-lectin kinase evm_27.TU.AmTr_v1.0_scaffold00012.280 0.8841785441536146 31 AMTR_s00098p00157610 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.Viridiplantae-specific components.OEC16 component PsbQ evm_27.TU.AmTr_v1.0_scaffold00098.46 0.8830011403146031 67 AMTR_s00007p00263960 Redox homeostasis.chloroplast redox homeostasis.2-Cys peroxiredoxin activities.atypical 2-Cys peroxiredoxin (PrxQ) evm_27.TU.AmTr_v1.0_scaffold00007.343 0.8829538785130624 59 AMTR_s00152p00085890 Photosynthesis.photorespiration.hydroxypyruvate reductase evm_27.TU.AmTr_v1.0_scaffold00152.29 0.8828115605375177 86 AMTR_s00001p00142570 Photosynthesis.photophosphorylation.Cytb6/f to PS-I electron carriers.plastocyanin evm_27.TU.AmTr_v1.0_scaffold00001.122 0.8818872811851606 60 AMTR_s00093p00107560 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR3 evm_27.TU.AmTr_v1.0_scaffold00093.37 0.88108075903034 65 AMTR_s00092p00018230 Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.4 0.8805315457931777 75 AMTR_s00059p00176390 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.OEC33 component PsbO evm_27.TU.AmTr_v1.0_scaffold00059.181 0.8788505375523316 84 AMTR_s00096p00053280 evm_27.TU.AmTr_v1.0_scaffold00096.21 0.8774934463307178 39 AMTR_s00098p00154060 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.lumen subcomplex L.PnsL3/PQL2 component evm_27.TU.AmTr_v1.0_scaffold00098.43 0.8765057605231921 88 AMTR_s00018p00255680 Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00018.171 0.873602666739792 41 AMTR_s00009p00268360 Photosynthesis.photophosphorylation.photosystem II.LHC-II complex.LHCb6-type component evm_27.TU.AmTr_v1.0_scaffold00009.423 0.8701209323343349 66 AMTR_s00071p00016000 Redox homeostasis.chloroplast redox homeostasis.M-type thioredoxin evm_27.TU.AmTr_v1.0_scaffold00071.5 0.8678862019174565 91 AMTR_s00061p00059490 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.LHCa3-type component evm_27.TU.AmTr_v1.0_scaffold00061.34 0.8678473248588943 86 AMTR_s00048p00138890 Photosynthesis.calvin cycle.phosphoribulokinase evm_27.TU.AmTr_v1.0_scaffold00048.87 0.8674445155175485 81 AMTR_s00024p00218080 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbX evm_27.TU.AmTr_v1.0_scaffold00024.208 0.8666309152443114 69 AMTR_s00106p00039260 Carbohydrate metabolism.mannose metabolism.phosphomannomutase evm_27.TU.AmTr_v1.0_scaffold00106.20 0.866447270917563 49 AMTR_s00109p00047950 Solute transport.carrier-mediated transport.TOC superfamily.TSUP transport protein evm_27.TU.AmTr_v1.0_scaffold00109.34 0.8661037410128921 51 AMTR_s00067p00081240 Pentatricopeptide repeat-containing protein At4g35130, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00067.57 0.8639601368589325 55 AMTR_s00092p00098850 RNA biosynthesis.organelle machineries.transcription.mTERF transcription factor evm_27.TU.AmTr_v1.0_scaffold00092.56 0.8637308715850194 55 AMTR_s00101p00121540 PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.95 0.861943293100162 94 AMTR_s00115p00066030 Photosynthesis.photophosphorylation.chlororespiration.NADH dehydrogenase-like (NDH) complex.assembly and stabilization.protein factor CRR41 evm_27.TU.AmTr_v1.0_scaffold00115.4 0.8608648288803192 58 AMTR_s00068p00047550 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).FLAP1 NPQ-regulator protein evm_27.TU.AmTr_v1.0_scaffold00068.17 0.8604864087153474 71 AMTR_s00017p00154940 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).PsbS-dependent machinery.PsbS protein evm_27.TU.AmTr_v1.0_scaffold00017.71 0.857338773253216 63 AMTR_s00007p00081670 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.oxygen-evolving center (OEC) extrinsic proteins.Viridiplantae-specific components.OEC23 component PsbP evm_27.TU.AmTr_v1.0_scaffold00007.46 0.8569601440663712 91 AMTR_s00040p00174700 Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00040.163 0.8562977514162383 67 AMTR_s00007p00193800 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaK evm_27.TU.AmTr_v1.0_scaffold00007.164 0.855432281486661 79 AMTR_s00092p00167540 Enzyme classification.EC_6 ligases.EC_6.6 ligase forming nitrogen-metal bond evm_27.TU.AmTr_v1.0_scaffold00092.149 0.8551635095108853 99 AMTR_s00002p00271180 Carbohydrate metabolism.oxidative pentose phosphate pathway.non-oxidative phase.ribose 5-phosphate isomerase evm_27.TU.AmTr_v1.0_scaffold00002.613 0.8550955746561751 70 AMTR_s00209p00025500 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaN evm_27.TU.AmTr_v1.0_scaffold00209.5 0.8541654448063528 73 AMTR_s00037p00168570 Photosynthesis.photophosphorylation.ATP synthase complex.peripheral CF1 subcomplex.subunit gamma evm_27.TU.AmTr_v1.0_scaffold00037.79 0.853334817491453 75 AMTR_s00002p00266120 Photosynthesis.photophosphorylation.photosystem II.PS-II complex.component PsbW evm_27.TU.AmTr_v1.0_scaffold00002.505 0.8526607763831019 76 AMTR_s00095p00031150 Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.12 0.8501893963786666 78 AMTR_s00019p00244740 Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.373 0.849045299994903 80 AMTR_s00058p00191040 Carbonic anhydrase, chloroplastic OS=Spinacia oleracea evm_27.TU.AmTr_v1.0_scaffold00058.190 0.8468916418839084 82 AMTR_s00032p00227150 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor evm_27.TU.AmTr_v1.0_scaffold00032.244 0.8454348971608278 83 AMTR_s00032p00144550 Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaF evm_27.TU.AmTr_v1.0_scaffold00032.106 0.8453880361591011 84 AMTR_s00006p00250270 Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00006.149 0.8448054174381825 85 AMTR_s00175p00040360 Photosynthesis.photophosphorylation.photosystem I.LHC-I complex.LHCa1-type component evm_27.TU.AmTr_v1.0_scaffold00175.14 0.8447045460415118 90 AMTR_s00022p00242510 Thylakoid lumenal 19 kDa protein, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.352 0.8423397069411948 91 AMTR_s00058p00051650 evm_27.TU.AmTr_v1.0_scaffold00058.23 0.8420634849696934 92 AMTR_s00099p00029990 Photosynthesis.photophosphorylation.photosystem II.assembly and maintenance.Psb33 protein evm_27.TU.AmTr_v1.0_scaffold00099.15 0.8406506575644495 94 AMTR_s00109p00109760 Malonate--CoA ligase OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.104 0.8400113815353895 96 AMTR_s00063p00191490 Nutrient uptake.nitrogen assimilation.ammonium assimilation.glutamate synthase activities.Fd-dependent glutamate synthase evm_27.TU.AmTr_v1.0_scaffold00063.73 0.8399502954900245 97 AMTR_s00033p00240030 L-type lectin-domain containing receptor kinase IX.2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00033.255 0.8389568203703589 98