Sequence Description Alias PCC hrr AMTR_s00025p00038580 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIh basal transcription factor complex.XPD-type subunit evm_27.TU.AmTr_v1.0_scaffold00025.17 0.9493267476427747 2 AMTR_s00147p00036340 Protein degradation.peptidase families.serine-type peptidase activities.Deg protease evm_27.TU.AmTr_v1.0_scaffold00147.15 0.9490168002979688 3 AMTR_s00076p00078090 Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00076.20 0.9478800441991397 3 AMTR_s00002p00118630 evm_27.TU.AmTr_v1.0_scaffold00002.74 0.9476428021490135 4 AMTR_s00115p00126760 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00115.20 0.9468602358911679 5 AMTR_s00063p00197920 Rho GTPase-activating protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00063.78 0.9466702800454443 6 AMTR_s00039p00226980 evm_27.TU.AmTr_v1.0_scaffold00039.208 0.9460795338717483 7 AMTR_s00088p00115810 Amino acid metabolism.biosynthesis.glutamate family.glutamate-derived amino acids.arginine.argininosuccinate synthetase evm_27.TU.AmTr_v1.0_scaffold00088.82 0.943383427147401 8 AMTR_s00009p00247750 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.CPSF100/Ydh1 component evm_27.TU.AmTr_v1.0_scaffold00009.244 0.9432195907286048 11 AMTR_s00138p00108220 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.TPLATE AP-2 co-adaptor complex.TWD40 component evm_27.TU.AmTr_v1.0_scaffold00138.52 0.9428747037092398 10 AMTR_s00022p00221290 Clustered mitochondria protein OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.278 0.9415144039719507 11 AMTR_s00060p00130340 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.NUP155 scaffold nucleoporin evm_27.TU.AmTr_v1.0_scaffold00060.71 0.9391053531604749 12 AMTR_s00045p00203910 Chromatin organisation.histone modifications.histone arginine methylation.PRMT4 histone methylase evm_27.TU.AmTr_v1.0_scaffold00045.269 0.9390495536929739 13 AMTR_s00087p00144100 Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00087.47 0.9384069099333645 14 AMTR_s00029p00208280 Cell wall.sporopollenin.exine wall formation.DEX1 exine patterning factor evm_27.TU.AmTr_v1.0_scaffold00029.300 0.9379669098616445 15 AMTR_s00002p00145340 Cellular respiration.tricarboxylic acid cycle.mitochondrial NAD-dependent malic enzyme evm_27.TU.AmTr_v1.0_scaffold00002.109 0.9375385370601509 16 AMTR_s00016p00180540 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT2 component evm_27.TU.AmTr_v1.0_scaffold00016.142 0.9366359421688172 26 AMTR_s00003p00020850 Mitochondrial Rho GTPase 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00003.6 0.9362808102426441 18 AMTR_s00050p00180490 Acyl-CoA-binding domain-containing protein 4 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00050.40 0.9359165632703589 19 AMTR_s00060p00151140 Microtubule-associated protein 70-1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00060.89 0.9356731380386228 20 AMTR_s00133p00115730 Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00133.60 0.9354644134089263 21 AMTR_s00001p00272900 Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana 0.9346214232897676 22 AMTR_s00105p00039650 evm_27.TU.AmTr_v1.0_scaffold00105.16 0.9343744921816881 23 AMTR_s00066p00089100 SUPPRESSOR OF ABI3-5 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.69 0.9338726162571792 24 AMTR_s00020p00234520 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease evm_27.TU.AmTr_v1.0_scaffold00020.106 0.9335120549819356 25 AMTR_s00062p00192260 Cytoskeleton.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.NAP1 component evm_27.TU.AmTr_v1.0_scaffold00062.201 0.9330803371907724 26 AMTR_s00176p00054790 Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00176.28 0.9330239648516514 27 AMTR_s00004p00093740 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00004.76 0.9323605367396203 28 AMTR_s00049p00115800 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class III/Trithorax histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00049.91 0.931554434290877 49 AMTR_s00122p00094620 RNA biosynthesis.transcriptional repression.LUG transcriptional co-repressor evm_27.TU.AmTr_v1.0_scaffold00122.38 0.9309157544608023 30 AMTR_s00122p00082000 Cell cycle.cytokinesis.phragmoplast disassembly.Katanin ATP-dependent microtubule severing complex.catalytic component evm_27.TU.AmTr_v1.0_scaffold00122.30 0.9302296774171386 31 AMTR_s00067p00142170 Amino acid metabolism.biosynthesis.glutamate family.histidine.imidazoleglycerol-phosphate synthase evm_27.TU.AmTr_v1.0_scaffold00067.132 0.9299376993054809 32 AMTR_s00025p00221910 External stimuli response.drought.stomatal closure signalling.CAU1 histone methylase evm_27.TU.AmTr_v1.0_scaffold00025.311 0.929699788358567 33 AMTR_s00010p00249970 Chromatin organisation.chromatin remodeling complexes.SWR1 complex.SWC4 recruitment factor evm_27.TU.AmTr_v1.0_scaffold00010.349 0.9295298971084952 34 AMTR_s00164p00059220 Vesicle trafficking.endomembrane trafficking.vacuolar sorting.VSR vacuolar sorting receptor evm_27.TU.AmTr_v1.0_scaffold00164.25 0.9292009870697497 35 AMTR_s00032p00163130 Protein modification.phosphorylation.TKL kinase superfamily.LRR-VIII kinase families.LRR-VIII-2 kinase evm_27.TU.AmTr_v1.0_scaffold00032.136 0.9288814507423659 36 AMTR_s00009p00260060 Solute transport.carrier-mediated transport.CPA superfamily.CPA-2 family.proton:potassium cation antiporter (KEA-type) evm_27.TU.AmTr_v1.0_scaffold00009.318 0.9287191302037396 37 AMTR_s00011p00229900 evm_27.TU.AmTr_v1.0_scaffold00011.109 0.9283605611893453 38 AMTR_s00090p00109700 Lipid metabolism.fatty acid synthesis.mitochondrial Type II fatty acid synthase (mtFAS) system.ketoacyl-ACP synthase (mtKAS) evm_27.TU.AmTr_v1.0_scaffold00090.50 0.9278596051565854 39 AMTR_s00006p00242820 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN1 regulatory component evm_27.TU.AmTr_v1.0_scaffold00006.121 0.9276717512689587 40 AMTR_s00028p00239280 Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica evm_27.TU.AmTr_v1.0_scaffold00028.127 0.9271627760184616 41 AMTR_s00101p00117720 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2B eIF2-GDP recycling complex.eIF2B-gamma evm_27.TU.AmTr_v1.0_scaffold00101.91 0.9268447060357679 42 AMTR_s00003p00122400 Lipid metabolism.lipid degradation.fatty acid degradation.alternative beta-oxidation.monofunctionial hydroxyacyl-CoA dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00003.89 0.926824093427924 43 AMTR_s00019p00154210 RNA processing.RNA splicing.spliceosome-associated non-snRNP factors.RSZ21/22 splicing factor evm_27.TU.AmTr_v1.0_scaffold00019.143 0.9267553090033407 44 AMTR_s00065p00210150 evm_27.TU.AmTr_v1.0_scaffold00065.206 0.9265841212440554 45 AMTR_s00072p00067600 Ubiquitin carboxyl-terminal hydrolase 14 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00072.29 0.9264092761232409 46 AMTR_s00015p00161490 Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00015.32 0.926327686933407 47 AMTR_s00119p00021560 RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor evm_27.TU.AmTr_v1.0_scaffold00119.5 0.9263130473600079 48 AMTR_s00078p00112410 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.L-homocysteine S-methyltransferase activities.cobalamine-independent methionine synthase evm_27.TU.AmTr_v1.0_scaffold00078.85 0.9262190688426124 49 AMTR_s00092p00098010 evm_27.TU.AmTr_v1.0_scaffold00092.55 0.9259341994361294 50 AMTR_s00022p00244130 Outer envelope protein 80, chloroplastic OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00022.358 0.9258014081686594 55 AMTR_s00009p00184050 Protein modification.ADP-ribosylation.poly(ADP-ribose) polymerase (PARP) evm_27.TU.AmTr_v1.0_scaffold00009.114 0.9257021194065315 52 AMTR_s00044p00164390 Histone-binding protein MSI1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00044.179 0.925676682256945 53 AMTR_s00058p00177950 evm_27.TU.AmTr_v1.0_scaffold00058.168 0.9255151396531482 86 AMTR_s00068p00181410 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic subunits.subunit 2 evm_27.TU.AmTr_v1.0_scaffold00068.139 0.9253029519141633 55 AMTR_s00013p00247130 Protein modification.O-linked glycosylation.serine/threonine O-linked glycosylation.SEC N-acetylglucosamine transferase evm_27.TU.AmTr_v1.0_scaffold00013.214 0.9247428531214663 56 AMTR_s00065p00209640 Protein degradation.peptidase families.metallopeptidase activities.aminopeptidase activities.M17 leucyl aminopeptidase (LAP) evm_27.TU.AmTr_v1.0_scaffold00065.204 0.9246069856738773 57 AMTR_s00029p00238480 evm_27.TU.AmTr_v1.0_scaffold00029.400 0.9238403021834982 58 AMTR_s00059p00054360 Cellular respiration.tricarboxylic acid cycle.succinate dehydrogenase complex.SDH1-type flavoprotein component evm_27.TU.AmTr_v1.0_scaffold00059.34 0.9238365017599536 59 AMTR_s00019p00252390 Solute transport.carrier-mediated transport.CDF superfamily.CDF family.putative zinc cation transporter evm_27.TU.AmTr_v1.0_scaffold00019.421 0.9233676262328309 60 AMTR_s00092p00157140 evm_27.TU.AmTr_v1.0_scaffold00092.133 0.9231704983752164 73 AMTR_s00068p00160530 evm_27.TU.AmTr_v1.0_scaffold00068.112 0.9222232477159468 62 AMTR_s00069p00133460 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00069.97 0.9219438025692683 63 AMTR_s00101p00142180 evm_27.TU.AmTr_v1.0_scaffold00101.118 0.921338005329659 84 AMTR_s00066p00084950 ATPase family AAA domain-containing protein At1g05910 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00066.66 0.9211929901638757 65 AMTR_s00039p00148640 Cell cycle.cytokinesis.preprophase microtubule organization.CLASP microtubule orientation regulator evm_27.TU.AmTr_v1.0_scaffold00039.100 0.92066754292148 90 AMTR_s00059p00171720 Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class V/Su(var) histone methyltransferase component evm_27.TU.AmTr_v1.0_scaffold00059.168 0.9204321300202745 68 AMTR_s00182p00037730 Cell cycle.organelle machineries.organelle fission.plastid division.ARC6 FtsZ assembly regulator evm_27.TU.AmTr_v1.0_scaffold00182.17 0.9200495532652394 68 AMTR_s00138p00044110 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.THO subcomplex.THOC2/Tho2 component evm_27.TU.AmTr_v1.0_scaffold00138.19 0.9199801176248701 69 AMTR_s00109p00056900 La protein 1 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00109.42 0.9194460938786598 70 AMTR_s00011p00260650 Protein modification.O-linked glycosylation.hydroxyproline O-linked glycosylation.arabinosyltransferase (XEG113) evm_27.TU.AmTr_v1.0_scaffold00011.193 0.9192915665284447 71 AMTR_s00092p00123760 Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.VPS53/HIT1 component evm_27.TU.AmTr_v1.0_scaffold00092.88 0.9183298151423976 72 AMTR_s00065p00174980 Cell cycle.mitosis and meiosis.sister chromatid separation.cohesin establishment.PDS5 cohesin cofactor evm_27.TU.AmTr_v1.0_scaffold00065.145 0.9181725897875247 73 AMTR_s00004p00261460 Probable protein S-acyltransferase 19 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00004.256 0.9174649181984678 74 AMTR_s00041p00123630 RNA processing.RNA quality control Exon Junction complex (EJC).peripheral components.UPF2 component evm_27.TU.AmTr_v1.0_scaffold00041.92 0.9172609807033978 75 AMTR_s00119p00132020 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class IV ARF-GAP protein evm_27.TU.AmTr_v1.0_scaffold00119.107 0.9166865871290526 90 AMTR_s00002p00088870 Nucleotide metabolism.purines.salvage pathway.IMP dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00002.44 0.916380246190269 77 AMTR_s00009p00263550 ABC transporter F family member 3 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00009.359 0.9162709662349731 78 AMTR_s00062p00101520 Cytoskeleton.microtubular network.microtubule dynamics.SPR2 microtubule-stabilizing factor evm_27.TU.AmTr_v1.0_scaffold00062.74 0.915842660726977 79 AMTR_s00077p00182530 COP1-interacting protein 7 OS=Arabidopsis thaliana evm_27.TU.AmTr_v1.0_scaffold00077.207 0.9158057171315459 80 AMTR_s00003p00233250 evm_27.TU.AmTr_v1.0_scaffold00003.233 0.9155040475399924 81 AMTR_s00012p00217710 RNA processing.RNA decay.deadenylation-dependent mechanism.mRNA deadenylation.CCR4-NOT complex.NOT3/5 component evm_27.TU.AmTr_v1.0_scaffold00012.161 0.9152117586928341 82 AMTR_s00090p00135570 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF6 component evm_27.TU.AmTr_v1.0_scaffold00090.68 0.9151785837742611 83 AMTR_s00096p00094010 Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.DRM2 de novo DNA methylase evm_27.TU.AmTr_v1.0_scaffold00096.44 0.9146726407712484 84 AMTR_s00024p00082030 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group evm_27.TU.AmTr_v1.0_scaffold00024.39 0.9141533510220259 85 AMTR_s00176p00021290 Protein modification.peptide maturation.endomembrane system.gamma secretase complex.NCT component evm_27.TU.AmTr_v1.0_scaffold00176.4 0.9139649885017125 86 AMTR_s00059p00133780 Protein modification.N-linked glycosylation.oligosaccharyl transferase (OST) complex.DGL1 component evm_27.TU.AmTr_v1.0_scaffold00059.112 0.9136910489227161 87 AMTR_s00099p00129340 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).CAND1 adaptor protein exchange factor evm_27.TU.AmTr_v1.0_scaffold00099.115 0.9133199203443282 88 AMTR_s00009p00262150 RNA processing.RNA decay.exosome complex.EXO9 core complex.RRP40 component evm_27.TU.AmTr_v1.0_scaffold00009.345 0.9131974715321868 89 AMTR_s00106p00139270 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT1 alpha subunit evm_27.TU.AmTr_v1.0_scaffold00106.110 0.9131613268813712 90 AMTR_s00065p00134450 Solute transport.primary active transport.P-type ATPase superfamily.P2 family.ECA P2A-type calcium cation-transporting ATPase evm_27.TU.AmTr_v1.0_scaffold00065.91 0.9129154417955503 91 AMTR_s00041p00073060 Amino acid metabolism.biosynthesis.glutamate family.histidine.histidinol dehydrogenase evm_27.TU.AmTr_v1.0_scaffold00041.43 0.9127359895664402 92 AMTR_s00063p00034480 RNA processing.RNA 3-end polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.Pfs2/FY component evm_27.TU.AmTr_v1.0_scaffold00063.6 0.9124661508784166 93 AMTR_s00048p00207080 Cytoskeleton.actin and tubulin folding.post-CCT Tubulin folding pathway.TFC tubulin folding cofactors.TFC-D cofactor evm_27.TU.AmTr_v1.0_scaffold00048.181 0.9120323053070285 94 AMTR_s00007p00148280 Cell cycle.mitosis and meiosis.metaphase to anaphase transition.Anaphase-Promoting Complex/Cyclosome (APC/C)-dependent ubiquitination.APC/C E3 ubiquitin ligase complex.platform subcomplex.APC1 component evm_27.TU.AmTr_v1.0_scaffold00007.111 0.9119071980686476 95 AMTR_s00020p00207770 evm_27.TU.AmTr_v1.0_scaffold00020.85 0.9118602283860175 96 AMTR_s00002p00079350 RNA processing.RNA modification.mRNA methylation.adenosine N6-methyltransferase complex.VIR regulatory component evm_27.TU.AmTr_v1.0_scaffold00002.39 0.9117441798640183 97 AMTR_s00002p00059110 Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.IMB4 import karyopherin evm_27.TU.AmTr_v1.0_scaffold00002.23 0.911417527218621 98 AMTR_s00058p00048170 Amino acid metabolism.biosynthesis.shikimate family.tryptophan.phosphoribosyanthranilate isomerase evm_27.TU.AmTr_v1.0_scaffold00058.19 0.9113217317983835 100