Sequence Description Alias PCC hrr AMTR_s00131p00040500 Small RNA degrading nuclease 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00131.25 0.920286384882255 34 AMTR_s00099p00018620 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component evm_27.TU.AmTr_v1.0_scaffold00099.5 0.913375307850684 24 AMTR_s00102p00095780 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-2 cargo adaptor complex.AP1/2B large beta subunit evm_27.TU.AmTr_v1.0_scaffold00102.50 0.9065863283108847 49 AMTR_s00036p00239020 Chromatin organisation.histone modifications.histone arginine methylation.PRMT1 histone methylase evm_27.TU.AmTr_v1.0_scaffold00036.188 0.9015789034449277 24 AMTR_s00012p00097440 evm_27.TU.AmTr_v1.0_scaffold00012.51 0.8993095152266644 16 AMTR_s00088p00170220 FRIGIDA-like protein 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00088.145 0.896890443398292 6 AMTR_s00119p00124540 Protein translocation.mitochondrion.outer mitochondrion membrane TOM translocation system.Tom40 component evm_27.TU.AmTr_v1.0_scaffold00119.97 0.8968320897272497 17 AMTR_s00057p00039750 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKD/CDK7 kinase evm_27.TU.AmTr_v1.0_scaffold00057.19 0.8963783573940513 42 AMTR_s00001p00249260 evm_27.TU.AmTr_v1.0_scaffold00001.310 0.8948884514255692 45 AMTR_s00046p00229090 evm_27.TU.AmTr_v1.0_scaffold00046.172 0.8946880558080977 39 AMTR_s00001p00094700 Protein degradation.peptidase families.metallopeptidase activities.M48 families.STE24 zinc metalloprotease evm_27.TU.AmTr_v1.0_scaffold00001.65 0.8929742812524772 11 AMTR_s00031p00234160 Vesicle trafficking.endomembrane trafficking.protein recycling.ubiquitylated cargo adaptors.TOM associated protein evm_27.TU.AmTr_v1.0_scaffold00031.112 0.8921636039385544 30 AMTR_s00059p00150840 COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00059.137 0.8890407573424859 82 AMTR_s00148p00070260 Pentatricopeptide repeat-containing protein At2g37230 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00148.44 0.8885589631235603 36 AMTR_s00007p00259060 Suppressor of mec-8 and unc-52 protein homolog 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.316 0.8884773016991896 89 AMTR_s00007p00105480 Protein modification.phosphorylation.CAMK kinase superfamily.CDPK kinase evm_27.TU.AmTr_v1.0_scaffold00007.63 0.8875495109637367 16 AMTR_s00016p00227740 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.RTR Holliday junction dissolution complex.RMI1 non-catalytic component evm_27.TU.AmTr_v1.0_scaffold00016.214 0.8857451172559144 25 AMTR_s00061p00067260 High mobility group B protein 15 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.42 0.885614978887648 91 AMTR_s00007p00252500 Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00007.289 0.8843924118602037 20 AMTR_s00019p00255470 Protein biosynthesis.translation elongation.eEF1B eEF1A-GDP-recycling complex.eEF1B-gamma component evm_27.TU.AmTr_v1.0_scaffold00019.442 0.8837827863476927 69 AMTR_s00010p00265700 RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00010.513 0.8837627429008277 22 AMTR_s00041p00081370 evm_27.TU.AmTr_v1.0_scaffold00041.48 0.8810939710853127 26 AMTR_s00030p00238130 evm_27.TU.AmTr_v1.0_scaffold00030.204 0.8807743985976112 34 AMTR_s00009p00258110 DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00009.299 0.8806139467173248 28 AMTR_s00004p00029120 evm_27.TU.AmTr_v1.0_scaffold00004.12 0.8805512334093238 34 AMTR_s00057p00214920 evm_27.TU.AmTr_v1.0_scaffold00057.271 0.8794733481301775 32 AMTR_s00091p00037050 Protein modification.phosphorylation.AGC kinase superfamily.MAST kinase evm_27.TU.AmTr_v1.0_scaffold00091.6 0.8790630220735415 75 AMTR_s00002p00225030 DEAD-box ATP-dependent RNA helicase 27 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00002.247 0.8787218388277592 34 AMTR_s00027p00217440 evm_27.TU.AmTr_v1.0_scaffold00027.80 0.8786227656568836 100 AMTR_s00014p00250090 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit evm_27.TU.AmTr_v1.0_scaffold00014.130 0.8776522463797534 69 AMTR_s00101p00134540 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp4 assembly factor evm_27.TU.AmTr_v1.0_scaffold00101.112 0.8774367212104336 78 AMTR_s00103p00063820 Protein AUXIN RESPONSE 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00103.32 0.8766072405395994 38 AMTR_s00009p00218530 Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.small subunit proteome.mtRPS9 component evm_27.TU.AmTr_v1.0_scaffold00009.156 0.8765340679330847 40 AMTR_s00006p00083160 evm_27.TU.AmTr_v1.0_scaffold00006.30 0.876242761617551 42 AMTR_s00110p00066820 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.beta subunit evm_27.TU.AmTr_v1.0_scaffold00110.31 0.8755585824007108 42 AMTR_s00093p00085820 Protein MEI2-like 2 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00093.23 0.8741532543456855 44 AMTR_s00021p00206430 evm_27.TU.AmTr_v1.0_scaffold00021.176 0.873662381233365 46 AMTR_s00066p00145760 evm_27.TU.AmTr_v1.0_scaffold00066.147 0.8723267818393441 94 AMTR_s00001p00273100 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00001.594 0.8722829873100977 51 AMTR_s00045p00182070 DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00045.224 0.8717946756625035 52 AMTR_s00033p00179610 evm_27.TU.AmTr_v1.0_scaffold00033.131 0.8706667297357075 56 AMTR_s00082p00169320 RNA biosynthesis.transcriptional activation.GeBP transcription factor evm_27.TU.AmTr_v1.0_scaffold00082.40 0.8703821370360098 55 AMTR_s00022p00147990 Cell wall.pectin.rhamnogalacturonan II.synthesis.2-keto-3-deoxymanno-octulosonic acid (KDO) synthesis.CMP-KDO synthetase evm_27.TU.AmTr_v1.0_scaffold00022.144 0.8700181524049047 60 AMTR_s00029p00224040 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component evm_27.TU.AmTr_v1.0_scaffold00029.346 0.8693712345620028 65 AMTR_s00092p00100450 Coenzyme metabolism.prenylquinone synthesis.plastoquinone synthesis.SPS3 solanesyl diphosphate synthase evm_27.TU.AmTr_v1.0_scaffold00092.58 0.8684730047341315 77 AMTR_s00014p00247240 evm_27.TU.AmTr_v1.0_scaffold00014.121 0.8677752657350536 63 AMTR_s00028p00234070 Vesicle trafficking.endomembrane trafficking.PI3-kinase vesicle nucleation complex I/II.VPS34/PI3K phosphatidylinositol 3-kinase component evm_27.TU.AmTr_v1.0_scaffold00028.115 0.8673721233734287 89 AMTR_s00129p00037970 RNA biosynthesis.rRNA biogenesis.APUM23 factor evm_27.TU.AmTr_v1.0_scaffold00129.17 0.8673285929094385 66 AMTR_s00016p00110380 evm_27.TU.AmTr_v1.0_scaffold00016.72 0.8672160092393286 67 AMTR_s00007p00085450 Protein modification.phosphorylation.CMGC kinase superfamily.DYRK kinase evm_27.TU.AmTr_v1.0_scaffold00007.50 0.8662107224280203 71 AMTR_s00095p00139840 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00095.102 0.8661267241105655 72 AMTR_s00002p00267210 evm_27.TU.AmTr_v1.0_scaffold00002.521 0.8658147757939262 74 AMTR_s00058p00175640 Protein modification.lipidation.Cys-linked prenylation.type-I protein prenyltransferase complex.subunit beta evm_27.TU.AmTr_v1.0_scaffold00058.165 0.8655813638209615 77 AMTR_s00110p00064100 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.NOB1 endonuclease evm_27.TU.AmTr_v1.0_scaffold00110.28 0.8652877062907903 82 AMTR_s00111p00111440 evm_27.TU.AmTr_v1.0_scaffold00111.85 0.8635251532864641 86 AMTR_s00023p00113610 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).U2B snRNP component evm_27.TU.AmTr_v1.0_scaffold00023.58 0.86241964893827 80 AMTR_s00095p00027730 Pentatricopeptide repeat-containing protein At1g80270, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00095.8 0.8603047949495511 87 AMTR_s00019p00256050 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3c component evm_27.TU.AmTr_v1.0_scaffold00019.448 0.8602784948107313 90 AMTR_s00156p00017490 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.VPS9 RAB5 guanine nucleotide exchange factor evm_27.TU.AmTr_v1.0_scaffold00156.4 0.8591542995737621 98 AMTR_s00099p00079780 Calcineurin B-like protein 3 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00099.59 0.8589826357068442 99 AMTR_s00016p00196390 evm_27.TU.AmTr_v1.0_scaffold00016.161 0.8579064529368252 100