Sequence Description Alias PCC hrr AMTR_s00020p00233960 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.BET3 component evm_27.TU.AmTr_v1.0_scaffold00020.105 0.9249325260559575 1 AMTR_s00131p00040500 Small RNA degrading nuclease 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00131.25 0.9128207580750587 60 AMTR_s00059p00212210 evm_27.TU.AmTr_v1.0_scaffold00059.248 0.9086034496754329 33 AMTR_s00004p00166400 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00004.183 0.9075692078490631 18 AMTR_s00033p00216030 evm_27.TU.AmTr_v1.0_scaffold00033.190 0.9044222259235984 5 AMTR_s00101p00113170 Protein DGS1, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.87 0.9003053898534384 6 AMTR_s00057p00218370 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG4 ATG8-maturation peptidase evm_27.TU.AmTr_v1.0_scaffold00057.280 0.8991058843760148 7 AMTR_s00057p00039750 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKD/CDK7 kinase evm_27.TU.AmTr_v1.0_scaffold00057.19 0.894294919248838 52 AMTR_s00146p00075190 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase complex.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00146.43 0.893415699261466 9 AMTR_s00067p00205070 Protein translocation.peroxisome.importomer translocation system.receptor monoubiquitination system.Pex12 component evm_27.TU.AmTr_v1.0_scaffold00067.225 0.8923112126261702 32 AMTR_s00027p00217440 evm_27.TU.AmTr_v1.0_scaffold00027.80 0.8906348381112614 50 AMTR_s00025p00141470 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.TRS31 component evm_27.TU.AmTr_v1.0_scaffold00025.151 0.8904062085570718 12 AMTR_s00047p00229860 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3m component evm_27.TU.AmTr_v1.0_scaffold00047.196 0.8899390570320949 16 AMTR_s00111p00088150 evm_27.TU.AmTr_v1.0_scaffold00111.58 0.8892041218170821 47 AMTR_s00056p00180950 Protein modification.peptide maturation.mitochondrion.MPP mitochondrial signal peptidase heterodimer.alpha subunit evm_27.TU.AmTr_v1.0_scaffold00056.160 0.8862090703644039 27 AMTR_s00119p00125710 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).core components.MOS4 component evm_27.TU.AmTr_v1.0_scaffold00119.98 0.8860332959197915 52 AMTR_s00123p00060730 Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A phosphatase complexes.B1-type regulatory component evm_27.TU.AmTr_v1.0_scaffold00123.4 0.8847768605221795 17 AMTR_s00012p00138230 Protein modification.phosphorylation.CMGC kinase superfamily.cyclin-dependent kinase families.CDKA kinase evm_27.TU.AmTr_v1.0_scaffold00012.71 0.8809915187638256 29 AMTR_s00170p00040980 Cellular respiration.pyruvate oxidation.mitochondrial pyruvate dehydrogenase complex.E2 component evm_27.TU.AmTr_v1.0_scaffold00170.18 0.8788759706481584 55 AMTR_s00049p00212710 Ribosomal RNA-processing protein 8 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.244 0.8770053038408725 38 AMTR_s00009p00218020 RNA processing.RNA modification.rRNA/tRNA methylation.C/D small nucleolar ribonucleoprotein (snoRNP) rRNA methylation complex.Nop1/fibrillarin methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00009.155 0.8736128048505174 34 AMTR_s00009p00252980 Protein modification.phosphorylation.TKL kinase superfamily.RLCK-XII kinase evm_27.TU.AmTr_v1.0_scaffold00009.265 0.8734181793552562 24 AMTR_s00142p00069520 Nudix hydrolase 20, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00142.39 0.872248202030512 39 AMTR_s00022p00147330 Chromatin organisation.chromatin remodeling complexes.additional core components.BAF255/170 component evm_27.TU.AmTr_v1.0_scaffold00022.143 0.8712708439482162 27 AMTR_s00023p00059770 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.SNX2 component evm_27.TU.AmTr_v1.0_scaffold00023.27 0.8688475586441105 29 AMTR_s00110p00050600 Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00110.22 0.8687152291172971 30 AMTR_s00078p00027610 evm_27.TU.AmTr_v1.0_scaffold00078.8 0.8686295337755157 31 AMTR_s00171p00058490 evm_27.TU.AmTr_v1.0_scaffold00171.41 0.8670983192671303 33 AMTR_s00092p00100450 Coenzyme metabolism.prenylquinone synthesis.plastoquinone synthesis.SPS3 solanesyl diphosphate synthase evm_27.TU.AmTr_v1.0_scaffold00092.58 0.8669375912012094 84 AMTR_s00065p00117290 evm_27.TU.AmTr_v1.0_scaffold00065.69 0.8664463333498954 35 AMTR_s00101p00070200 DNA damage response.DNA repair mechanisms.homologous recombination repair (HR).Smc5-Smc6 complex.NSE1 ubiquitin ligase component evm_27.TU.AmTr_v1.0_scaffold00101.44 0.8660664726943047 36 AMTR_s00001p00273100 Protein modification.protein folding and quality control.protein folding catalyst activities.Cyclophilin protein folding catalyst evm_27.TU.AmTr_v1.0_scaffold00001.594 0.8637109879322215 48 AMTR_s00025p00100140 RNA biosynthesis.transcriptional activation.HUA2 transcription factor evm_27.TU.AmTr_v1.0_scaffold00025.84 0.8631088957501101 81 AMTR_s00025p00117140 RNA processing.RNA decay.exosome complex.EXO9 core complex.RRP43 component evm_27.TU.AmTr_v1.0_scaffold00025.108 0.8625177640140578 41 AMTR_s00003p00096050 Nucleotide metabolism.purines.ribonucleotide (RN) anabolism.aminoimidazole RN synthase evm_27.TU.AmTr_v1.0_scaffold00003.59 0.8615526993942518 45 AMTR_s00016p00196390 evm_27.TU.AmTr_v1.0_scaffold00016.161 0.8610686702393792 46 AMTR_s00171p00037720 evm_27.TU.AmTr_v1.0_scaffold00171.15 0.8605738828509322 47 AMTR_s00023p00122200 Cell cycle.interphase.DNA replication.telomere replication.telomerase ribonucleoprotein complex.POT associated factor evm_27.TU.AmTr_v1.0_scaffold00023.64 0.859675167999938 76 AMTR_s00146p00087440 Protein translocation.mitochondrion.inner mitochondrion membrane TIM translocation system.Tim50 component evm_27.TU.AmTr_v1.0_scaffold00146.55 0.8576524849491028 88 AMTR_s00078p00083100 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-5 component evm_27.TU.AmTr_v1.0_scaffold00078.56 0.857449571843373 54 AMTR_s00022p00104360 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT5 regulatory component evm_27.TU.AmTr_v1.0_scaffold00022.94 0.8556313730748959 73 AMTR_s00119p00124540 Protein translocation.mitochondrion.outer mitochondrion membrane TOM translocation system.Tom40 component evm_27.TU.AmTr_v1.0_scaffold00119.97 0.8555378117724975 95 AMTR_s00032p00196980 Chromatin organisation.histone modifications.histone ubiquitination.PRC1 histone mono-ubiquitination complex.modification writer protein components.RING1-type modification writer component evm_27.TU.AmTr_v1.0_scaffold00032.177 0.8536860532656428 63 AMTR_s00014p00247240 evm_27.TU.AmTr_v1.0_scaffold00014.121 0.8535665638243634 64 AMTR_s00013p00217480 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.SR30/34 splicing factor evm_27.TU.AmTr_v1.0_scaffold00013.152 0.8506257574822176 69 AMTR_s00008p00158660 evm_27.TU.AmTr_v1.0_scaffold00008.83 0.8504436142756845 71 AMTR_s00032p00197680 Protein biosynthesis.organelle translation machineries.translation initiation.IF-3 initiation factor evm_27.TU.AmTr_v1.0_scaffold00032.180 0.8500884339928304 92 AMTR_s00044p00111360 evm_27.TU.AmTr_v1.0_scaffold00044.83 0.8499901699851645 74 AMTR_s00013p00091760 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.SWA3/RH36 assembly factor evm_27.TU.AmTr_v1.0_scaffold00013.42 0.8489333389043942 77 AMTR_s00145p00090730 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.lysine.diaminopimelate epimerase evm_27.TU.AmTr_v1.0_scaffold00145.35 0.8487511401044358 79 AMTR_s00098p00093790 evm_27.TU.AmTr_v1.0_scaffold00098.21 0.8485735446695369 81 AMTR_s00041p00191400 Protein MAEA homolog OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00041.164 0.8469186409822627 86 AMTR_s00099p00085080 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00099.64 0.8468819502164288 88 AMTR_s00022p00186280 Protein modification.phosphorylation.NAK kinase evm_27.TU.AmTr_v1.0_scaffold00022.200 0.8440919183027907 98