Sequence Description Alias PCC hrr AMTR_s00042p00226140 evm_27.TU.AmTr_v1.0_scaffold00042.76 0.9575735073929331 2 AMTR_s00103p00143070 Pentatricopeptide repeat-containing protein At3g02330, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00103.100 0.9362971592444342 2 AMTR_s00048p00132600 Pentatricopeptide repeat-containing protein At5g27270 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00048.78 0.9271712192451377 12 AMTR_s00080p00074320 Pentatricopeptide repeat-containing protein At4g26680, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00080.23 0.9263813951973943 25 AMTR_s00092p00052470 Pentatricopeptide repeat-containing protein At1g53600, mitochondrial OS=Arabidopsis thaliana 0.9224981370109718 5 AMTR_s00090p00178540 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.ISE2 RNA helicase evm_27.TU.AmTr_v1.0_scaffold00090.110 0.9209484633526472 20 AMTR_s00012p00252800 Pentatricopeptide repeat-containing protein At4g39530 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00012.262 0.9207626918504379 7 AMTR_s00056p00038090 RNA processing.ribonuclease activities.RNase Z endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00056.21 0.9202968728344251 80 AMTR_s00056p00185560 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.ECB2/VAC1 RNA editing factor 0.9200889994332806 21 AMTR_s00029p00034550 Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.15 0.9176269640996455 10 AMTR_s00029p00206820 RNA processing.RNA decay.exosome complex.associated co-factors.SUPERKILLER (SKI) regulation complex.SKI2 RNA helicase component evm_27.TU.AmTr_v1.0_scaffold00029.298 0.917433752116765 85 AMTR_s00110p00094310 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase evm_27.TU.AmTr_v1.0_scaffold00110.55 0.9152573056452745 17 AMTR_s00055p00196140 Putative DUF21 domain-containing protein At3g13070, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00055.133 0.9149090334935918 91 AMTR_s00085p00089520 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.PIE1 ATPase component evm_27.TU.AmTr_v1.0_scaffold00085.48 0.9147496986147969 38 AMTR_s00085p00105120 Carbohydrate metabolism.starch metabolism.degradation.phosphorylation.GWD glucan, water dikinase evm_27.TU.AmTr_v1.0_scaffold00085.65 0.9134685209085945 15 AMTR_s00078p00176050 Protein modification.phosphorylation.TKL kinase superfamily.LRR-X kinase families.LRR-Xb kinase evm_27.TU.AmTr_v1.0_scaffold00078.169 0.9119444173040923 16 AMTR_s00002p00190720 Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00002.170 0.9111998162075842 17 AMTR_s00049p00131450 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.110 0.9111642195616845 18 AMTR_s00142p00090900 evm_27.TU.AmTr_v1.0_scaffold00142.59 0.9106419041675705 19 AMTR_s00022p00070510 Protein modification.peptide maturation.plastid.SPP stromal processing peptidase evm_27.TU.AmTr_v1.0_scaffold00022.51 0.9104081147410258 30 AMTR_s00088p00046280 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00088.24 0.9101272311211206 21 AMTR_s00019p00238660 Pentatricopeptide repeat-containing protein At1g20300, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00019.342 0.9084329554526206 22 AMTR_s00040p00213060 Protein translocation.chloroplast.inner envelope TIC translocation system.TIC-20 complex.Tic100 component evm_27.TU.AmTr_v1.0_scaffold00040.228 0.9081461039250525 75 AMTR_s00147p00097570 Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00147.54 0.9080906215563574 24 AMTR_s00017p00132450 Protein translocation.chloroplast.inner envelope TIC translocation system.Tic110 component evm_27.TU.AmTr_v1.0_scaffold00017.54 0.90799560442677 71 AMTR_s00029p00219050 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH7/9 component evm_27.TU.AmTr_v1.0_scaffold00029.331 0.9076049180636988 26 AMTR_s00077p00167440 evm_27.TU.AmTr_v1.0_scaffold00077.179 0.9074665218726159 47 AMTR_s00086p00087880 Phytohormones.abscisic acid.synthesis.abscisic aldehyde oxidase evm_27.TU.AmTr_v1.0_scaffold00086.42 0.9065389926859445 28 AMTR_s00049p00223290 Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00049.264 0.9050366346619461 29 AMTR_s00079p00107040 CRM-domain containing factor CFM3, chloroplastic/mitochondrial OS=Zea mays evm_27.TU.AmTr_v1.0_scaffold00079.39 0.9042037275969342 39 AMTR_s00014p00068600 Pentatricopeptide repeat-containing protein At1g43980, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00014.19 0.9032115391873157 31 AMTR_s00062p00195710 Protein degradation.peptidase families.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.FtsH12 component evm_27.TU.AmTr_v1.0_scaffold00062.205 0.9025112881517542 33 AMTR_s00067p00115040 evm_27.TU.AmTr_v1.0_scaffold00067.92 0.8985213418883055 37 AMTR_s00023p00028640 SNF2 domain-containing protein CLASSY 2 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00023.6 0.8968646365239961 55 AMTR_s00092p00109950 Homeobox-DDT domain protein RLT3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00092.68 0.8964858871108754 39 AMTR_s00011p00233950 Pentatricopeptide repeat-containing protein At4g37170 OS=Arabidopsis thaliana 0.8957140371174214 43 AMTR_s00063p00087380 Chromatin organisation.chromatin remodeling complexes.ATPase core components.SSO1653-like group.SHPRH chromatin remodeling factor evm_27.TU.AmTr_v1.0_scaffold00063.12 0.8956880897367556 41 AMTR_s00016p00242080 Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00016.257 0.8945502934943034 44 AMTR_s00029p00034670 Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00029.16 0.8937015253598933 45 AMTR_s00065p00022170 RNA biosynthesis.organelle machineries.RNA polymerase activities.nuclear-encoded organellar RNA polymerase (NEP) evm_27.TU.AmTr_v1.0_scaffold00065.7 0.8933611749101461 55 AMTR_s00064p00187430 GTP-binding protein BRASSINAZOLE INSENSITIVE PALE GREEN 2, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00064.82 0.8928730299732263 47 AMTR_s00101p00112120 Pentatricopeptide repeat-containing protein At4g14170 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00101.85 0.8923442879956335 49 AMTR_s00009p00241540 RNA processing.organelle machineries.ribonuclease activities.RNase J endoribonuclease evm_27.TU.AmTr_v1.0_scaffold00009.218 0.8908234011311225 59 AMTR_s00163p00072710 Protein biosynthesis.aminoacyl-tRNA synthetase activities.phenylalanine-tRNA ligase evm_27.TU.AmTr_v1.0_scaffold00163.29 0.889703464063643 58 AMTR_s00061p00066220 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00061.41 0.8895087581120338 70 AMTR_s00004p00095690 RNA processing.organelle machineries.ribonuclease activities.PNP polynucleotide phosphorylase evm_27.TU.AmTr_v1.0_scaffold00004.78 0.8894048549712986 60 AMTR_s00078p00132750 Protein modification.phosphorylation.atypical kinase families.TAF kinase evm_27.TU.AmTr_v1.0_scaffold00078.111 0.889247931309697 61 AMTR_s00040p00181990 Neutral/alkaline invertase 3, chloroplastic OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00040.175 0.8881953841001958 63 AMTR_s00067p00176230 Splicing factor U2af large subunit A OS=Nicotiana plumbaginifolia evm_27.TU.AmTr_v1.0_scaffold00067.180 0.8880869822789424 65 AMTR_s00045p00114550 RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.CFM3-type splicing factor evm_27.TU.AmTr_v1.0_scaffold00045.110 0.8878355021123118 67 AMTR_s00043p00149000 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00043.28 0.8866862769591024 96 AMTR_s00024p00225420 Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00024.224 0.8866082398039407 71 AMTR_s00004p00128400 Phytohormones.abscisic acid.synthesis.abscisic aldehyde oxidase evm_27.TU.AmTr_v1.0_scaffold00004.118 0.8865430898303495 72 AMTR_s00096p00107320 Coenzyme metabolism.phylloquinone synthesis.1,4-dihydroxy-2-naphthoyl-CoA synthase evm_27.TU.AmTr_v1.0_scaffold00096.66 0.8859722938251713 94 AMTR_s00062p00213230 Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana 0.8847340389244179 87 AMTR_s00006p00243670 Protein modification.phosphorylation.atypical kinase families.ABC1 kinase evm_27.TU.AmTr_v1.0_scaffold00006.123 0.8847200962635783 84 AMTR_s00130p00019530 Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00130.4 0.8846271087199701 86 AMTR_s00011p00266560 RNA processing.organelle machineries.RNA editing.plastidial RNA editing.AEF1 RNA editing factor evm_27.TU.AmTr_v1.0_scaffold00011.231 0.8845493027334835 87 AMTR_s00177p00028500 Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00177.5 0.8842814652979812 88 AMTR_s00033p00140070 evm_27.TU.AmTr_v1.0_scaffold00033.76 0.8832947840221785 89 AMTR_s00089p00070210 Pentatricopeptide repeat-containing protein At5g15280, mitochondrial OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00089.28 0.8821754679122942 92 AMTR_s00058p00186720 Protein KINESIN LIGHT CHAIN-RELATED 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00058.182 0.8818024523057829 93 AMTR_s00354p00009120 RNA biosynthesis.organelle machineries.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essentiell co-factors.PAP3/TAC10 component evm_27.TU.AmTr_v1.0_scaffold00354.1 0.8815241792729928 96 AMTR_s00052p00118920 Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00052.39 0.880596339291297 98 AMTR_s00016p00252780 Pentatricopeptide repeat-containing protein At3g26630, chloroplastic OS=Arabidopsis thaliana 0.8802003868703931 99