Sequence Description Alias PCC hrr AMTR_s00009p00184050 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) evm_27.TU.AmTr_v1.0_scaffold00009.114 0.9357601853452058 17 AMTR_s00011p00229900 evm_27.TU.AmTr_v1.0_scaffold00011.109 0.9350575758616088 10 AMTR_s00010p00163020 DNA damage response.DNA repair mechanisms.nucleotide excision repair (NER).DNA repair protein (RAD4) evm_27.TU.AmTr_v1.0_scaffold00010.125 0.93393011249968 3 AMTR_s00029p00058110 RNA biosynthesis.transcriptional activation.JUMONJI transcription factor evm_27.TU.AmTr_v1.0_scaffold00029.52 0.9311060800818559 6 AMTR_s00087p00144100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00087.47 0.9279243124903467 26 AMTR_s00029p00198530 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC3/TTN7 component evm_27.TU.AmTr_v1.0_scaffold00029.274 0.9278329405072495 26 AMTR_s00122p00126300 evm_27.TU.AmTr_v1.0_scaffold00122.63 0.9266425392923909 7 AMTR_s00016p00106660 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase evm_27.TU.AmTr_v1.0_scaffold00016.68 0.9263484847178229 8 AMTR_s00086p00165640 Chromatin organisation.chromatin remodeling complexes.ATPase core components.Snf2-like group.Chd3/Mi-2 chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00086.104 0.9251204828726258 59 AMTR_s00109p00056900 La protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.42 0.9237203142197988 10 AMTR_s00009p00247750 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component evm_27.TU.AmTr_v1.0_scaffold00009.244 0.9232998952488353 89 AMTR_s00021p00172560 Apoptosis inhibitor 5-like protein API5 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00021.126 0.9229674407639302 46 AMTR_s00071p00058700 CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00071.33 0.9215706416404866 52 AMTR_s00002p00269010 evm_27.TU.AmTr_v1.0_scaffold00002.545 0.9205410744894624 41 AMTR_s00047p00208850 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.SMC1/TTN8 component evm_27.TU.AmTr_v1.0_scaffold00047.148 0.9203615500294781 15 AMTR_s00065p00174980 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00065.145 0.9201472670535518 30 AMTR_s00020p00234520 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00020.106 0.9197130043728511 56 AMTR_s00004p00133120 Protein modification.phosphorylation.TSL/TOUSLED kinase evm_27.TU.AmTr_v1.0_scaffold00004.128 0.9181162675988885 18 AMTR_s00110p00073830 RNA processing.RNA splicing.spliceosome assembly/disassembly.RNA helicase activities.Prp2 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00110.39 0.9166322488167435 60 AMTR_s00040p00136460 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ deconjugation.OTU-type protease evm_27.TU.AmTr_v1.0_scaffold00040.105 0.9164573925395445 21 AMTR_s00068p00177220 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDK9 kinase evm_27.TU.AmTr_v1.0_scaffold00068.133 0.915831670609008 28 AMTR_s00003p00052150 evm_27.TU.AmTr_v1.0_scaffold00003.32 0.9152143780570525 78 AMTR_s00092p00123760 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS53/HIT1 component evm_27.TU.AmTr_v1.0_scaffold00092.88 0.9146686548456234 64 AMTR_s00032p00104970 DExH-box ATP-dependent RNA helicase DExH6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00032.66 0.9138636779906735 25 AMTR_s00041p00123630 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component evm_27.TU.AmTr_v1.0_scaffold00041.92 0.9120159765389964 30 AMTR_s00119p00089670 Vesicle trafficking.target membrane tethering.Golgi membrane tethering factors.GC6-type golgin evm_27.TU.AmTr_v1.0_scaffold00119.69 0.9118497892762558 75 AMTR_s00039p00209870 Protein CHROMATIN REMODELING 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00039.178 0.9116319900059903 28 AMTR_s00011p00222440 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.CCV accessory factors.AUL clathrin uncoating protein evm_27.TU.AmTr_v1.0_scaffold00011.98 0.9112012514363801 29 AMTR_s00004p00121730 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.107 0.9099483071376778 31 AMTR_s00044p00137040 Solute transport.channels.GLR ligand-gated cation channel evm_27.TU.AmTr_v1.0_scaffold00044.128 0.9088458743318418 34 AMTR_s00061p00167160 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIf basal transcription factor complex.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00061.171 0.9085793543931225 33 AMTR_s00012p00217710 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00012.161 0.9084137957666113 80 AMTR_s00012p00234420 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.CRN/MAC10 component evm_27.TU.AmTr_v1.0_scaffold00012.192 0.9072268660668227 72 AMTR_s00111p00041460 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3a component evm_27.TU.AmTr_v1.0_scaffold00111.21 0.9066610282951115 40 AMTR_s00164p00059220 Vesicle trafficking.endomembrane trafficking.vacuolar sorting.VSR vacuolar sorting receptor evm_27.TU.AmTr_v1.0_scaffold00164.25 0.9063661716147549 40 AMTR_s00104p00047720 Probable disease resistance protein At1g61180 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00104.13 0.9058711765727658 50 AMTR_s00063p00142620 evm_27.TU.AmTr_v1.0_scaffold00063.36 0.9047640098572528 77 AMTR_s00060p00141700 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF73-II/FEG component evm_27.TU.AmTr_v1.0_scaffold00060.84 0.9047191118335896 45 AMTR_s00131p00018630 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component evm_27.TU.AmTr_v1.0_scaffold00131.4 0.9029253013046638 46 AMTR_s00003p00212560 evm_27.TU.AmTr_v1.0_scaffold00003.204 0.9020495059465619 90 AMTR_s00036p00067000 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00036.22 0.9005451510198933 52 AMTR_s00061p00196410 Enzyme classification.EC_6 ligases.EC_6.2 ligase forming carbon-sulfur bond evm_27.TU.AmTr_v1.0_scaffold00061.230 0.9004279297051071 66 AMTR_s00029p00248990 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.SF3B2 component evm_27.TU.AmTr_v1.0_scaffold00029.453 0.9001433565641433 58 AMTR_s00022p00245030 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I catalytic subunits.subunit 1 evm_27.TU.AmTr_v1.0_scaffold00022.362 0.9001340785832344 59 AMTR_s00010p00227470 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).PRP40A pre-mRNA-processing protein evm_27.TU.AmTr_v1.0_scaffold00010.255 0.8997801918882787 61 AMTR_s00077p00055540 MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.32 0.8991422497838627 63 AMTR_s00025p00038580 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.XPD-type subunit evm_27.TU.AmTr_v1.0_scaffold00025.17 0.8977551636286671 89 AMTR_s00179p00033790 evm_27.TU.AmTr_v1.0_scaffold00179.7 0.8974690870007945 85 AMTR_s00029p00211750 RNA processing.organelle machineries.RNA modification.tRNA adenine deamination.chloroplast-tRNA adenosine deaminase evm_27.TU.AmTr_v1.0_scaffold00029.309 0.8968129785814054 70 AMTR_s00001p00249260 evm_27.TU.AmTr_v1.0_scaffold00001.310 0.8931590514660404 74 AMTR_s00027p00223150 evm_27.TU.AmTr_v1.0_scaffold00027.94 0.8924854993756534 77 AMTR_s00140p00082700 evm_27.TU.AmTr_v1.0_scaffold00140.38 0.8919628580822679 80 AMTR_s00021p00207790 evm_27.TU.AmTr_v1.0_scaffold00021.180 0.8916941367995213 83 AMTR_s00022p00242580 Cytoskeleton.microtubular network.microtubule Tubulin heterodimer formation.gamma-Tubulin ring complex (gamma-TuRC).Augmin gamma-TuRC recruiting complex.AUG5 component evm_27.TU.AmTr_v1.0_scaffold00022.353 0.8915729685533431 84 AMTR_s00030p00120950 PH, RCC1 and FYVE domains-containing protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00030.69 0.8910616794894303 86 AMTR_s00062p00101520 Cytoskeleton.microtubular network.microtubule dynamics.SPR2 microtubule-stabilizing factor evm_27.TU.AmTr_v1.0_scaffold00062.74 0.8897952930416753 94 AMTR_s00055p00198590 Protein modification.phosphorylation.STE kinase superfamily.MAP4K kinase evm_27.TU.AmTr_v1.0_scaffold00055.138 0.8895992923574259 96 AMTR_s00044p00129280 RNA processing.RNA decay.exosome complex.associated co-factors.Dis3/RRP44 exoribonuclease evm_27.TU.AmTr_v1.0_scaffold00044.117 0.8893621355098781 98